RNA–Protein interactions for RNA: ENST00000447271.1

PTPN3-205, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 2

Gene PTPN3, Length 587 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-205ENST00000447271 RASSF7Q02833 373 aa8.09□□□□□ -1.11
PTPN3-205ENST00000447271 CIAPIN1Q6FI81 312 aa8.09□□□□□ -1.11
PTPN3-205ENST00000447271 KCTD12Q96CX2 325 aaKnown RBP8.09□□□□□ -1.11
PTPN3-205ENST00000447271 DCAF5Q96JK2 942 aa8.09□□□□□ -1.11
PTPN3-205ENST00000447271 SLC4A5Q9BY07 1137 aa8.09□□□□□ -1.11
PTPN3-205ENST00000447271 CLTCL1P53675 1640 aa8.09□□□□□ -1.11
PTPN3-205ENST00000447271 PROX2Q3B8N5 592 aa8.08□□□□□ -1.12
PTPN3-205ENST00000447271 DEFB123Q8N688 67 aa8.08□□□□□ -1.12
PTPN3-205ENST00000447271 LAMA3Q16787 3333 aa8.08□□□□□ -1.12
PTPN3-205ENST00000447271 COL5A2P05997 1499 aaPredicted RBP8.07□□□□□ -1.12
PTPN3-205ENST00000447271 EXOC5O00471 708 aa8.07□□□□□ -1.12
PTPN3-205ENST00000447271 ZNF326Q5BKZ1 582 aaKnown RBP8.07□□□□□ -1.12
PTPN3-205ENST00000447271 CACNA1BQ00975 2339 aa8.07□□□□□ -1.12
PTPN3-205ENST00000447271 PAPPA2Q9BXP8 1791 aa8.07□□□□□ -1.12
PTPN3-205ENST00000447271 IFT172Q9UG01 1749 aa8.06□□□□□ -1.12
PTPN3-205ENST00000447271 KIAA0100Q14667 2235 aaKnown RBP8.06□□□□□ -1.12
PTPN3-205ENST00000447271 KDM6AO15550 1401 aaPredicted RBP8.06□□□□□ -1.12
PTPN3-205ENST00000447271 TNFRSF10AO00220 468 aa8.06□□□□□ -1.12
PTPN3-205ENST00000447271 LMNB1P20700 586 aa8.06□□□□□ -1.12
PTPN3-205ENST00000447271 PRIM1P49642 420 aaKnown RBP8.06□□□□□ -1.12
PTPN3-205ENST00000447271 FLAD1Q8NFF5 587 aa8.06□□□□□ -1.12
PTPN3-205ENST00000447271 CDCA7Q9BWT1 371 aaPredicted RBP8.06□□□□□ -1.12
PTPN3-205ENST00000447271 PPP1R3GB7ZBB8 358 aa8.05□□□□□ -1.12
PTPN3-205ENST00000447271 PHF14O94880 888 aa8.05□□□□□ -1.12
PTPN3-205ENST00000447271 TOM1L2Q6ZVM7 507 aa8.05□□□□□ -1.12
PTPN3-205ENST00000447271 Q7L0L9 218 aa8.05□□□□□ -1.12
PTPN3-205ENST00000447271 WAPLQ7Z5K2 1190 aa8.05□□□□□ -1.12
PTPN3-205ENST00000447271 DDX12PQ92771 950 aa8.05□□□□□ -1.12
PTPN3-205ENST00000447271 SYMPKQ92797 1274 aaKnown RBP8.05□□□□□ -1.12
PTPN3-205ENST00000447271 PIM2Q9P1W9 311 aa8.05□□□□□ -1.12
PTPN3-205ENST00000447271 ARIH1Q9Y4X5 557 aaPredicted RBP8.05□□□□□ -1.12
PTPN3-205ENST00000447271 LY75O60449 1722 aa8.05□□□□□ -1.12
PTPN3-205ENST00000447271 GPRASP1Q5JY77 1395 aa8.05□□□□□ -1.12
PTPN3-205ENST00000447271 RAB3GAP2Q9H2M9 1393 aa8.05□□□□□ -1.12
PTPN3-205ENST00000447271 PKN2Q16513 984 aaKnown RBP8.04□□□□□ -1.12
PTPN3-205ENST00000447271 EAPPQ56P03 285 aaPredicted RBP8.04□□□□□ -1.12
PTPN3-205ENST00000447271 DALRD3Q5D0E6 543 aaKnown RBP8.04□□□□□ -1.12
PTPN3-205ENST00000447271 TYW1BQ6NUM6 668 aa8.04□□□□□ -1.12
PTPN3-205ENST00000447271 CNTROBQ8N137 903 aa8.04□□□□□ -1.12
PTPN3-205ENST00000447271 HCSTQ9UBK5 93 aa8.04□□□□□ -1.12
PTPN3-205ENST00000447271 DACH1Q9UI36 760 aa8.04□□□□□ -1.12
PTPN3-205ENST00000447271 TRPM7Q96QT4 1865 aa8.03□□□□□ -1.12
PTPN3-205ENST00000447271 KCTD2Q14681 263 aa8.03□□□□□ -1.12
PTPN3-205ENST00000447271 PDIA6Q15084 440 aa8.03□□□□□ -1.12
PTPN3-205ENST00000447271 RRP7BPQ9NSQ0 103 aa8.03□□□□□ -1.12
PTPN3-205ENST00000447271 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.03□□□□□ -1.12
PTPN3-205ENST00000447271 CCNL1Q9UK58 526 aaPredicted RBP8.03□□□□□ -1.12
PTPN3-205ENST00000447271 HCN4Q9Y3Q4 1203 aa8.03□□□□□ -1.12
PTPN3-205ENST00000447271 CHD8Q9HCK8 2581 aa8.02□□□□□ -1.13
PTPN3-205ENST00000447271 TONSLQ96HA7 1378 aa8.02□□□□□ -1.13
PTPN3-205ENST00000447271 SCN4AP35499 1836 aa8.02□□□□□ -1.13
PTPN3-205ENST00000447271 KCNA3P22001 575 aa8.02□□□□□ -1.13
PTPN3-205ENST00000447271 MAP1SQ66K74 1059 aaPredicted RBP8.02□□□□□ -1.13
PTPN3-205ENST00000447271 DDX21Q9NR30 783 aaKnown RBP eCLIP8.02□□□□□ -1.13
PTPN3-205ENST00000447271 MTMR10Q9NXD2 777 aa8.02□□□□□ -1.13
PTPN3-205ENST00000447271 MUC6Q6W4X9 2439 aa8.02□□□□□ -1.13
PTPN3-205ENST00000447271 AKAP11Q9UKA4 1901 aa8.01□□□□□ -1.13
PTPN3-205ENST00000447271 NEUROD1Q13562 356 aa8.01□□□□□ -1.13
PTPN3-205ENST00000447271 TSR1Q2NL82 804 aaKnown RBP8.01□□□□□ -1.13
PTPN3-205ENST00000447271 AKAP4Q5JQC9 854 aa8.01□□□□□ -1.13
PTPN3-205ENST00000447271 C6orf132Q5T0Z8 1188 aa8.01□□□□□ -1.13
PTPN3-205ENST00000447271 NUTM2GQ5VZR2 741 aa8.01□□□□□ -1.13
PTPN3-205ENST00000447271 PLA2G2EQ9NZK7 142 aa8.01□□□□□ -1.13
PTPN3-205ENST00000447271 RBBP6Q7Z6E9 1792 aaKnown RBP8.01□□□□□ -1.13
PTPN3-205ENST00000447271 EYSQ5T1H1 3165 aa8□□□□□ -1.13
PTPN3-205ENST00000447271 C5P01031 1676 aa8□□□□□ -1.13
PTPN3-205ENST00000447271 IQCA1LA6NCM1 817 aa8□□□□□ -1.13
PTPN3-205ENST00000447271 ANP32CO43423 234 aa8□□□□□ -1.13
PTPN3-205ENST00000447271 MRE11P49959 708 aa8□□□□□ -1.13
PTPN3-205ENST00000447271 PTPN5P54829 565 aa8□□□□□ -1.13
PTPN3-205ENST00000447271 THSD4Q6ZMP0 1018 aa8□□□□□ -1.13
PTPN3-205ENST00000447271 FBXW7Q969H0 707 aa8□□□□□ -1.13
PTPN3-205ENST00000447271 TAF1DQ9H5J8 278 aaPredicted RBP8□□□□□ -1.13
PTPN3-205ENST00000447271 TLL2Q9Y6L7 1015 aa8□□□□□ -1.13
PTPN3-205ENST00000447271 MYOM3Q5VTT5 1437 aa8□□□□□ -1.13
PTPN3-205ENST00000447271 DICER1Q9UPY3 1922 aaKnown RBP7.99□□□□□ -1.13
PTPN3-205ENST00000447271 KRT37O76014 449 aa7.99□□□□□ -1.13
PTPN3-205ENST00000447271 DDNO94850 711 aaPredicted RBP7.99□□□□□ -1.13
PTPN3-205ENST00000447271 MMP10P09238 476 aa7.99□□□□□ -1.13
PTPN3-205ENST00000447271 CENPFP49454 3210 aa7.99□□□□□ -1.13
PTPN3-205ENST00000447271 FOXK2Q01167 660 aa7.99□□□□□ -1.13
PTPN3-205ENST00000447271 PRUNE2Q8WUY3 3088 aa7.99□□□□□ -1.13
PTPN3-205ENST00000447271 ADAMTSL1Q8N6G6 1762 aa7.98□□□□□ -1.13
PTPN3-205ENST00000447271 TRPA1O75762 1119 aa7.98□□□□□ -1.13
PTPN3-205ENST00000447271 EN2P19622 333 aaPredicted RBP7.98□□□□□ -1.13
PTPN3-205ENST00000447271 FMR1Q06787 632 aaKnown RBP eCLIP7.98□□□□□ -1.13
PTPN3-205ENST00000447271 NBR1Q14596 966 aa7.98□□□□□ -1.13
PTPN3-205ENST00000447271 E2F4Q16254 413 aa7.98□□□□□ -1.13
PTPN3-205ENST00000447271 MRPL50Q8N5N7 158 aaKnown RBP7.98□□□□□ -1.13
PTPN3-205ENST00000447271 EPAS1Q99814 870 aa7.98□□□□□ -1.13
PTPN3-205ENST00000447271 PRO3102Q9H379 93 aa7.98□□□□□ -1.13
PTPN3-205ENST00000447271 TSHZ2Q9NRE2 1034 aa7.98□□□□□ -1.13
PTPN3-205ENST00000447271 SAGE1Q9NXZ1 904 aa7.98□□□□□ -1.13
PTPN3-205ENST00000447271 HDAC9Q9UKV0 1011 aa7.98□□□□□ -1.13
PTPN3-205ENST00000447271 PLEKHH1Q9ULM0 1364 aa7.97□□□□□ -1.13
PTPN3-205ENST00000447271 SCN11AQ9UI33 1791 aa7.97□□□□□ -1.13
PTPN3-205ENST00000447271 ZBTB7CA1YPR0 619 aa7.97□□□□□ -1.13
PTPN3-205ENST00000447271 C3orf80F5H4A9 247 aa7.97□□□□□ -1.13
PTPN3-205ENST00000447271 WNT2BQ93097 391 aa7.97□□□□□ -1.13
PTPN3-205ENST00000447271 ZIC5Q96T25 663 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms