RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 ADAMTS13Q76LX8 1427 aa13.45□□□□□ -0.26
PTCH2-203ENST00000447098 ARHGEF10O15013 1369 aa13.45□□□□□ -0.26
PTCH2-203ENST00000447098 ZNF500O60304 480 aaPredicted RBP13.45□□□□□ -0.26
PTCH2-203ENST00000447098 ZPR1O75312 459 aa13.45□□□□□ -0.26
PTCH2-203ENST00000447098 DDIT3P35638 169 aa13.45□□□□□ -0.26
PTCH2-203ENST00000447098 PKP1Q13835 747 aa13.45□□□□□ -0.26
PTCH2-203ENST00000447098 UPF3BQ9BZI7 483 aaKnown RBP13.45□□□□□ -0.26
PTCH2-203ENST00000447098 AGLP35573 1532 aa13.45□□□□□ -0.26
PTCH2-203ENST00000447098 LRRFIP1Q32MZ4 808 aaKnown RBP13.45□□□□□ -0.26
PTCH2-203ENST00000447098 PRAMEF22A3QJZ6 481 aa13.44□□□□□ -0.26
PTCH2-203ENST00000447098 RNF20Q5VTR2 975 aa13.44□□□□□ -0.26
PTCH2-203ENST00000447098 LMBR1LQ6UX01 489 aa13.44□□□□□ -0.26
PTCH2-203ENST00000447098 CWC25Q9NXE8 425 aaPredicted RBP13.44□□□□□ -0.26
PTCH2-203ENST00000447098 USP16Q9Y5T5 823 aa13.44□□□□□ -0.26
PTCH2-203ENST00000447098 QRICH2Q9H0J4 1663 aa13.44□□□□□ -0.26
PTCH2-203ENST00000447098 PTPRMP28827 1452 aa13.44□□□□□ -0.26
PTCH2-203ENST00000447098 VPS37CA5D8V6 355 aaPredicted RBP13.44□□□□□ -0.26
PTCH2-203ENST00000447098 GRM8O00222 908 aa13.44□□□□□ -0.26
PTCH2-203ENST00000447098 CHMP4CQ96CF2 233 aa13.44□□□□□ -0.26
PTCH2-203ENST00000447098 PCDH11XQ9BZA7 1347 aa13.44□□□□□ -0.26
PTCH2-203ENST00000447098 PCDH11YQ9BZA8 1340 aa13.44□□□□□ -0.26
PTCH2-203ENST00000447098 ZBTB7BO15156 539 aaPredicted RBP13.44□□□□□ -0.26
PTCH2-203ENST00000447098 IDH1O75874 414 aaKnown RBP13.44□□□□□ -0.26
PTCH2-203ENST00000447098 IFIT5Q13325 482 aaKnown RBP13.44□□□□□ -0.26
PTCH2-203ENST00000447098 ANKRD44Q8N8A2 993 aa13.44□□□□□ -0.26
PTCH2-203ENST00000447098 AATKQ6ZMQ8 1374 aa13.44□□□□□ -0.26
PTCH2-203ENST00000447098 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.44□□□□□ -0.26
PTCH2-203ENST00000447098 CBX1P83916 185 aa13.44□□□□□ -0.26
PTCH2-203ENST00000447098 FAM184AQ8NB25 1140 aa13.44□□□□□ -0.26
PTCH2-203ENST00000447098 KLHDC4Q8TBB5 520 aa13.44□□□□□ -0.26
PTCH2-203ENST00000447098 SLC52A2Q9HAB3 445 aa13.44□□□□□ -0.26
PTCH2-203ENST00000447098 IGSF1Q8N6C5 1336 aa13.43□□□□□ -0.26
PTCH2-203ENST00000447098 TTC22Q5TAA0 569 aa13.43□□□□□ -0.26
PTCH2-203ENST00000447098 ABCF2Q9UG63 623 aa13.43□□□□□ -0.26
PTCH2-203ENST00000447098 DNAJC10Q8IXB1 793 aa13.43□□□□□ -0.26
PTCH2-203ENST00000447098 DRC7Q8IY82 874 aa13.43□□□□□ -0.26
PTCH2-203ENST00000447098 KIF2CQ99661 725 aa13.43□□□□□ -0.26
PTCH2-203ENST00000447098 IBTKQ9P2D0 1353 aaPredicted RBP13.43□□□□□ -0.26
PTCH2-203ENST00000447098 EIF4A1P60842 406 aaKnown RBP13.43□□□□□ -0.26
PTCH2-203ENST00000447098 RRP12Q5JTH9 1297 aaKnown RBP13.43□□□□□ -0.26
PTCH2-203ENST00000447098 CEP85Q6P2H3 762 aa13.43□□□□□ -0.26
PTCH2-203ENST00000447098 TRDNQ13061 729 aa13.42□□□□□ -0.26
PTCH2-203ENST00000447098 OTUD7AQ8TE49 926 aaPredicted RBP13.42□□□□□ -0.26
PTCH2-203ENST00000447098 ZNF219Q9P2Y4 722 aaPredicted RBP13.42□□□□□ -0.26
PTCH2-203ENST00000447098 ERBB3P21860 1342 aa13.42□□□□□ -0.26
PTCH2-203ENST00000447098 H3BQV1 296 aa13.42□□□□□ -0.26
PTCH2-203ENST00000447098 SF3B2Q13435 895 aaKnown RBP13.42□□□□□ -0.26
PTCH2-203ENST00000447098 IFFO2Q5TF58 517 aa13.42□□□□□ -0.26
PTCH2-203ENST00000447098 DDX21Q9NR30 783 aaKnown RBP eCLIP13.42□□□□□ -0.26
PTCH2-203ENST00000447098 NCOA3Q9Y6Q9 1424 aa13.42□□□□□ -0.26
PTCH2-203ENST00000447098 LDHAL6AQ6ZMR3 332 aa13.42□□□□□ -0.26
PTCH2-203ENST00000447098 RHPN1Q8TCX5 695 aa13.42□□□□□ -0.26
PTCH2-203ENST00000447098 NBPF7P0C2Y1 421 aaPredicted RBP13.42□□□□□ -0.26
PTCH2-203ENST00000447098 PHKG2P15735 406 aa13.42□□□□□ -0.26
PTCH2-203ENST00000447098 PLEKHM2Q8IWE5 1019 aa13.42□□□□□ -0.26
PTCH2-203ENST00000447098 SMAP1Q8IYB5 467 aaPredicted RBP13.42□□□□□ -0.26
PTCH2-203ENST00000447098 LINS1Q8NG48 757 aa13.42□□□□□ -0.26
PTCH2-203ENST00000447098 ZNF830Q96NB3 372 aaPredicted RBP13.42□□□□□ -0.26
PTCH2-203ENST00000447098 LARP6Q9BRS8 491 aaKnown RBP13.42□□□□□ -0.26
PTCH2-203ENST00000447098 USP26Q9BXU7 913 aa13.42□□□□□ -0.26
PTCH2-203ENST00000447098 WWC3Q9ULE0 1092 aa13.42□□□□□ -0.26
PTCH2-203ENST00000447098 RALYLQ86SE5 291 aaKnown RBP13.41□□□□□ -0.26
PTCH2-203ENST00000447098 CHAMP1Q96JM3 812 aa13.41□□□□□ -0.26
PTCH2-203ENST00000447098 GDPD2Q9HCC8 539 aa13.41□□□□□ -0.26
PTCH2-203ENST00000447098 TMEM63CQ9P1W3 806 aa13.41□□□□□ -0.26
PTCH2-203ENST00000447098 USP25Q9UHP3 1055 aa13.41□□□□□ -0.26
PTCH2-203ENST00000447098 STK3Q13188 491 aa13.41□□□□□ -0.26
PTCH2-203ENST00000447098 KIF3AQ9Y496 699 aa13.41□□□□□ -0.26
PTCH2-203ENST00000447098 PREX1Q8TCU6 1659 aa13.41□□□□□ -0.26
PTCH2-203ENST00000447098 PTPRUQ92729 1446 aa13.4□□□□□ -0.26
PTCH2-203ENST00000447098 GOLGA6L6A8MZA4 724 aa13.4□□□□□ -0.26
PTCH2-203ENST00000447098 IGHMBP2P38935 993 aaKnown RBP13.4□□□□□ -0.26
PTCH2-203ENST00000447098 MCM2P49736 904 aa13.4□□□□□ -0.26
PTCH2-203ENST00000447098 NCBP3Q53F19 620 aaKnown RBP13.4□□□□□ -0.26
PTCH2-203ENST00000447098 NFXL1Q6ZNB6 911 aa13.4□□□□□ -0.26
PTCH2-203ENST00000447098 NOL10Q9BSC4 688 aaKnown RBP13.4□□□□□ -0.26
PTCH2-203ENST00000447098 CPLX1O14810 134 aa13.4□□□□□ -0.26
PTCH2-203ENST00000447098 GLRX3O76003 335 aaKnown RBP13.4□□□□□ -0.26
PTCH2-203ENST00000447098 SDSP20132 328 aa13.4□□□□□ -0.26
PTCH2-203ENST00000447098 KCNQ4P56696 695 aa13.4□□□□□ -0.26
PTCH2-203ENST00000447098 GPT2Q8TD30 523 aa13.4□□□□□ -0.26
PTCH2-203ENST00000447098 FAM89AQ96GI7 184 aa13.4□□□□□ -0.26
PTCH2-203ENST00000447098 IQSEC3Q9UPP2 1182 aaPredicted RBP13.4□□□□□ -0.26
PTCH2-203ENST00000447098 ZNF652Q9Y2D9 606 aa13.4□□□□□ -0.26
PTCH2-203ENST00000447098 PROSER3Q2NL68 480 aa13.4□□□□□ -0.26
PTCH2-203ENST00000447098 CCDC24Q8N4L8 307 aa13.4□□□□□ -0.26
PTCH2-203ENST00000447098 TEX13AQ9BXU3 409 aaPredicted RBP13.4□□□□□ -0.26
PTCH2-203ENST00000447098 ADGRL3Q9HAR2 1447 aa13.4□□□□□ -0.26
PTCH2-203ENST00000447098 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
PTCH2-203ENST00000447098 CCDC94Q9BW85 323 aaPredicted RBP13.39□□□□□ -0.27
PTCH2-203ENST00000447098 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.39□□□□□ -0.27
PTCH2-203ENST00000447098 DZIP3Q86Y13 1208 aaKnown RBP13.39□□□□□ -0.27
PTCH2-203ENST00000447098 AK7Q96M32 723 aa13.39□□□□□ -0.27
PTCH2-203ENST00000447098 GSPT1P15170 499 aaKnown RBP13.39□□□□□ -0.27
PTCH2-203ENST00000447098 HELBQ8NG08 1087 aaPredicted RBP13.39□□□□□ -0.27
PTCH2-203ENST00000447098 SMC3Q9UQE7 1217 aa13.39□□□□□ -0.27
PTCH2-203ENST00000447098 MROH2AA6NES4 1674 aa13.39□□□□□ -0.27
PTCH2-203ENST00000447098 RAB11FIP3O75154 756 aa13.39□□□□□ -0.27
PTCH2-203ENST00000447098 MROH1Q8NDA8 1641 aa13.39□□□□□ -0.27
PTCH2-203ENST00000447098 PNMA6EA0A0J9YXQ4 647 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms