RNA–Protein interactions for RNA: ENST00000449415.5

RFTN1-205, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 3

Gene RFTN1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-205ENST00000449415 ERBB4Q15303 1308 aa23.38■■□□□ 1.33
RFTN1-205ENST00000449415 NPHP1O15259 732 aa23.38■■□□□ 1.33
RFTN1-205ENST00000449415 ZNF853P0CG23 659 aa23.38■■□□□ 1.33
RFTN1-205ENST00000449415 KCNA3P22001 575 aa23.38■■□□□ 1.33
RFTN1-205ENST00000449415 GNAI1P63096 354 aa23.38■■□□□ 1.33
RFTN1-205ENST00000449415 PROSER3Q2NL68 480 aa23.38■■□□□ 1.33
RFTN1-205ENST00000449415 CLEC4GQ6UXB4 293 aa23.38■■□□□ 1.33
RFTN1-205ENST00000449415 KIF6Q6ZMV9 814 aa23.38■■□□□ 1.33
RFTN1-205ENST00000449415 IFT57Q9NWB7 429 aa23.38■■□□□ 1.33
RFTN1-205ENST00000449415 PDIA6Q15084 440 aa23.37■■□□□ 1.33
RFTN1-205ENST00000449415 PRR5LQ6MZQ0 368 aa23.37■■□□□ 1.33
RFTN1-205ENST00000449415 ZBTB3Q9H5J0 574 aa23.37■■□□□ 1.33
RFTN1-205ENST00000449415 NIP7Q9Y221 180 aaKnown RBP eCLIP23.37■■□□□ 1.33
RFTN1-205ENST00000449415 UTRNP46939 3433 aa23.36■■□□□ 1.33
RFTN1-205ENST00000449415 GOLGB1Q14789 3259 aaKnown RBP23.36■■□□□ 1.33
RFTN1-205ENST00000449415 FAM177BA6PVY3 158 aa23.36■■□□□ 1.33
RFTN1-205ENST00000449415 PIM2Q9P1W9 311 aa23.36■■□□□ 1.33
RFTN1-205ENST00000449415 MAP3K15Q6ZN16 1313 aa23.35■■□□□ 1.33
RFTN1-205ENST00000449415 DUSP27Q5VZP5 1158 aa23.35■■□□□ 1.33
RFTN1-205ENST00000449415 CNBD1Q8NA66 436 aa23.35■■□□□ 1.33
RFTN1-205ENST00000449415 ELL2O00472 640 aaPredicted RBP23.34■■□□□ 1.33
RFTN1-205ENST00000449415 HDGFL1Q5TGJ6 251 aa23.34■■□□□ 1.33
RFTN1-205ENST00000449415 NBPF5PQ86XG9 351 aaPredicted RBP23.34■■□□□ 1.33
RFTN1-205ENST00000449415 C2CD5Q86YS7 1000 aa23.34■■□□□ 1.33
RFTN1-205ENST00000449415 WWC1Q8IX03 1113 aa23.34■■□□□ 1.33
RFTN1-205ENST00000449415 ARFGEF1Q9Y6D6 1849 aa23.33■■□□□ 1.33
RFTN1-205ENST00000449415 DLEC1Q9Y238 1755 aa23.33■■□□□ 1.33
RFTN1-205ENST00000449415 ERVV-1B6SEH8 477 aa23.33■■□□□ 1.33
RFTN1-205ENST00000449415 AIMP1Q12904 312 aaKnown RBP23.33■■□□□ 1.33
RFTN1-205ENST00000449415 CCDC27Q2M243 656 aa23.33■■□□□ 1.33
RFTN1-205ENST00000449415 LRP10Q7Z4F1 713 aa23.33■■□□□ 1.33
RFTN1-205ENST00000449415 CHPF2Q9P2E5 772 aa23.33■■□□□ 1.33
RFTN1-205ENST00000449415 DALRD3Q5D0E6 543 aaKnown RBP23.32■■□□□ 1.32
RFTN1-205ENST00000449415 COL11A2P13942 1736 aaPredicted RBP23.31■■□□□ 1.32
RFTN1-205ENST00000449415 RGL2O15211 777 aa23.31■■□□□ 1.32
RFTN1-205ENST00000449415 HOXB7P09629 217 aa23.31■■□□□ 1.32
RFTN1-205ENST00000449415 GPTP24298 496 aa23.31■■□□□ 1.32
RFTN1-205ENST00000449415 ST5P78524 1137 aa23.31■■□□□ 1.32
RFTN1-205ENST00000449415 XAGE3Q8WTP9 111 aa23.31■■□□□ 1.32
RFTN1-205ENST00000449415 TSR2Q969E8 191 aaKnown RBP23.31■■□□□ 1.32
RFTN1-205ENST00000449415 DDX21Q9NR30 783 aaKnown RBP eCLIP23.31■■□□□ 1.32
RFTN1-205ENST00000449415 H0YIN7 160 aa23.3■■□□□ 1.32
RFTN1-205ENST00000449415 COPS6Q7L5N1 327 aa23.3■■□□□ 1.32
RFTN1-205ENST00000449415 BRIP1Q9BX63 1249 aa23.3■■□□□ 1.32
RFTN1-205ENST00000449415 PDE6BP35913 854 aa23.29■■□□□ 1.32
RFTN1-205ENST00000449415 CACNA1SQ13698 1873 aa23.29■■□□□ 1.32
RFTN1-205ENST00000449415 ARHGAP27Q6ZUM4 889 aa23.29■■□□□ 1.32
RFTN1-205ENST00000449415 C8orf58Q8NAV2 365 aa23.29■■□□□ 1.32
RFTN1-205ENST00000449415 TPTE2Q6XPS3 522 aa23.28■■□□□ 1.32
RFTN1-205ENST00000449415 GIGYF2Q6Y7W6 1299 aaKnown RBP23.28■■□□□ 1.32
RFTN1-205ENST00000449415 ZNF622Q969S3 477 aaKnown RBP eCLIP23.28■■□□□ 1.32
RFTN1-205ENST00000449415 GTF2E1P29083 439 aaPredicted RBP23.27■■□□□ 1.32
RFTN1-205ENST00000449415 ATP10DQ9P241 1426 aa23.26■■□□□ 1.31
RFTN1-205ENST00000449415 DBF4Q9UBU7 674 aaPredicted RBP23.26■■□□□ 1.31
RFTN1-205ENST00000449415 ANKRD36CQ5JPF3 1778 aa23.26■■□□□ 1.31
RFTN1-205ENST00000449415 UBN2Q6ZU65 1347 aa23.26■■□□□ 1.31
RFTN1-205ENST00000449415 NUTM1Q86Y26 1132 aa23.25■■□□□ 1.31
RFTN1-205ENST00000449415 TSPYL6Q8N831 410 aa23.25■■□□□ 1.31
RFTN1-205ENST00000449415 TTLL6Q8N841 843 aa23.25■■□□□ 1.31
RFTN1-205ENST00000449415 ZNF784Q8NCA9 323 aaPredicted RBP23.25■■□□□ 1.31
RFTN1-205ENST00000449415 NCBP3Q53F19 620 aaKnown RBP23.24■■□□□ 1.31
RFTN1-205ENST00000449415 SUSD4Q5VX71 490 aa23.24■■□□□ 1.31
RFTN1-205ENST00000449415 ZNF34Q8IZ26 560 aa23.24■■□□□ 1.31
RFTN1-205ENST00000449415 NYXQ9GZU5 481 aa23.23■■□□□ 1.31
RFTN1-205ENST00000449415 ZNF219Q9P2Y4 722 aaPredicted RBP23.23■■□□□ 1.31
RFTN1-205ENST00000449415 PDZRN3Q9UPQ7 1066 aa23.23■■□□□ 1.31
RFTN1-205ENST00000449415 IL16Q14005 1332 aa23.23■■□□□ 1.31
RFTN1-205ENST00000449415 ERFEQ4G0M1 354 aa23.22■■□□□ 1.31
RFTN1-205ENST00000449415 WDR63Q8IWG1 891 aa23.22■■□□□ 1.31
RFTN1-205ENST00000449415 HYPKQ9NX55 129 aa23.22■■□□□ 1.31
RFTN1-205ENST00000449415 TNRC6CQ9HCJ0 1690 aaKnown RBP23.22■■□□□ 1.31
RFTN1-205ENST00000449415 ABCC12Q96J65 1359 aa23.21■■□□□ 1.31
RFTN1-205ENST00000449415 SLX4Q8IY92 1834 aa23.2■■□□□ 1.3
RFTN1-205ENST00000449415 FANCIQ9NVI1 1328 aa23.2■■□□□ 1.3
RFTN1-205ENST00000449415 TCERG1O14776 1098 aaKnown RBP23.2■■□□□ 1.3
RFTN1-205ENST00000449415 SRGNP10124 158 aa23.2■■□□□ 1.3
RFTN1-205ENST00000449415 ZNF428Q96B54 188 aa23.2■■□□□ 1.3
RFTN1-205ENST00000449415 PHAXQ9H814 394 aaKnown RBP23.2■■□□□ 1.3
RFTN1-205ENST00000449415 CCDC30Q5VVM6 783 aa23.19■■□□□ 1.3
RFTN1-205ENST00000449415 ANKRD13DQ6ZTN6 518 aa23.19■■□□□ 1.3
RFTN1-205ENST00000449415 PPP1R42Q7Z4L9 355 aa23.19■■□□□ 1.3
RFTN1-205ENST00000449415 PLBD2Q8NHP8 589 aa23.19■■□□□ 1.3
RFTN1-205ENST00000449415 MASTLQ96GX5 879 aa23.19■■□□□ 1.3
RFTN1-205ENST00000449415 ARFGEF2Q9Y6D5 1785 aa23.19■■□□□ 1.3
RFTN1-205ENST00000449415 NTSR2O95665 410 aa23.18■■□□□ 1.3
RFTN1-205ENST00000449415 TCIRG1Q13488 830 aa23.18■■□□□ 1.3
RFTN1-205ENST00000449415 TWISTNBQ3B726 338 aaPredicted RBP23.18■■□□□ 1.3
RFTN1-205ENST00000449415 PARP10Q53GL7 1025 aa23.18■■□□□ 1.3
RFTN1-205ENST00000449415 HSP90AB3PQ58FF7 597 aa23.18■■□□□ 1.3
RFTN1-205ENST00000449415 STYK1Q6J9G0 422 aa23.18■■□□□ 1.3
RFTN1-205ENST00000449415 SPINK5Q9NQ38 1064 aaPredicted RBP23.18■■□□□ 1.3
RFTN1-205ENST00000449415 SBF1O95248 1867 aa23.17■■□□□ 1.3
RFTN1-205ENST00000449415 CNKSR1Q969H4 720 aa23.17■■□□□ 1.3
RFTN1-205ENST00000449415 CCDC88AQ3V6T2 1871 aa23.17■■□□□ 1.3
RFTN1-205ENST00000449415 IBTKQ9P2D0 1353 aaPredicted RBP23.16■■□□□ 1.3
RFTN1-205ENST00000449415 CCER2I3L3R5 266 aa23.16■■□□□ 1.3
RFTN1-205ENST00000449415 C21orf2O43822 256 aa23.16■■□□□ 1.3
RFTN1-205ENST00000449415 NPR1P16066 1061 aa23.16■■□□□ 1.3
RFTN1-205ENST00000449415 RASSF7Q02833 373 aa23.16■■□□□ 1.3
RFTN1-205ENST00000449415 NLRP10Q86W26 655 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms