RNA–Protein interactions for RNA: ENST00000449457.1

LINC02561-201, Transcript of long intergenic non-protein coding RNA 2561, humanhuman

TSL 3 BASIC

Gene LINC02561, Length 692 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02561-201ENST00000449457 SCN11AQ9UI33 1791 aa13.71□□□□□ -0.22
LINC02561-201ENST00000449457 NRXN2Q9P2S2 1712 aa13.7□□□□□ -0.22
LINC02561-201ENST00000449457 POTECB2RU33 542 aa13.7□□□□□ -0.22
LINC02561-201ENST00000449457 MTHFSP49914 203 aa13.7□□□□□ -0.22
LINC02561-201ENST00000449457 NFIXQ14938 502 aa13.7□□□□□ -0.22
LINC02561-201ENST00000449457 BICDL1Q6ZP65 573 aa13.7□□□□□ -0.22
LINC02561-201ENST00000449457 ZBTB1Q9Y2K1 713 aa13.7□□□□□ -0.22
LINC02561-201ENST00000449457 SOS1Q07889 1333 aaPredicted RBP13.69□□□□□ -0.22
LINC02561-201ENST00000449457 TM4SF1P30408 202 aa13.69□□□□□ -0.22
LINC02561-201ENST00000449457 BCL2L12Q9HB09 334 aa13.69□□□□□ -0.22
LINC02561-201ENST00000449457 COL15A1P39059 1388 aa13.69□□□□□ -0.22
LINC02561-201ENST00000449457 GLTPD2A6NH11 291 aa13.68□□□□□ -0.22
LINC02561-201ENST00000449457 PLEKHO1Q53GL0 409 aaPredicted RBP13.68□□□□□ -0.22
LINC02561-201ENST00000449457 LMNB1P20700 586 aa13.67□□□□□ -0.22
LINC02561-201ENST00000449457 C1orf141Q5JVX7 400 aa13.67□□□□□ -0.22
LINC02561-201ENST00000449457 SULT6B1Q6IMI4 303 aa13.67□□□□□ -0.22
LINC02561-201ENST00000449457 C2CD5Q86YS7 1000 aa13.67□□□□□ -0.22
LINC02561-201ENST00000449457 LGR6Q9HBX8 967 aa13.67□□□□□ -0.22
LINC02561-201ENST00000449457 C19orf67A6NJJ6 358 aa13.66□□□□□ -0.22
LINC02561-201ENST00000449457 FOXN1O15353 648 aa13.66□□□□□ -0.22
LINC02561-201ENST00000449457 ZPR1O75312 459 aa13.66□□□□□ -0.22
LINC02561-201ENST00000449457 SERPINB2P05120 415 aa13.66□□□□□ -0.22
LINC02561-201ENST00000449457 VEGFAP15692 232 aaPredicted RBP13.66□□□□□ -0.22
LINC02561-201ENST00000449457 HSP90AB1P08238 724 aaKnown RBP13.65□□□□□ -0.22
LINC02561-201ENST00000449457 C21orf2O43822 256 aa13.64□□□□□ -0.23
LINC02561-201ENST00000449457 CYP19A1P11511 503 aaPredicted RBP13.64□□□□□ -0.23
LINC02561-201ENST00000449457 CANXP27824 592 aaKnown RBP13.64□□□□□ -0.23
LINC02561-201ENST00000449457 CDCA8Q53HL2 280 aa13.64□□□□□ -0.23
LINC02561-201ENST00000449457 ZNF622Q969S3 477 aaKnown RBP eCLIP13.64□□□□□ -0.23
LINC02561-201ENST00000449457 ZNF330Q9Y3S2 320 aaPredicted RBP13.64□□□□□ -0.23
LINC02561-201ENST00000449457 FER1L6Q2WGJ9 1857 aa13.63□□□□□ -0.23
LINC02561-201ENST00000449457 SCN7AQ01118 1682 aa13.63□□□□□ -0.23
LINC02561-201ENST00000449457 DDNO94850 711 aaPredicted RBP13.63□□□□□ -0.23
LINC02561-201ENST00000449457 HMOX1P09601 288 aa13.63□□□□□ -0.23
LINC02561-201ENST00000449457 TTLL6Q8N841 843 aa13.63□□□□□ -0.23
LINC02561-201ENST00000449457 SLX4Q8IY92 1834 aa13.62□□□□□ -0.23
LINC02561-201ENST00000449457 MRC1P22897 1456 aa13.62□□□□□ -0.23
LINC02561-201ENST00000449457 TBC1D9BQ66K14 1250 aa13.62□□□□□ -0.23
LINC02561-201ENST00000449457 NARFQ9UHQ1 456 aa13.62□□□□□ -0.23
LINC02561-201ENST00000449457 DICER1Q9UPY3 1922 aaKnown RBP13.62□□□□□ -0.23
LINC02561-201ENST00000449457 ERFEQ4G0M1 354 aa13.61□□□□□ -0.23
LINC02561-201ENST00000449457 AMOTQ4VCS5 1084 aa13.61□□□□□ -0.23
LINC02561-201ENST00000449457 PANK3Q9H999 370 aa13.61□□□□□ -0.23
LINC02561-201ENST00000449457 SLC52A2Q9HAB3 445 aa13.61□□□□□ -0.23
LINC02561-201ENST00000449457 UBR2Q8IWV8 1755 aa13.6□□□□□ -0.23
LINC02561-201ENST00000449457 PIP4K2AP48426 406 aaPredicted RBP13.6□□□□□ -0.23
LINC02561-201ENST00000449457 H0YIN7 160 aa13.59□□□□□ -0.23
LINC02561-201ENST00000449457 RNMTO43148 476 aaKnown RBP13.59□□□□□ -0.23
LINC02561-201ENST00000449457 IL13P35225 146 aa13.59□□□□□ -0.23
LINC02561-201ENST00000449457 OLFM4Q6UX06 510 aa13.59□□□□□ -0.23
LINC02561-201ENST00000449457 SLC51AQ86UW1 340 aa13.59□□□□□ -0.23
LINC02561-201ENST00000449457 PLSCR2Q9NRY7 297 aa13.59□□□□□ -0.23
LINC02561-201ENST00000449457 RYDENQ9NUL5 291 aaKnown RBP13.59□□□□□ -0.23
LINC02561-201ENST00000449457 ZC3H4Q9UPT8 1303 aaKnown RBP13.59□□□□□ -0.23
LINC02561-201ENST00000449457 CNTNAP1P78357 1384 aa13.58□□□□□ -0.23
LINC02561-201ENST00000449457 MORC1Q86VD1 984 aa13.58□□□□□ -0.24
LINC02561-201ENST00000449457 TBC1D2BQ9UPU7 963 aa13.58□□□□□ -0.24
LINC02561-201ENST00000449457 ZNF541Q9H0D2 1346 aa13.58□□□□□ -0.24
LINC02561-201ENST00000449457 VEGFBP49765 207 aa13.57□□□□□ -0.24
LINC02561-201ENST00000449457 CNGB1Q14028 1251 aaPredicted RBP13.57□□□□□ -0.24
LINC02561-201ENST00000449457 AKAP4Q5JQC9 854 aa13.57□□□□□ -0.24
LINC02561-201ENST00000449457 PRR5LQ6MZQ0 368 aa13.57□□□□□ -0.24
LINC02561-201ENST00000449457 LBX1P52954 281 aa13.56□□□□□ -0.24
LINC02561-201ENST00000449457 FMR1Q06787 632 aaKnown RBP eCLIP13.56□□□□□ -0.24
LINC02561-201ENST00000449457 MTHFSDQ2M296 383 aaKnown RBP13.56□□□□□ -0.24
LINC02561-201ENST00000449457 FAM161AQ3B820 660 aa13.56□□□□□ -0.24
LINC02561-201ENST00000449457 EAPPQ56P03 285 aaPredicted RBP13.56□□□□□ -0.24
LINC02561-201ENST00000449457 LHX8Q68G74 356 aa13.56□□□□□ -0.24
LINC02561-201ENST00000449457 MS4A3Q96HJ5 214 aa13.56□□□□□ -0.24
LINC02561-201ENST00000449457 EFCAB3Q8N7B9 438 aa13.55□□□□□ -0.24
LINC02561-201ENST00000449457 MFRPQ9BY79 579 aa13.55□□□□□ -0.24
LINC02561-201ENST00000449457 TAOK3Q9H2K8 898 aa13.55□□□□□ -0.24
LINC02561-201ENST00000449457 TRPC6Q9Y210 931 aa13.55□□□□□ -0.24
LINC02561-201ENST00000449457 BCORQ6W2J9 1755 aa13.55□□□□□ -0.24
LINC02561-201ENST00000449457 ARFGEF2Q9Y6D5 1785 aa13.55□□□□□ -0.24
LINC02561-201ENST00000449457 HSPA5P11021 654 aaKnown RBP13.54□□□□□ -0.24
LINC02561-201ENST00000449457 DPY19L2Q6NUT2 758 aa13.54□□□□□ -0.24
LINC02561-201ENST00000449457 PRPF40BQ6NWY9 871 aaKnown RBP13.54□□□□□ -0.24
LINC02561-201ENST00000449457 PASKQ96RG2 1323 aa13.54□□□□□ -0.24
LINC02561-201ENST00000449457 KCNQ3O43525 872 aa13.53□□□□□ -0.24
LINC02561-201ENST00000449457 EIF5P55010 431 aaKnown RBP13.53□□□□□ -0.24
LINC02561-201ENST00000449457 ZNF277Q9NRM2 450 aaPredicted RBP13.53□□□□□ -0.24
LINC02561-201ENST00000449457 TSKSQ9UJT2 592 aa13.53□□□□□ -0.24
LINC02561-201ENST00000449457 PRAMEF22A3QJZ6 481 aa13.52□□□□□ -0.25
LINC02561-201ENST00000449457 FAM177BA6PVY3 158 aa13.52□□□□□ -0.25
LINC02561-201ENST00000449457 NPHP1O15259 732 aa13.52□□□□□ -0.25
LINC02561-201ENST00000449457 A1BGP04217 495 aa13.52□□□□□ -0.25
LINC02561-201ENST00000449457 GRM1Q13255 1194 aa13.52□□□□□ -0.25
LINC02561-201ENST00000449457 ZNF496Q96IT1 587 aaPredicted RBP13.52□□□□□ -0.25
LINC02561-201ENST00000449457 TAF1DQ9H5J8 278 aaPredicted RBP13.52□□□□□ -0.25
LINC02561-201ENST00000449457 RNF123Q5XPI4 1314 aa13.52□□□□□ -0.25
LINC02561-201ENST00000449457 COL4A5P29400 1685 aa13.52□□□□□ -0.25
LINC02561-201ENST00000449457 SIPA1L3O60292 1781 aaPredicted RBP13.52□□□□□ -0.25
LINC02561-201ENST00000449457 ADAMTSL1Q8N6G6 1762 aa13.52□□□□□ -0.25
LINC02561-201ENST00000449457 LTBP1Q14766 1721 aa13.51□□□□□ -0.25
LINC02561-201ENST00000449457 GABBR2O75899 941 aa13.51□□□□□ -0.25
LINC02561-201ENST00000449457 HSPA8P11142 646 aaKnown RBP13.51□□□□□ -0.25
LINC02561-201ENST00000449457 MAP1SQ66K74 1059 aaPredicted RBP13.51□□□□□ -0.25
LINC02561-201ENST00000449457 CNBD1Q8NA66 436 aa13.51□□□□□ -0.25
LINC02561-201ENST00000449457 AIDAQ96BJ3 306 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms