RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, humanhuman

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-215ENST00000445561 MBD3O95983 291 aa15.22■□□□□ 0.03
TRO-215ENST00000445561 PTH1RQ03431 593 aa15.22■□□□□ 0.03
TRO-215ENST00000445561 RUFY3Q7L099 469 aa15.22■□□□□ 0.03
TRO-215ENST00000445561 RNF214Q8ND24 703 aa15.22■□□□□ 0.03
TRO-215ENST00000445561 TTC41PQ6P2S7 1318 aa15.21■□□□□ 0.03
TRO-215ENST00000445561 USP42Q9H9J4 1324 aaKnown RBP15.21■□□□□ 0.03
TRO-215ENST00000445561 RPAP1Q9BWH6 1393 aaPredicted RBP15.21■□□□□ 0.03
TRO-215ENST00000445561 IFIT2P09913 472 aaKnown RBP15.21■□□□□ 0.03
TRO-215ENST00000445561 CASTP20810 708 aaKnown RBP15.21■□□□□ 0.03
TRO-215ENST00000445561 SUCLG2Q96I99 432 aa15.21■□□□□ 0.03
TRO-215ENST00000445561 ALDH1L1O75891 902 aa15.21■□□□□ 0.02
TRO-215ENST00000445561 SLC39A6Q13433 755 aa15.21■□□□□ 0.02
TRO-215ENST00000445561 AACSQ86V21 672 aa15.21■□□□□ 0.02
TRO-215ENST00000445561 ECHDC1Q9NTX5 307 aa15.21■□□□□ 0.02
TRO-215ENST00000445561 WDR33Q9C0J8 1336 aaKnown RBP15.2■□□□□ 0.02
TRO-215ENST00000445561 USP48Q86UV5 1035 aa15.2■□□□□ 0.02
TRO-215ENST00000445561 ZSCAN30Q86W11 494 aa15.2■□□□□ 0.02
TRO-215ENST00000445561 DDX54Q8TDD1 881 aaKnown RBP15.2■□□□□ 0.02
TRO-215ENST00000445561 KAZALD1Q96I82 304 aa15.2■□□□□ 0.02
TRO-215ENST00000445561 BICC1Q9H694 974 aaKnown RBP15.2■□□□□ 0.02
TRO-215ENST00000445561 LARGE1O95461 756 aa15.2■□□□□ 0.02
TRO-215ENST00000445561 ZC3H6P61129 1189 aaKnown RBP15.2■□□□□ 0.02
TRO-215ENST00000445561 ADCK5Q3MIX3 580 aa15.2■□□□□ 0.02
TRO-215ENST00000445561 HEG1Q9ULI3 1381 aa15.19■□□□□ 0.02
TRO-215ENST00000445561 GRM8O00222 908 aa15.19■□□□□ 0.02
TRO-215ENST00000445561 PRPF40BQ6NWY9 871 aaKnown RBP15.19■□□□□ 0.02
TRO-215ENST00000445561 SIL1Q9H173 461 aa15.19■□□□□ 0.02
TRO-215ENST00000445561 CCDC8Q9H0W5 538 aaPredicted RBP15.19■□□□□ 0.02
TRO-215ENST00000445561 HYPKQ9NX55 129 aa15.19■□□□□ 0.02
TRO-215ENST00000445561 LIMCH1Q9UPQ0 1083 aa15.19■□□□□ 0.02
TRO-215ENST00000445561 NCAPD2Q15021 1401 aa15.18■□□□□ 0.02
TRO-215ENST00000445561 MYL6BP14649 208 aa15.18■□□□□ 0.02
TRO-215ENST00000445561 LINS1Q8NG48 757 aa15.18■□□□□ 0.02
TRO-215ENST00000445561 KLHDC4Q8TBB5 520 aa15.18■□□□□ 0.02
TRO-215ENST00000445561 TLR7Q9NYK1 1049 aaKnown RBP15.18■□□□□ 0.02
TRO-215ENST00000445561 SASH1O94885 1247 aa15.18■□□□□ 0.02
TRO-215ENST00000445561 PDIA6Q15084 440 aa15.18■□□□□ 0.02
TRO-215ENST00000445561 GPATCH3Q96I76 525 aa15.18■□□□□ 0.02
TRO-215ENST00000445561 PDLIM2Q96JY6 352 aa15.18■□□□□ 0.02
TRO-215ENST00000445561 JAKMIP1Q96N16 626 aaKnown RBP15.18■□□□□ 0.02
TRO-215ENST00000445561 MSNP26038 577 aaKnown RBP15.17■□□□□ 0.02
TRO-215ENST00000445561 KRT28Q7Z3Y7 464 aa15.17■□□□□ 0.02
TRO-215ENST00000445561 EAF2Q96CJ1 260 aaPredicted RBP15.17■□□□□ 0.02
TRO-215ENST00000445561 FAM227BQ96M60 508 aa15.17■□□□□ 0.02
TRO-215ENST00000445561 CNPY2Q9Y2B0 182 aa15.17■□□□□ 0.02
TRO-215ENST00000445561 PHRF1Q9P1Y6 1649 aaKnown RBP15.17■□□□□ 0.02
TRO-215ENST00000445561 SYT1P21579 422 aa15.17■□□□□ 0.02
TRO-215ENST00000445561 ERC1Q8IUD2 1116 aa15.17■□□□□ 0.02
TRO-215ENST00000445561 RUFY2Q8WXA3 655 aa15.17■□□□□ 0.02
TRO-215ENST00000445561 DDX21Q9NR30 783 aaKnown RBP eCLIP15.17■□□□□ 0.02
TRO-215ENST00000445561 IGKV5-2P06315 115 aa15.16■□□□□ 0.02
TRO-215ENST00000445561 RIC3Q7Z5B4 369 aa15.16■□□□□ 0.02
TRO-215ENST00000445561 CCDC83Q8IWF9 413 aa15.16■□□□□ 0.02
TRO-215ENST00000445561 SLIT3O75094 1523 aa15.16■□□□□ 0.02
TRO-215ENST00000445561 CRYBG1Q9Y4K1 1723 aa15.16■□□□□ 0.02
TRO-215ENST00000445561 STX6O43752 255 aa15.16■□□□□ 0.02
TRO-215ENST00000445561 ZSCAN22P10073 491 aaPredicted RBP15.16■□□□□ 0.02
TRO-215ENST00000445561 PIP4K2AP48426 406 aaPredicted RBP15.16■□□□□ 0.02
TRO-215ENST00000445561 COL9A3Q14050 684 aaPredicted RBP15.16■□□□□ 0.02
TRO-215ENST00000445561 EVI5LQ96CN4 794 aa15.16■□□□□ 0.02
TRO-215ENST00000445561 SMC3Q9UQE7 1217 aa15.16■□□□□ 0.02
TRO-215ENST00000445561 DDX58O95786 925 aaKnown RBP15.15■□□□□ 0.02
TRO-215ENST00000445561 ERBB3P21860 1342 aa15.15■□□□□ 0.02
TRO-215ENST00000445561 G3BP1Q13283 466 aaKnown RBP eCLIP15.15■□□□□ 0.02
TRO-215ENST00000445561 ZNF790Q6PG37 636 aa15.15■□□□□ 0.02
TRO-215ENST00000445561 PDRG1Q9NUG6 133 aa15.15■□□□□ 0.02
TRO-215ENST00000445561 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.15■□□□□ 0.02
TRO-215ENST00000445561 JARID2Q92833 1246 aaPredicted RBP15.15■□□□□ 0.02
TRO-215ENST00000445561 BOLA2Q9H3K6 86 aa15.15■□□□□ 0.02
TRO-215ENST00000445561 TSPY26PQ9H489 355 aa15.15■□□□□ 0.02
TRO-215ENST00000445561 TCHHQ07283 1943 aa15.14■□□□□ 0.02
TRO-215ENST00000445561 OVOS2A0A0G2JMS6 1433 aa15.14■□□□□ 0.01
TRO-215ENST00000445561 NFATC2IPQ8NCF5 419 aa15.14■□□□□ 0.01
TRO-215ENST00000445561 DDX17Q92841 729 aaKnown RBP15.14■□□□□ 0.01
TRO-215ENST00000445561 NLRP2Q9NX02 1062 aa15.14■□□□□ 0.01
TRO-215ENST00000445561 CCDC171Q6TFL3 1326 aa15.14■□□□□ 0.01
TRO-215ENST00000445561 NMIQ13287 307 aaPredicted RBP15.14■□□□□ 0.01
TRO-215ENST00000445561 SYAP1Q96A49 352 aaPredicted RBP15.14■□□□□ 0.01
TRO-215ENST00000445561 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.14■□□□□ 0.01
TRO-215ENST00000445561 RBM8AQ9Y5S9 174 aaKnown RBP15.14■□□□□ 0.01
TRO-215ENST00000445561 NPHP4O75161 1426 aaPredicted RBP15.13■□□□□ 0.01
TRO-215ENST00000445561 UTYO14607 1347 aa15.13■□□□□ 0.01
TRO-215ENST00000445561 GJB2P29033 226 aa15.13■□□□□ 0.01
TRO-215ENST00000445561 KCNJ4P48050 445 aa15.13■□□□□ 0.01
TRO-215ENST00000445561 NECTIN1Q15223 517 aa15.13■□□□□ 0.01
TRO-215ENST00000445561 XAGE3Q8WTP9 111 aa15.13■□□□□ 0.01
TRO-215ENST00000445561 DNAJC5Q9H3Z4 198 aa15.13■□□□□ 0.01
TRO-215ENST00000445561 HDAC5Q9UQL6 1122 aa15.13■□□□□ 0.01
TRO-215ENST00000445561 FIBPO43427 364 aa15.13■□□□□ 0.01
TRO-215ENST00000445561 EPHA10Q5JZY3 1008 aa15.13■□□□□ 0.01
TRO-215ENST00000445561 VPS53Q5VIR6 699 aa15.13■□□□□ 0.01
TRO-215ENST00000445561 COPS6Q7L5N1 327 aa15.13■□□□□ 0.01
TRO-215ENST00000445561 NECAB1Q8N987 351 aa15.13■□□□□ 0.01
TRO-215ENST00000445561 RAPGEF4Q8WZA2 1011 aa15.13■□□□□ 0.01
TRO-215ENST00000445561 MYD88Q99836 296 aa15.13■□□□□ 0.01
TRO-215ENST00000445561 ZSWIM6Q9HCJ5 1215 aa15.13■□□□□ 0.01
TRO-215ENST00000445561 CYP46A1Q9Y6A2 500 aa15.13■□□□□ 0.01
TRO-215ENST00000445561 A0A0D9SFI3 127 aa15.12■□□□□ 0.01
TRO-215ENST00000445561 F13A1P00488 732 aa15.12■□□□□ 0.01
TRO-215ENST00000445561 ST3GAL1Q11201 340 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms