RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 EXOSC9Q06265 439 aaKnown RBP16.85■□□□□ 0.29
ERGIC3-209ENST00000447986 SLFN5Q08AF3 891 aa16.85■□□□□ 0.29
ERGIC3-209ENST00000447986 TSPYL6Q8N831 410 aa16.85■□□□□ 0.29
ERGIC3-209ENST00000447986 STK31Q9BXU1 1019 aa16.85■□□□□ 0.29
ERGIC3-209ENST00000447986 HYPKQ9NX55 129 aa16.85■□□□□ 0.29
ERGIC3-209ENST00000447986 PDIA6Q15084 440 aa16.84■□□□□ 0.29
ERGIC3-209ENST00000447986 SGIP1Q9BQI5 828 aa16.84■□□□□ 0.29
ERGIC3-209ENST00000447986 RGL2O15211 777 aa16.83■□□□□ 0.28
ERGIC3-209ENST00000447986 CLEC4GQ6UXB4 293 aa16.83■□□□□ 0.28
ERGIC3-209ENST00000447986 PARP3Q9Y6F1 533 aa16.83■□□□□ 0.28
ERGIC3-209ENST00000447986 CAMTA2O94983 1202 aa16.82■□□□□ 0.28
ERGIC3-209ENST00000447986 MMP10P09238 476 aa16.82■□□□□ 0.28
ERGIC3-209ENST00000447986 ERVV-1B6SEH8 477 aa16.81■□□□□ 0.28
ERGIC3-209ENST00000447986 ANXA1P04083 346 aa16.81■□□□□ 0.28
ERGIC3-209ENST00000447986 PROSER3Q2NL68 480 aa16.81■□□□□ 0.28
ERGIC3-209ENST00000447986 CDCA7LQ96GN5 454 aa16.81■□□□□ 0.28
ERGIC3-209ENST00000447986 ZBED9Q6R2W3 1325 aa16.81■□□□□ 0.28
ERGIC3-209ENST00000447986 VAMP4O75379 141 aa16.81■□□□□ 0.28
ERGIC3-209ENST00000447986 AIMP1Q12904 312 aaKnown RBP16.81■□□□□ 0.28
ERGIC3-209ENST00000447986 COL24A1Q17RW2 1714 aa16.81■□□□□ 0.28
ERGIC3-209ENST00000447986 MAP3K15Q6ZN16 1313 aa16.81■□□□□ 0.28
ERGIC3-209ENST00000447986 COPS6Q7L5N1 327 aa16.81■□□□□ 0.28
ERGIC3-209ENST00000447986 BCL2L12Q9HB09 334 aa16.81■□□□□ 0.28
ERGIC3-209ENST00000447986 SCN7AQ01118 1682 aa16.8■□□□□ 0.28
ERGIC3-209ENST00000447986 TTLL7Q6ZT98 887 aa16.8■□□□□ 0.28
ERGIC3-209ENST00000447986 LRP10Q7Z4F1 713 aa16.8■□□□□ 0.28
ERGIC3-209ENST00000447986 XAGE3Q8WTP9 111 aa16.8■□□□□ 0.28
ERGIC3-209ENST00000447986 BICDL1Q6ZP65 573 aa16.79■□□□□ 0.28
ERGIC3-209ENST00000447986 SETDB2Q96T68 719 aa16.79■□□□□ 0.28
ERGIC3-209ENST00000447986 ZBTB3Q9H5J0 574 aa16.79■□□□□ 0.28
ERGIC3-209ENST00000447986 TM4SF1P30408 202 aa16.78■□□□□ 0.28
ERGIC3-209ENST00000447986 NFIXQ14938 502 aa16.78■□□□□ 0.28
ERGIC3-209ENST00000447986 TBC1D9BQ66K14 1250 aa16.78■□□□□ 0.28
ERGIC3-209ENST00000447986 TRMT2AQ8IZ69 625 aaKnown RBP16.78■□□□□ 0.28
ERGIC3-209ENST00000447986 KLHL34Q8N239 644 aa16.78■□□□□ 0.28
ERGIC3-209ENST00000447986 DDX58O95786 925 aaKnown RBP16.78■□□□□ 0.28
ERGIC3-209ENST00000447986 ZNF428Q96B54 188 aa16.78■□□□□ 0.28
ERGIC3-209ENST00000447986 BCORQ6W2J9 1755 aa16.77■□□□□ 0.28
ERGIC3-209ENST00000447986 CARMIL3Q8ND23 1372 aa16.77■□□□□ 0.28
ERGIC3-209ENST00000447986 NPHP1O15259 732 aa16.77■□□□□ 0.27
ERGIC3-209ENST00000447986 CT47B1P0C2W7 299 aaPredicted RBP16.77■□□□□ 0.27
ERGIC3-209ENST00000447986 HSP90AB3PQ58FF7 597 aa16.77■□□□□ 0.27
ERGIC3-209ENST00000447986 GIGYF2Q6Y7W6 1299 aaKnown RBP16.77■□□□□ 0.27
ERGIC3-209ENST00000447986 ANKRD13DQ6ZTN6 518 aa16.77■□□□□ 0.27
ERGIC3-209ENST00000447986 POLRMTO00411 1230 aaKnown RBP16.76■□□□□ 0.27
ERGIC3-209ENST00000447986 TCERG1O14776 1098 aaKnown RBP16.76■□□□□ 0.27
ERGIC3-209ENST00000447986 HLFQ16534 295 aa16.76■□□□□ 0.27
ERGIC3-209ENST00000447986 PLBD2Q8NHP8 589 aa16.76■□□□□ 0.27
ERGIC3-209ENST00000447986 FHDC1Q9C0D6 1143 aaPredicted RBP16.76■□□□□ 0.27
ERGIC3-209ENST00000447986 NIP7Q9Y221 180 aaKnown RBP eCLIP16.76■□□□□ 0.27
ERGIC3-209ENST00000447986 SERPINB2P05120 415 aa16.75■□□□□ 0.27
ERGIC3-209ENST00000447986 DDR1Q08345 913 aa16.75■□□□□ 0.27
ERGIC3-209ENST00000447986 RIC3Q7Z5B4 369 aa16.75■□□□□ 0.27
ERGIC3-209ENST00000447986 PHAXQ9H814 394 aaKnown RBP16.75■□□□□ 0.27
ERGIC3-209ENST00000447986 CD2APQ9Y5K6 639 aa16.74■□□□□ 0.27
ERGIC3-209ENST00000447986 ATP10DQ9P241 1426 aa16.74■□□□□ 0.27
ERGIC3-209ENST00000447986 NBPF5PQ86XG9 351 aaPredicted RBP16.73■□□□□ 0.27
ERGIC3-209ENST00000447986 SYT17Q9BSW7 474 aa16.73■□□□□ 0.27
ERGIC3-209ENST00000447986 FLIIQ13045 1269 aa16.72■□□□□ 0.27
ERGIC3-209ENST00000447986 PARP10Q53GL7 1025 aa16.72■□□□□ 0.27
ERGIC3-209ENST00000447986 TPTE2Q6XPS3 522 aa16.72■□□□□ 0.27
ERGIC3-209ENST00000447986 CNBD1Q8NA66 436 aa16.72■□□□□ 0.27
ERGIC3-209ENST00000447986 NYXQ9GZU5 481 aa16.72■□□□□ 0.27
ERGIC3-209ENST00000447986 GPTP24298 496 aa16.71■□□□□ 0.27
ERGIC3-209ENST00000447986 GTF2E1P29083 439 aaPredicted RBP16.71■□□□□ 0.27
ERGIC3-209ENST00000447986 ST5P78524 1137 aa16.71■□□□□ 0.27
ERGIC3-209ENST00000447986 TCIRG1Q13488 830 aa16.71■□□□□ 0.27
ERGIC3-209ENST00000447986 ALDH1L2Q3SY69 923 aa16.71■□□□□ 0.27
ERGIC3-209ENST00000447986 FKBP5Q13451 457 aaPredicted RBP16.7■□□□□ 0.26
ERGIC3-209ENST00000447986 KSR2Q6VAB6 950 aa16.7■□□□□ 0.26
ERGIC3-209ENST00000447986 PPP1R42Q7Z4L9 355 aa16.7■□□□□ 0.26
ERGIC3-209ENST00000447986 ZNF34Q8IZ26 560 aa16.7■□□□□ 0.26
ERGIC3-209ENST00000447986 C10orf71Q711Q0 1435 aa16.7■□□□□ 0.26
ERGIC3-209ENST00000447986 TGFB2P61812 414 aa16.7■□□□□ 0.26
ERGIC3-209ENST00000447986 PI4KAP2A4QPH2 592 aa16.69■□□□□ 0.26
ERGIC3-209ENST00000447986 FAM177BA6PVY3 158 aa16.69■□□□□ 0.26
ERGIC3-209ENST00000447986 NEXNQ0ZGT2 675 aa16.69■□□□□ 0.26
ERGIC3-209ENST00000447986 PRR5LQ6MZQ0 368 aa16.69■□□□□ 0.26
ERGIC3-209ENST00000447986 G2E3Q7L622 706 aa16.69■□□□□ 0.26
ERGIC3-209ENST00000447986 PI4KAP1Q8N8J0 262 aa16.69■□□□□ 0.26
ERGIC3-209ENST00000447986 MAP3K2Q9Y2U5 619 aa16.69■□□□□ 0.26
ERGIC3-209ENST00000447986 NUP98P52948 1817 aa16.69■□□□□ 0.26
ERGIC3-209ENST00000447986 IBTKQ9P2D0 1353 aaPredicted RBP16.68■□□□□ 0.26
ERGIC3-209ENST00000447986 SMC4Q9NTJ3 1288 aa16.68■□□□□ 0.26
ERGIC3-209ENST00000447986 SSH1Q8WYL5 1049 aa16.67■□□□□ 0.26
ERGIC3-209ENST00000447986 METTL22Q9BUU2 404 aaPredicted RBP16.67■□□□□ 0.26
ERGIC3-209ENST00000447986 NRXN2Q9P2S2 1712 aa16.67■□□□□ 0.26
ERGIC3-209ENST00000447986 RNF123Q5XPI4 1314 aa16.67■□□□□ 0.26
ERGIC3-209ENST00000447986 UBN2Q6ZU65 1347 aa16.67■□□□□ 0.26
ERGIC3-209ENST00000447986 PDE6BP35913 854 aa16.67■□□□□ 0.26
ERGIC3-209ENST00000447986 NLRP10Q86W26 655 aa16.67■□□□□ 0.26
ERGIC3-209ENST00000447986 MRPL50Q8N5N7 158 aaKnown RBP16.67■□□□□ 0.26
ERGIC3-209ENST00000447986 YTHDC1Q96MU7 727 aaKnown RBP16.67■□□□□ 0.26
ERGIC3-209ENST00000447986 MYD88Q99836 296 aa16.67■□□□□ 0.26
ERGIC3-209ENST00000447986 UTP14AQ9BVJ6 771 aaKnown RBP16.67■□□□□ 0.26
ERGIC3-209ENST00000447986 BRIP1Q9BX63 1249 aa16.67■□□□□ 0.26
ERGIC3-209ENST00000447986 PDZRN3Q9UPQ7 1066 aa16.67■□□□□ 0.26
ERGIC3-209ENST00000447986 CACNA1FO60840 1977 aa16.66■□□□□ 0.26
ERGIC3-209ENST00000447986 SPDYE4A6NLX3 237 aa16.66■□□□□ 0.26
ERGIC3-209ENST00000447986 SUSD4Q5VX71 490 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms