RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 TIMMDC1Q9NPL8 285 aa7.48□□□□□ -1.21
HMGB1P16-201ENST00000447155 AMOTL2Q9Y2J4 779 aa7.48□□□□□ -1.21
HMGB1P16-201ENST00000447155 NDUFB5O43674 189 aa7.47□□□□□ -1.21
HMGB1P16-201ENST00000447155 ATP4AP20648 1035 aa7.47□□□□□ -1.21
HMGB1P16-201ENST00000447155 AAMPQ13685 434 aa7.47□□□□□ -1.21
HMGB1P16-201ENST00000447155 FAM26DQ5JW98 314 aa7.47□□□□□ -1.21
HMGB1P16-201ENST00000447155 ASB16Q96NS5 453 aa7.47□□□□□ -1.21
HMGB1P16-201ENST00000447155 CITED4Q96RK1 184 aa7.47□□□□□ -1.21
HMGB1P16-201ENST00000447155 ATP13A2Q9NQ11 1180 aa7.47□□□□□ -1.21
HMGB1P16-201ENST00000447155 AAASQ9NRG9 546 aa7.47□□□□□ -1.21
HMGB1P16-201ENST00000447155 BRPF3Q9ULD4 1205 aa7.47□□□□□ -1.21
HMGB1P16-201ENST00000447155 TGFBR3LH3BV60 316 aa7.46□□□□□ -1.22
HMGB1P16-201ENST00000447155 ZBTB39O15060 712 aa7.46□□□□□ -1.22
HMGB1P16-201ENST00000447155 ST8SIA5O15466 376 aa7.46□□□□□ -1.22
HMGB1P16-201ENST00000447155 MSX1P28360 303 aa7.46□□□□□ -1.22
HMGB1P16-201ENST00000447155 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.46□□□□□ -1.22
HMGB1P16-201ENST00000447155 IER5Q5VY09 327 aa7.46□□□□□ -1.22
HMGB1P16-201ENST00000447155 BICDL1Q6ZP65 573 aa7.46□□□□□ -1.22
HMGB1P16-201ENST00000447155 NPM2Q86SE8 214 aaKnown RBP7.46□□□□□ -1.22
HMGB1P16-201ENST00000447155 ETFBKMTQ8IXQ9 262 aa7.46□□□□□ -1.22
HMGB1P16-201ENST00000447155 RBCK1Q9BYM8 510 aa7.46□□□□□ -1.22
HMGB1P16-201ENST00000447155 ANKIB1Q9P2G1 1089 aa7.46□□□□□ -1.22
HMGB1P16-201ENST00000447155 DNMT3LQ9UJW3 386 aa7.46□□□□□ -1.22
HMGB1P16-201ENST00000447155 ANKRD33BA6NCL7 494 aa7.45□□□□□ -1.22
HMGB1P16-201ENST00000447155 FZD6O60353 706 aa7.45□□□□□ -1.22
HMGB1P16-201ENST00000447155 MAN1A2O60476 641 aa7.45□□□□□ -1.22
HMGB1P16-201ENST00000447155 TREML1Q86YW5 311 aa7.45□□□□□ -1.22
HMGB1P16-201ENST00000447155 RGL4Q8IZJ4 473 aa7.45□□□□□ -1.22
HMGB1P16-201ENST00000447155 SUSD3Q96L08 255 aa7.45□□□□□ -1.22
HMGB1P16-201ENST00000447155 NEUROD4Q9HD90 331 aa7.45□□□□□ -1.22
HMGB1P16-201ENST00000447155 BCS1LQ9Y276 419 aa7.45□□□□□ -1.22
HMGB1P16-201ENST00000447155 DYRK1BQ9Y463 629 aa7.45□□□□□ -1.22
HMGB1P16-201ENST00000447155 ZAP70P43403 619 aa7.44□□□□□ -1.22
HMGB1P16-201ENST00000447155 ARSJQ5FYB0 599 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P16-201ENST00000447155 NPAS4Q8IUM7 802 aa7.44□□□□□ -1.22
HMGB1P16-201ENST00000447155 ZIC5Q96T25 663 aa7.44□□□□□ -1.22
HMGB1P16-201ENST00000447155 CCDC87Q9NVE4 849 aa7.44□□□□□ -1.22
HMGB1P16-201ENST00000447155 MICAL2O94851 1124 aa7.43□□□□□ -1.22
HMGB1P16-201ENST00000447155 F11P03951 625 aa7.43□□□□□ -1.22
HMGB1P16-201ENST00000447155 MZF1P28698 734 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P16-201ENST00000447155 ATCAYQ86WG3 371 aa7.43□□□□□ -1.22
HMGB1P16-201ENST00000447155 CRISPLD1Q9H336 500 aa7.43□□□□□ -1.22
HMGB1P16-201ENST00000447155 FAM13BQ9NYF5 915 aa7.43□□□□□ -1.22
HMGB1P16-201ENST00000447155 A0A1W2PNR3 127 aa7.42□□□□□ -1.22
HMGB1P16-201ENST00000447155 USP5P45974 858 aa7.42□□□□□ -1.22
HMGB1P16-201ENST00000447155 PDE3BQ13370 1112 aa7.42□□□□□ -1.22
HMGB1P16-201ENST00000447155 COL19A1Q14993 1142 aa7.42□□□□□ -1.22
HMGB1P16-201ENST00000447155 ZNF280CQ8ND82 737 aa7.42□□□□□ -1.22
HMGB1P16-201ENST00000447155 EDEM1Q92611 657 aa7.42□□□□□ -1.22
HMGB1P16-201ENST00000447155 KIFC2Q96AC6 838 aa7.42□□□□□ -1.22
HMGB1P16-201ENST00000447155 KLRG1Q96E93 195 aa7.42□□□□□ -1.22
HMGB1P16-201ENST00000447155 HSH2DQ96JZ2 352 aa7.42□□□□□ -1.22
HMGB1P16-201ENST00000447155 IRX2Q9BZI1 471 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P16-201ENST00000447155 SENP2Q9HC62 589 aa7.42□□□□□ -1.22
HMGB1P16-201ENST00000447155 GPAMQ9HCL2 828 aa7.42□□□□□ -1.22
HMGB1P16-201ENST00000447155 DMGDHQ9UI17 866 aaKnown RBP7.42□□□□□ -1.22
HMGB1P16-201ENST00000447155 RBM47A0AV96 593 aaKnown RBP7.41□□□□□ -1.22
HMGB1P16-201ENST00000447155 PCSK2P16519 638 aa7.41□□□□□ -1.22
HMGB1P16-201ENST00000447155 DNM1Q05193 864 aaKnown RBP7.41□□□□□ -1.22
HMGB1P16-201ENST00000447155 TMC7Q7Z402 723 aa7.41□□□□□ -1.22
HMGB1P16-201ENST00000447155 PGBD3Q8N328 593 aa7.41□□□□□ -1.22
HMGB1P16-201ENST00000447155 DMRTB1Q96MA1 342 aa7.41□□□□□ -1.22
HMGB1P16-201ENST00000447155 DACH1Q9UI36 760 aa7.41□□□□□ -1.22
HMGB1P16-201ENST00000447155 POLIQ9UNA4 740 aa7.41□□□□□ -1.22
HMGB1P16-201ENST00000447155 GJA3Q9Y6H8 435 aa7.41□□□□□ -1.22
HMGB1P16-201ENST00000447155 SENP3-EIF4A1A0A087X0R7 540 aa7.4□□□□□ -1.22
HMGB1P16-201ENST00000447155 PDGFAP04085 211 aa7.4□□□□□ -1.22
HMGB1P16-201ENST00000447155 RPLP1P05386 114 aaKnown RBP7.4□□□□□ -1.22
HMGB1P16-201ENST00000447155 IDH3AP50213 366 aa7.4□□□□□ -1.22
HMGB1P16-201ENST00000447155 LRRC69Q6ZNQ3 347 aa7.4□□□□□ -1.22
HMGB1P16-201ENST00000447155 BTLAQ7Z6A9 289 aa7.4□□□□□ -1.22
HMGB1P16-201ENST00000447155 NLRP8Q86W28 1048 aa7.4□□□□□ -1.22
HMGB1P16-201ENST00000447155 GJD3Q8N144 294 aa7.4□□□□□ -1.22
HMGB1P16-201ENST00000447155 TMC1Q8TDI8 760 aa7.4□□□□□ -1.22
HMGB1P16-201ENST00000447155 PIK3R5Q8WYR1 880 aa7.4□□□□□ -1.22
HMGB1P16-201ENST00000447155 FAM129BQ96TA1 746 aa7.4□□□□□ -1.22
HMGB1P16-201ENST00000447155 GAS2L1Q99501 681 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P16-201ENST00000447155 BCL2L13Q9BXK5 485 aa7.4□□□□□ -1.22
HMGB1P16-201ENST00000447155 RUBCNLQ9H714 662 aa7.4□□□□□ -1.22
HMGB1P16-201ENST00000447155 OPLAHO14841 1288 aa7.39□□□□□ -1.23
HMGB1P16-201ENST00000447155 TREHO43280 583 aa7.39□□□□□ -1.23
HMGB1P16-201ENST00000447155 RBM25P49756 843 aaKnown RBP7.39□□□□□ -1.23
HMGB1P16-201ENST00000447155 ARSDP51689 593 aa7.39□□□□□ -1.23
HMGB1P16-201ENST00000447155 PTSQ03393 145 aa7.39□□□□□ -1.23
HMGB1P16-201ENST00000447155 LBRQ14739 615 aaKnown RBP7.39□□□□□ -1.23
HMGB1P16-201ENST00000447155 EFHC2Q5JST6 749 aa7.39□□□□□ -1.23
HMGB1P16-201ENST00000447155 SAMD5Q5TGI4 173 aa7.39□□□□□ -1.23
HMGB1P16-201ENST00000447155 GPR152Q8TDT2 470 aa7.39□□□□□ -1.23
HMGB1P16-201ENST00000447155 SOBPA7XYQ1 873 aa7.38□□□□□ -1.23
HMGB1P16-201ENST00000447155 INPP5BP32019 993 aa7.38□□□□□ -1.23
HMGB1P16-201ENST00000447155 EHHADHQ08426 723 aa7.38□□□□□ -1.23
HMGB1P16-201ENST00000447155 ALKBH8Q96BT7 664 aaKnown RBP7.38□□□□□ -1.23
HMGB1P16-201ENST00000447155 NUDT16Q96DE0 195 aaKnown RBP7.38□□□□□ -1.23
HMGB1P16-201ENST00000447155 SLC35F4A4IF30 521 aa7.37□□□□□ -1.23
HMGB1P16-201ENST00000447155 IGHA2P01877 340 aa7.37□□□□□ -1.23
HMGB1P16-201ENST00000447155 EPB42P16452 691 aa7.37□□□□□ -1.23
HMGB1P16-201ENST00000447155 RANGAP1P46060 587 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P16-201ENST00000447155 TYRO3Q06418 890 aa7.37□□□□□ -1.23
HMGB1P16-201ENST00000447155 DSC3Q14574 896 aa7.37□□□□□ -1.23
HMGB1P16-201ENST00000447155 EAPPQ56P03 285 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms