RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 CKAP2LQ8IYA6 745 aa17.03■□□□□ 0.32
ERCC3-203ENST00000445889 DNAAF4Q8WXU2 420 aa17.03■□□□□ 0.32
ERCC3-203ENST00000445889 SIL1Q9H173 461 aa17.03■□□□□ 0.32
ERCC3-203ENST00000445889 PYCARDQ9ULZ3 195 aa17.03■□□□□ 0.32
ERCC3-203ENST00000445889 MTMR6Q9Y217 621 aa17.03■□□□□ 0.32
ERCC3-203ENST00000445889 TMEM2Q9UHN6 1383 aa17.03■□□□□ 0.32
ERCC3-203ENST00000445889 MON2Q7Z3U7 1717 aa17.03■□□□□ 0.32
ERCC3-203ENST00000445889 PROSER3Q2NL68 480 aa17.03■□□□□ 0.32
ERCC3-203ENST00000445889 BEND3Q5T5X7 828 aa17.03■□□□□ 0.32
ERCC3-203ENST00000445889 KDRP35968 1356 aa17.03■□□□□ 0.32
ERCC3-203ENST00000445889 RAB11FIP3O75154 756 aa17.03■□□□□ 0.32
ERCC3-203ENST00000445889 AIMP1Q12904 312 aaKnown RBP17.03■□□□□ 0.32
ERCC3-203ENST00000445889 KLHDC4Q8TBB5 520 aa17.03■□□□□ 0.32
ERCC3-203ENST00000445889 PIBF1Q8WXW3 757 aa17.03■□□□□ 0.32
ERCC3-203ENST00000445889 FAM184AQ8NB25 1140 aa17.02■□□□□ 0.32
ERCC3-203ENST00000445889 C9orf78Q9NZ63 289 aaPredicted RBP17.02■□□□□ 0.32
ERCC3-203ENST00000445889 LRRC59Q96AG4 307 aaKnown RBP17.02■□□□□ 0.31
ERCC3-203ENST00000445889 TPCN1Q9ULQ1 816 aa17.02■□□□□ 0.31
ERCC3-203ENST00000445889 PPP6R1Q9UPN7 881 aa17.02■□□□□ 0.31
ERCC3-203ENST00000445889 AACSQ86V21 672 aa17.01■□□□□ 0.31
ERCC3-203ENST00000445889 MYRIPQ8NFW9 859 aa17.01■□□□□ 0.31
ERCC3-203ENST00000445889 NDUFB9Q9Y6M9 179 aa17.01■□□□□ 0.31
ERCC3-203ENST00000445889 PPFIA3O75145 1194 aa17.01■□□□□ 0.31
ERCC3-203ENST00000445889 CDC37L1Q7L3B6 337 aa17.01■□□□□ 0.31
ERCC3-203ENST00000445889 CLASRPQ8N2M8 674 aaKnown RBP17.01■□□□□ 0.31
ERCC3-203ENST00000445889 EDC3Q96F86 508 aaKnown RBP17.01■□□□□ 0.31
ERCC3-203ENST00000445889 TNRQ92752 1358 aa17.01■□□□□ 0.31
ERCC3-203ENST00000445889 MAP3K5Q99683 1374 aa17.01■□□□□ 0.31
ERCC3-203ENST00000445889 SSH2Q76I76 1423 aa17.01■□□□□ 0.31
ERCC3-203ENST00000445889 ADAMTS13Q76LX8 1427 aa17.01■□□□□ 0.31
ERCC3-203ENST00000445889 CHGBP05060 677 aa17■□□□□ 0.31
ERCC3-203ENST00000445889 IFIT2P09913 472 aaKnown RBP17■□□□□ 0.31
ERCC3-203ENST00000445889 LIG1P18858 919 aa17■□□□□ 0.31
ERCC3-203ENST00000445889 EIF4A1P60842 406 aaKnown RBP17■□□□□ 0.31
ERCC3-203ENST00000445889 NBPF6Q5VWK0 638 aa17■□□□□ 0.31
ERCC3-203ENST00000445889 LARP1BQ659C4 914 aaKnown RBP17■□□□□ 0.31
ERCC3-203ENST00000445889 ZNF710Q8N1W2 664 aa17■□□□□ 0.31
ERCC3-203ENST00000445889 NBPF4Q96M43 638 aa17■□□□□ 0.31
ERCC3-203ENST00000445889 BOLA2Q9H3K6 86 aa17■□□□□ 0.31
ERCC3-203ENST00000445889 SPATA31D1Q6ZQQ2 1576 aa17■□□□□ 0.31
ERCC3-203ENST00000445889 PTPRUQ92729 1446 aa17■□□□□ 0.31
ERCC3-203ENST00000445889 LUZP1Q86V48 1076 aa17■□□□□ 0.31
ERCC3-203ENST00000445889 KCNF1Q9H3M0 494 aa17■□□□□ 0.31
ERCC3-203ENST00000445889 TLR7Q9NYK1 1049 aaKnown RBP17■□□□□ 0.31
ERCC3-203ENST00000445889 CCDC9Q9Y3X0 531 aaKnown RBP17■□□□□ 0.31
ERCC3-203ENST00000445889 CYP46A1Q9Y6A2 500 aa17■□□□□ 0.31
ERCC3-203ENST00000445889 UVSSAQ2YD98 709 aa17■□□□□ 0.31
ERCC3-203ENST00000445889 MAP3K2Q9Y2U5 619 aa17■□□□□ 0.31
ERCC3-203ENST00000445889 SIPA1L2Q9P2F8 1722 aaPredicted RBP17■□□□□ 0.31
ERCC3-203ENST00000445889 TECPR2O15040 1411 aa16.99■□□□□ 0.31
ERCC3-203ENST00000445889 CBX1P83916 185 aa16.99■□□□□ 0.31
ERCC3-203ENST00000445889 TTC6Q86TZ1 520 aa16.99■□□□□ 0.31
ERCC3-203ENST00000445889 TMEM87AQ8NBN3 555 aa16.99■□□□□ 0.31
ERCC3-203ENST00000445889 NRKQ7Z2Y5 1582 aa16.99■□□□□ 0.31
ERCC3-203ENST00000445889 GLRX3O76003 335 aaKnown RBP16.99■□□□□ 0.31
ERCC3-203ENST00000445889 FOSBP53539 338 aa16.99■□□□□ 0.31
ERCC3-203ENST00000445889 RBM8AQ9Y5S9 174 aaKnown RBP16.99■□□□□ 0.31
ERCC3-203ENST00000445889 ITSN1Q15811 1721 aa16.98■□□□□ 0.31
ERCC3-203ENST00000445889 BTBD11A6QL63 1104 aa16.98■□□□□ 0.31
ERCC3-203ENST00000445889 DDX11Q96FC9 970 aa16.98■□□□□ 0.31
ERCC3-203ENST00000445889 FUCA2Q9BTY2 467 aa16.98■□□□□ 0.31
ERCC3-203ENST00000445889 PRDM4Q9UKN5 801 aa16.98■□□□□ 0.31
ERCC3-203ENST00000445889 TTC21AQ8NDW8 1320 aa16.98■□□□□ 0.31
ERCC3-203ENST00000445889 HTATSF1O43719 755 aaKnown RBP16.97■□□□□ 0.31
ERCC3-203ENST00000445889 TEFQ10587 303 aa16.97■□□□□ 0.31
ERCC3-203ENST00000445889 NMIQ13287 307 aaPredicted RBP16.97■□□□□ 0.31
ERCC3-203ENST00000445889 ECHDC1Q9NTX5 307 aa16.97■□□□□ 0.31
ERCC3-203ENST00000445889 AOX1Q06278 1338 aa16.97■□□□□ 0.31
ERCC3-203ENST00000445889 MTERF4Q7Z6M4 381 aaKnown RBP16.97■□□□□ 0.31
ERCC3-203ENST00000445889 SPDYE4A6NLX3 237 aa16.97■□□□□ 0.31
ERCC3-203ENST00000445889 PTGS1P23219 599 aa16.97■□□□□ 0.31
ERCC3-203ENST00000445889 CEBPZQ03701 1054 aaKnown RBP16.97■□□□□ 0.31
ERCC3-203ENST00000445889 CREB3L3Q68CJ9 461 aa16.97■□□□□ 0.31
ERCC3-203ENST00000445889 NRBP1Q9UHY1 535 aa16.97■□□□□ 0.31
ERCC3-203ENST00000445889 ATP6V1DQ9Y5K8 247 aa16.97■□□□□ 0.31
ERCC3-203ENST00000445889 AKAP12Q02952 1782 aa16.96■□□□□ 0.31
ERCC3-203ENST00000445889 LRMPQ12912 555 aa16.96■□□□□ 0.31
ERCC3-203ENST00000445889 EAF2Q96CJ1 260 aaPredicted RBP16.96■□□□□ 0.31
ERCC3-203ENST00000445889 IL17RAQ96F46 866 aa16.96■□□□□ 0.31
ERCC3-203ENST00000445889 ZHX1Q9UKY1 873 aaPredicted RBP16.96■□□□□ 0.31
ERCC3-203ENST00000445889 ZSWIM6Q9HCJ5 1215 aa16.96■□□□□ 0.3
ERCC3-203ENST00000445889 A0A0D9SFI3 127 aa16.95■□□□□ 0.3
ERCC3-203ENST00000445889 LETM1O95202 739 aaPredicted RBP16.95■□□□□ 0.3
ERCC3-203ENST00000445889 NECTIN1Q15223 517 aa16.95■□□□□ 0.3
ERCC3-203ENST00000445889 DACT1Q9NYF0 836 aa16.95■□□□□ 0.3
ERCC3-203ENST00000445889 EID1Q9Y6B2 187 aa16.95■□□□□ 0.3
ERCC3-203ENST00000445889 SETD1BQ9UPS6 1966 aaKnown RBP16.95■□□□□ 0.3
ERCC3-203ENST00000445889 A0A087WWV3 80 aa16.95■□□□□ 0.3
ERCC3-203ENST00000445889 ZKSCAN1P17029 563 aaPredicted RBP16.95■□□□□ 0.3
ERCC3-203ENST00000445889 PIP4K2AP48426 406 aaPredicted RBP16.95■□□□□ 0.3
ERCC3-203ENST00000445889 VPS53Q5VIR6 699 aa16.95■□□□□ 0.3
ERCC3-203ENST00000445889 DRC7Q8IY82 874 aa16.95■□□□□ 0.3
ERCC3-203ENST00000445889 CCDC94Q9BW85 323 aaPredicted RBP16.95■□□□□ 0.3
ERCC3-203ENST00000445889 KIF3AQ9Y496 699 aa16.95■□□□□ 0.3
ERCC3-203ENST00000445889 ADCY9O60503 1353 aa16.94■□□□□ 0.3
ERCC3-203ENST00000445889 LMOD2Q6P5Q4 547 aa16.94■□□□□ 0.3
ERCC3-203ENST00000445889 ZNF530Q6P9A1 599 aaPredicted RBP16.94■□□□□ 0.3
ERCC3-203ENST00000445889 LARP1Q6PKG0 1096 aaKnown RBP16.94■□□□□ 0.3
ERCC3-203ENST00000445889 RUFY2Q8WXA3 655 aa16.94■□□□□ 0.3
ERCC3-203ENST00000445889 PRIMPOLQ96LW4 560 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 164.3 ms