RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 SNRPA1P09661 255 aaKnown RBP19.82■□□□□ 0.76
OTUB1-204ENST00000447683 SSFA2P28290 1259 aa19.82■□□□□ 0.76
OTUB1-204ENST00000447683 RIC3Q7Z5B4 369 aa19.82■□□□□ 0.76
OTUB1-204ENST00000447683 LAMB4A4D0S4 1761 aa19.82■□□□□ 0.76
OTUB1-204ENST00000447683 OS9Q13438 667 aaPredicted RBP19.82■□□□□ 0.76
OTUB1-204ENST00000447683 CLASRPQ8N2M8 674 aaKnown RBP19.82■□□□□ 0.76
OTUB1-204ENST00000447683 GLI3P10071 1580 aa19.82■□□□□ 0.76
OTUB1-204ENST00000447683 CYP2E1P05181 493 aaPredicted RBP19.81■□□□□ 0.76
OTUB1-204ENST00000447683 MCM2P49736 904 aa19.81■□□□□ 0.76
OTUB1-204ENST00000447683 NUCB2P80303 420 aa19.81■□□□□ 0.76
OTUB1-204ENST00000447683 CNTROBQ8N137 903 aa19.81■□□□□ 0.76
OTUB1-204ENST00000447683 IL25Q9H293 177 aa19.81■□□□□ 0.76
OTUB1-204ENST00000447683 PALD1Q9ULE6 856 aa19.81■□□□□ 0.76
OTUB1-204ENST00000447683 GLRX3O76003 335 aaKnown RBP19.81■□□□□ 0.76
OTUB1-204ENST00000447683 L1TD1Q5T7N2 865 aaKnown RBP19.81■□□□□ 0.76
OTUB1-204ENST00000447683 TTC5Q8N0Z6 440 aa19.81■□□□□ 0.76
OTUB1-204ENST00000447683 XAGE3Q8WTP9 111 aa19.81■□□□□ 0.76
OTUB1-204ENST00000447683 METTL22Q9BUU2 404 aaPredicted RBP19.81■□□□□ 0.76
OTUB1-204ENST00000447683 FSD2A1L4K1 749 aa19.8■□□□□ 0.76
OTUB1-204ENST00000447683 NEURL1BA8MQ27 555 aa19.8■□□□□ 0.76
OTUB1-204ENST00000447683 NEK4P51957 841 aa19.8■□□□□ 0.76
OTUB1-204ENST00000447683 COPS6Q7L5N1 327 aa19.8■□□□□ 0.76
OTUB1-204ENST00000447683 VSIG10Q8N0Z9 540 aa19.8■□□□□ 0.76
OTUB1-204ENST00000447683 FMNL2Q96PY5 1086 aa19.8■□□□□ 0.76
OTUB1-204ENST00000447683 BRPF3Q9ULD4 1205 aa19.8■□□□□ 0.76
OTUB1-204ENST00000447683 PA2G4Q9UQ80 394 aaKnown RBP19.8■□□□□ 0.76
OTUB1-204ENST00000447683 SOS2Q07890 1332 aaPredicted RBP19.8■□□□□ 0.76
OTUB1-204ENST00000447683 SGSM2O43147 1006 aa19.8■□□□□ 0.76
OTUB1-204ENST00000447683 MYL6BP14649 208 aa19.8■□□□□ 0.76
OTUB1-204ENST00000447683 NEXNQ0ZGT2 675 aa19.8■□□□□ 0.76
OTUB1-204ENST00000447683 BICC1Q9H694 974 aaKnown RBP19.8■□□□□ 0.76
OTUB1-204ENST00000447683 USP16Q9Y5T5 823 aa19.8■□□□□ 0.76
OTUB1-204ENST00000447683 WDR17Q8IZU2 1322 aa19.79■□□□□ 0.76
OTUB1-204ENST00000447683 MAP4K4O95819 1239 aaPredicted RBP19.79■□□□□ 0.76
OTUB1-204ENST00000447683 GCKRQ14397 625 aa19.79■□□□□ 0.76
OTUB1-204ENST00000447683 SKOR2Q2VWA4 1001 aaPredicted RBP19.79■□□□□ 0.76
OTUB1-204ENST00000447683 ARFGEF2Q9Y6D5 1785 aa19.78■□□□□ 0.76
OTUB1-204ENST00000447683 AFDNP55196 1824 aaKnown RBP19.78■□□□□ 0.76
OTUB1-204ENST00000447683 HSPA4P34932 840 aa19.78■□□□□ 0.76
OTUB1-204ENST00000447683 ECHDC1Q9NTX5 307 aa19.78■□□□□ 0.76
OTUB1-204ENST00000447683 ABCA3Q99758 1704 aa19.78■□□□□ 0.76
OTUB1-204ENST00000447683 CABP4P57796 275 aa19.77■□□□□ 0.76
OTUB1-204ENST00000447683 BAG4O95429 457 aaKnown RBP19.77■□□□□ 0.76
OTUB1-204ENST00000447683 ANKRD13DQ6ZTN6 518 aa19.77■□□□□ 0.76
OTUB1-204ENST00000447683 ZGPATQ8N5A5 531 aaKnown RBP19.77■□□□□ 0.76
OTUB1-204ENST00000447683 GZF1Q9H116 711 aaPredicted RBP19.77■□□□□ 0.76
OTUB1-204ENST00000447683 RAD50Q92878 1312 aa19.77■□□□□ 0.75
OTUB1-204ENST00000447683 SASH1O94885 1247 aa19.76■□□□□ 0.75
OTUB1-204ENST00000447683 TMX3Q96JJ7 454 aa19.76■□□□□ 0.75
OTUB1-204ENST00000447683 UBR2Q8IWV8 1755 aa19.76■□□□□ 0.75
OTUB1-204ENST00000447683 RRP9O43818 475 aaKnown RBP19.76■□□□□ 0.75
OTUB1-204ENST00000447683 GPATCH3Q96I76 525 aa19.76■□□□□ 0.75
OTUB1-204ENST00000447683 MYD88Q99836 296 aa19.76■□□□□ 0.75
OTUB1-204ENST00000447683 PRDM11Q9NQV5 511 aa19.76■□□□□ 0.75
OTUB1-204ENST00000447683 IFIT2P09913 472 aaKnown RBP19.75■□□□□ 0.75
OTUB1-204ENST00000447683 CUL4AQ13619 759 aa19.75■□□□□ 0.75
OTUB1-204ENST00000447683 LSG1Q9H089 658 aaKnown RBP19.75■□□□□ 0.75
OTUB1-204ENST00000447683 COL5A2P05997 1499 aaPredicted RBP19.75■□□□□ 0.75
OTUB1-204ENST00000447683 COL15A1P39059 1388 aa19.75■□□□□ 0.75
OTUB1-204ENST00000447683 GOLGA6L3A6NEY3 463 aa19.75■□□□□ 0.75
OTUB1-204ENST00000447683 G3BP1Q13283 466 aaKnown RBP eCLIP19.75■□□□□ 0.752e-7■■■□□ 14.9
OTUB1-204ENST00000447683 SLAIN2Q9P270 581 aa19.75■□□□□ 0.75
OTUB1-204ENST00000447683 PCDH11XQ9BZA7 1347 aa19.75■□□□□ 0.75
OTUB1-204ENST00000447683 PCDH11YQ9BZA8 1340 aa19.75■□□□□ 0.75
OTUB1-204ENST00000447683 GOLGA6L22H0YM25 854 aa19.74■□□□□ 0.75
OTUB1-204ENST00000447683 ZCRB1Q8TBF4 217 aaKnown RBP19.74■□□□□ 0.75
OTUB1-204ENST00000447683 SHANK3Q9BYB0 1731 aa19.73■□□□□ 0.75
OTUB1-204ENST00000447683 AACSQ86V21 672 aa19.73■□□□□ 0.75
OTUB1-204ENST00000447683 ERBB4Q15303 1308 aa19.73■□□□□ 0.75
OTUB1-204ENST00000447683 PAPPAQ13219 1627 aa19.73■□□□□ 0.75
OTUB1-204ENST00000447683 PKP1Q13835 747 aa19.73■□□□□ 0.75
OTUB1-204ENST00000447683 TOM1L2Q6ZVM7 507 aa19.73■□□□□ 0.75
OTUB1-204ENST00000447683 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.73■□□□□ 0.75
OTUB1-204ENST00000447683 NKX1-1Q15270 411 aaPredicted RBP19.72■□□□□ 0.75
OTUB1-204ENST00000447683 EPHA10Q5JZY3 1008 aa19.72■□□□□ 0.75
OTUB1-204ENST00000447683 EAF2Q96CJ1 260 aaPredicted RBP19.72■□□□□ 0.75
OTUB1-204ENST00000447683 INTS4Q96HW7 963 aaKnown RBP19.72■□□□□ 0.75
OTUB1-204ENST00000447683 ISY1Q9ULR0 285 aaKnown RBP19.72■□□□□ 0.75
OTUB1-204ENST00000447683 ERVV-2B6SEH9 535 aa19.71■□□□□ 0.75
OTUB1-204ENST00000447683 EVI5LQ96CN4 794 aa19.71■□□□□ 0.75
OTUB1-204ENST00000447683 ZDHHC9Q9Y397 364 aa19.71■□□□□ 0.75
OTUB1-204ENST00000447683 CWC27Q6UX04 472 aaKnown RBP19.71■□□□□ 0.75
OTUB1-204ENST00000447683 RUFY2Q8WXA3 655 aa19.71■□□□□ 0.75
OTUB1-204ENST00000447683 PIP4K2AP48426 406 aaPredicted RBP19.7■□□□□ 0.74
OTUB1-204ENST00000447683 PLBD2Q8NHP8 589 aa19.7■□□□□ 0.74
OTUB1-204ENST00000447683 CARD10Q9BWT7 1032 aa19.7■□□□□ 0.74
OTUB1-204ENST00000447683 ZNF335Q9H4Z2 1342 aaPredicted RBP19.7■□□□□ 0.74
OTUB1-204ENST00000447683 RABL6Q3YEC7 729 aaPredicted RBP19.7■□□□□ 0.74
OTUB1-204ENST00000447683 KIAA1211Q6ZU35 1233 aa19.7■□□□□ 0.74
OTUB1-204ENST00000447683 COPRSQ9NQ92 184 aa19.7■□□□□ 0.74
OTUB1-204ENST00000447683 DIAPH3Q9NSV4 1193 aa19.7■□□□□ 0.74
OTUB1-204ENST00000447683 SNX14Q9Y5W7 946 aa19.7■□□□□ 0.74
OTUB1-204ENST00000447683 XRCC6P12956 609 aaKnown RBP eCLIP19.69■□□□□ 0.74
OTUB1-204ENST00000447683 UPF3BQ9BZI7 483 aaKnown RBP19.69■□□□□ 0.74
OTUB1-204ENST00000447683 KCPQ6ZWJ8 1503 aa19.69■□□□□ 0.74
OTUB1-204ENST00000447683 NUP188Q5SRE5 1749 aa19.69■□□□□ 0.74
OTUB1-204ENST00000447683 RFX5P48382 616 aaPredicted RBP19.69■□□□□ 0.74
OTUB1-204ENST00000447683 NHSL1Q5SYE7 1610 aa19.69■□□□□ 0.74
OTUB1-204ENST00000447683 IL2RBP14784 551 aa19.68■□□□□ 0.74
OTUB1-204ENST00000447683 KLHL40Q2TBA0 621 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms