RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 TSPYL6Q8N831 410 aa18.08■□□□□ 0.48
GTF3C3-206ENST00000448539 E9PSI1 815 aa18.07■□□□□ 0.48
GTF3C3-206ENST00000448539 NFIXQ14938 502 aa18.07■□□□□ 0.48
GTF3C3-206ENST00000448539 NLGN2Q8NFZ4 835 aa18.07■□□□□ 0.48
GTF3C3-206ENST00000448539 SPINK5Q9NQ38 1064 aaPredicted RBP18.07■□□□□ 0.48
GTF3C3-206ENST00000448539 MAP3K15Q6ZN16 1313 aa18.06■□□□□ 0.48
GTF3C3-206ENST00000448539 ERVV-1B6SEH8 477 aa18.06■□□□□ 0.48
GTF3C3-206ENST00000448539 RGL2O15211 777 aa18.06■□□□□ 0.48
GTF3C3-206ENST00000448539 EXOSC9Q06265 439 aaKnown RBP18.06■□□□□ 0.48
GTF3C3-206ENST00000448539 AIMP1Q12904 312 aaKnown RBP18.06■□□□□ 0.48
GTF3C3-206ENST00000448539 GPR162Q16538 588 aa18.06■□□□□ 0.48
GTF3C3-206ENST00000448539 TBC1D9BQ66K14 1250 aa18.06■□□□□ 0.48
GTF3C3-206ENST00000448539 TTLL7Q6ZT98 887 aa18.06■□□□□ 0.48
GTF3C3-206ENST00000448539 SETDB2Q96T68 719 aa18.06■□□□□ 0.48
GTF3C3-206ENST00000448539 STK31Q9BXU1 1019 aa18.06■□□□□ 0.48
GTF3C3-206ENST00000448539 HYPKQ9NX55 129 aa18.06■□□□□ 0.48
GTF3C3-206ENST00000448539 CD2APQ9Y5K6 639 aa18.06■□□□□ 0.48
GTF3C3-206ENST00000448539 POLRMTO00411 1230 aaKnown RBP18.05■□□□□ 0.48
GTF3C3-206ENST00000448539 NPHP1O15259 732 aa18.05■□□□□ 0.48
GTF3C3-206ENST00000448539 HNRNPUQ00839 825 aaKnown RBP eCLIP18.05■□□□□ 0.48
GTF3C3-206ENST00000448539 DDR1Q08345 913 aa18.05■□□□□ 0.48
GTF3C3-206ENST00000448539 COPS6Q7L5N1 327 aa18.05■□□□□ 0.48
GTF3C3-206ENST00000448539 XAGE3Q8WTP9 111 aa18.05■□□□□ 0.48
GTF3C3-206ENST00000448539 ZBTB3Q9H5J0 574 aa18.05■□□□□ 0.48
GTF3C3-206ENST00000448539 CHD4Q14839 1912 aa18.04■□□□□ 0.48
GTF3C3-206ENST00000448539 SERPINB2P05120 415 aa18.04■□□□□ 0.48
GTF3C3-206ENST00000448539 LRP10Q7Z4F1 713 aa18.04■□□□□ 0.48
GTF3C3-206ENST00000448539 SCN7AQ01118 1682 aa18.03■□□□□ 0.48
GTF3C3-206ENST00000448539 HLFQ16534 295 aa18.03■□□□□ 0.48
GTF3C3-206ENST00000448539 PELP1Q8IZL8 1130 aaKnown RBP18.03■□□□□ 0.48
GTF3C3-206ENST00000448539 CARMIL3Q8ND23 1372 aa18.03■□□□□ 0.48
GTF3C3-206ENST00000448539 SLFN5Q08AF3 891 aa18.02■□□□□ 0.48
GTF3C3-206ENST00000448539 NIP7Q9Y221 180 aaKnown RBP eCLIP18.02■□□□□ 0.48
GTF3C3-206ENST00000448539 VAMP4O75379 141 aa18.01■□□□□ 0.47
GTF3C3-206ENST00000448539 GIGYF2Q6Y7W6 1299 aaKnown RBP18.01■□□□□ 0.47
GTF3C3-206ENST00000448539 TCERG1O14776 1098 aaKnown RBP18■□□□□ 0.47
GTF3C3-206ENST00000448539 HSP90AB3PQ58FF7 597 aa18■□□□□ 0.47
GTF3C3-206ENST00000448539 ANKRD13DQ6ZTN6 518 aa18■□□□□ 0.47
GTF3C3-206ENST00000448539 NBPF5PQ86XG9 351 aaPredicted RBP18■□□□□ 0.47
GTF3C3-206ENST00000448539 ZNF784Q8NCA9 323 aaPredicted RBP18■□□□□ 0.47
GTF3C3-206ENST00000448539 PLBD2Q8NHP8 589 aa18■□□□□ 0.47
GTF3C3-206ENST00000448539 CDCA7LQ96GN5 454 aa18■□□□□ 0.47
GTF3C3-206ENST00000448539 BCORQ6W2J9 1755 aa17.99■□□□□ 0.47
GTF3C3-206ENST00000448539 DDX58O95786 925 aaKnown RBP17.99■□□□□ 0.47
GTF3C3-206ENST00000448539 SLC4A2P04920 1241 aa17.99■□□□□ 0.47
GTF3C3-206ENST00000448539 CNBD1Q8NA66 436 aa17.99■□□□□ 0.47
GTF3C3-206ENST00000448539 PHAXQ9H814 394 aaKnown RBP17.99■□□□□ 0.47
GTF3C3-206ENST00000448539 C10orf71Q711Q0 1435 aa17.98■□□□□ 0.47
GTF3C3-206ENST00000448539 FAM177BA6PVY3 158 aa17.98■□□□□ 0.47
GTF3C3-206ENST00000448539 GTF2E1P29083 439 aaPredicted RBP17.98■□□□□ 0.47
GTF3C3-206ENST00000448539 TGFB2P61812 414 aa17.98■□□□□ 0.47
GTF3C3-206ENST00000448539 ST5P78524 1137 aa17.98■□□□□ 0.47
GTF3C3-206ENST00000448539 TPTE2Q6XPS3 522 aa17.98■□□□□ 0.47
GTF3C3-206ENST00000448539 ATP10DQ9P241 1426 aa17.98■□□□□ 0.47
GTF3C3-206ENST00000448539 YBX3P16989 372 aaKnown RBP eCLIP17.97■□□□□ 0.475e-8■□□□□ 8.5
GTF3C3-206ENST00000448539 GPTP24298 496 aa17.97■□□□□ 0.47
GTF3C3-206ENST00000448539 RIC3Q7Z5B4 369 aa17.97■□□□□ 0.47
GTF3C3-206ENST00000448539 NYXQ9GZU5 481 aa17.97■□□□□ 0.47
GTF3C3-206ENST00000448539 PARP10Q53GL7 1025 aa17.96■□□□□ 0.47
GTF3C3-206ENST00000448539 PRR5LQ6MZQ0 368 aa17.96■□□□□ 0.47
GTF3C3-206ENST00000448539 TCIRG1Q13488 830 aa17.95■□□□□ 0.46
GTF3C3-206ENST00000448539 PPP1R42Q7Z4L9 355 aa17.95■□□□□ 0.46
GTF3C3-206ENST00000448539 ZNF34Q8IZ26 560 aa17.95■□□□□ 0.46
GTF3C3-206ENST00000448539 A0A0G2JLW4 131 aa17.94■□□□□ 0.46
GTF3C3-206ENST00000448539 TRMT2AQ8IZ69 625 aaKnown RBP17.94■□□□□ 0.46
GTF3C3-206ENST00000448539 BRIP1Q9BX63 1249 aa17.94■□□□□ 0.46
GTF3C3-206ENST00000448539 DPEP1P16444 411 aa17.93■□□□□ 0.46
GTF3C3-206ENST00000448539 PDE6BP35913 854 aa17.93■□□□□ 0.46
GTF3C3-206ENST00000448539 SUSD4Q5VX71 490 aa17.93■□□□□ 0.46
GTF3C3-206ENST00000448539 CCDC24Q8N4L8 307 aa17.93■□□□□ 0.46
GTF3C3-206ENST00000448539 PDZRN3Q9UPQ7 1066 aa17.93■□□□□ 0.46
GTF3C3-206ENST00000448539 ZBED9Q6R2W3 1325 aa17.93■□□□□ 0.46
GTF3C3-206ENST00000448539 GRIN3BO60391 1043 aa17.92■□□□□ 0.46
GTF3C3-206ENST00000448539 FLIIQ13045 1269 aa17.92■□□□□ 0.46
GTF3C3-206ENST00000448539 FKBP5Q13451 457 aaPredicted RBP17.92■□□□□ 0.46
GTF3C3-206ENST00000448539 KSR2Q6VAB6 950 aa17.92■□□□□ 0.46
GTF3C3-206ENST00000448539 ZNF428Q96B54 188 aa17.92■□□□□ 0.46
GTF3C3-206ENST00000448539 UTP14AQ9BVJ6 771 aaKnown RBP17.92■□□□□ 0.46
GTF3C3-206ENST00000448539 PXDNLA1KZ92 1463 aa17.92■□□□□ 0.46
GTF3C3-206ENST00000448539 UBN2Q6ZU65 1347 aa17.92■□□□□ 0.46
GTF3C3-206ENST00000448539 NUP98P52948 1817 aa17.91■□□□□ 0.46
GTF3C3-206ENST00000448539 H0YIN7 160 aa17.91■□□□□ 0.46
GTF3C3-206ENST00000448539 CT47B1P0C2W7 299 aaPredicted RBP17.91■□□□□ 0.46
GTF3C3-206ENST00000448539 G2E3Q7L622 706 aa17.91■□□□□ 0.46
GTF3C3-206ENST00000448539 C2CD5Q86YS7 1000 aa17.91■□□□□ 0.46
GTF3C3-206ENST00000448539 WWC3Q9ULE0 1092 aa17.91■□□□□ 0.46
GTF3C3-206ENST00000448539 MAP3K2Q9Y2U5 619 aa17.91■□□□□ 0.46
GTF3C3-206ENST00000448539 NRXN2Q9P2S2 1712 aa17.91■□□□□ 0.46
GTF3C3-206ENST00000448539 AFDNP55196 1824 aaKnown RBP17.91■□□□□ 0.46
GTF3C3-206ENST00000448539 IBTKQ9P2D0 1353 aaPredicted RBP17.91■□□□□ 0.46
GTF3C3-206ENST00000448539 PI4KAP2A4QPH2 592 aa17.9■□□□□ 0.46
GTF3C3-206ENST00000448539 ATP5J2-PTCD1G3V325 749 aa17.9■□□□□ 0.46
GTF3C3-206ENST00000448539 CHRNA5P30532 468 aa17.9■□□□□ 0.46
GTF3C3-206ENST00000448539 NEXNQ0ZGT2 675 aa17.9■□□□□ 0.46
GTF3C3-206ENST00000448539 NLRP10Q86W26 655 aa17.9■□□□□ 0.46
GTF3C3-206ENST00000448539 NUTM1Q86Y26 1132 aa17.9■□□□□ 0.46
GTF3C3-206ENST00000448539 PI4KAP1Q8N8J0 262 aa17.9■□□□□ 0.46
GTF3C3-206ENST00000448539 MYD88Q99836 296 aa17.9■□□□□ 0.46
GTF3C3-206ENST00000448539 PIM2Q9P1W9 311 aa17.9■□□□□ 0.46
GTF3C3-206ENST00000448539 KIF13BQ9NQT8 1826 aa17.89■□□□□ 0.45
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