RNA–Protein interactions for RNA: ENST00000444869.5

COMMD3-202, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 757 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-202ENST00000444869 NUP98P52948 1817 aa18.48■□□□□ 0.55
COMMD3-202ENST00000444869 CHRNA5P30532 468 aa18.47■□□□□ 0.55
COMMD3-202ENST00000444869 BICDL1Q6ZP65 573 aa18.47■□□□□ 0.55
COMMD3-202ENST00000444869 PIM2Q9P1W9 311 aa18.47■□□□□ 0.55
COMMD3-202ENST00000444869 ERBB4Q15303 1308 aa18.46■□□□□ 0.55
COMMD3-202ENST00000444869 NEUROD2Q15784 382 aa18.45■□□□□ 0.54
COMMD3-202ENST00000444869 PRR5LQ6MZQ0 368 aa18.45■□□□□ 0.54
COMMD3-202ENST00000444869 ATP10DQ9P241 1426 aa18.45■□□□□ 0.54
COMMD3-202ENST00000444869 ARFGEF2Q9Y6D5 1785 aa18.45■□□□□ 0.54
COMMD3-202ENST00000444869 CHL1O00533 1208 aa18.44■□□□□ 0.54
COMMD3-202ENST00000444869 SETDB2Q96T68 719 aa18.44■□□□□ 0.54
COMMD3-202ENST00000444869 ZNF652Q9Y2D9 606 aa18.44■□□□□ 0.54
COMMD3-202ENST00000444869 CCDC184Q52MB2 194 aa18.43■□□□□ 0.54
COMMD3-202ENST00000444869 DALRD3Q5D0E6 543 aaKnown RBP18.43■□□□□ 0.54
COMMD3-202ENST00000444869 SBF1O95248 1867 aa18.43■□□□□ 0.54
COMMD3-202ENST00000444869 LRP10Q7Z4F1 713 aa18.42■□□□□ 0.54
COMMD3-202ENST00000444869 CNBD1Q8NA66 436 aa18.42■□□□□ 0.54
COMMD3-202ENST00000444869 BRIP1Q9BX63 1249 aa18.42■□□□□ 0.54
COMMD3-202ENST00000444869 ERVV-1B6SEH8 477 aa18.41■□□□□ 0.54
COMMD3-202ENST00000444869 PDZRN3Q9UPQ7 1066 aa18.41■□□□□ 0.54
COMMD3-202ENST00000444869 CACNA1SQ13698 1873 aa18.41■□□□□ 0.54
COMMD3-202ENST00000444869 ANKRD36CQ5JPF3 1778 aa18.4■□□□□ 0.54
COMMD3-202ENST00000444869 APAF1O14727 1248 aa18.4■□□□□ 0.54
COMMD3-202ENST00000444869 PDIA6Q15084 440 aa18.4■□□□□ 0.54
COMMD3-202ENST00000444869 HLFQ16534 295 aa18.4■□□□□ 0.54
COMMD3-202ENST00000444869 C2CD5Q86YS7 1000 aa18.4■□□□□ 0.54
COMMD3-202ENST00000444869 MAP3K15Q6ZN16 1313 aa18.4■□□□□ 0.54
COMMD3-202ENST00000444869 H0YIN7 160 aa18.39■□□□□ 0.53
COMMD3-202ENST00000444869 PDE6BP35913 854 aa18.39■□□□□ 0.53
COMMD3-202ENST00000444869 TTLL7Q6ZT98 887 aa18.39■□□□□ 0.53
COMMD3-202ENST00000444869 ARHGAP27Q6ZUM4 889 aa18.39■□□□□ 0.53
COMMD3-202ENST00000444869 CFAP44Q96MT7 982 aa18.39■□□□□ 0.53
COMMD3-202ENST00000444869 TNRC6CQ9HCJ0 1690 aaKnown RBP18.38■□□□□ 0.53
COMMD3-202ENST00000444869 ZNF853P0CG23 659 aa18.38■□□□□ 0.53
COMMD3-202ENST00000444869 MYL6BP14649 208 aa18.38■□□□□ 0.53
COMMD3-202ENST00000444869 ST5P78524 1137 aa18.38■□□□□ 0.53
COMMD3-202ENST00000444869 CCDC24Q8N4L8 307 aa18.38■□□□□ 0.53
COMMD3-202ENST00000444869 NIP7Q9Y221 180 aaKnown RBP eCLIP18.38■□□□□ 0.53
COMMD3-202ENST00000444869 FER1L6Q2WGJ9 1857 aa18.37■□□□□ 0.53
COMMD3-202ENST00000444869 KRT24Q2M2I5 525 aa18.37■□□□□ 0.53
COMMD3-202ENST00000444869 NBPF5PQ86XG9 351 aaPredicted RBP18.37■□□□□ 0.53
COMMD3-202ENST00000444869 TTLL6Q8N841 843 aa18.37■□□□□ 0.53
COMMD3-202ENST00000444869 IBTKQ9P2D0 1353 aaPredicted RBP18.37■□□□□ 0.53
COMMD3-202ENST00000444869 ANP32CO43423 234 aa18.36■□□□□ 0.53
COMMD3-202ENST00000444869 HOXB7P09629 217 aa18.36■□□□□ 0.53
COMMD3-202ENST00000444869 KIF6Q6ZMV9 814 aa18.36■□□□□ 0.53
COMMD3-202ENST00000444869 SLX4Q8IY92 1834 aa18.36■□□□□ 0.53
COMMD3-202ENST00000444869 NGEFQ8N5V2 710 aa18.36■□□□□ 0.53
COMMD3-202ENST00000444869 RIC1Q4ADV7 1423 aa18.35■□□□□ 0.53
COMMD3-202ENST00000444869 KLRG2A4D1S0 409 aaPredicted RBP18.35■□□□□ 0.53
COMMD3-202ENST00000444869 SRGNP10124 158 aa18.35■□□□□ 0.53
COMMD3-202ENST00000444869 EIF2S2P20042 333 aaKnown RBP18.35■□□□□ 0.53
COMMD3-202ENST00000444869 PROSER3Q2NL68 480 aa18.35■□□□□ 0.53
COMMD3-202ENST00000444869 LAS1LQ9Y4W2 734 aaKnown RBP18.35■□□□□ 0.53
COMMD3-202ENST00000444869 CCDC88AQ3V6T2 1871 aa18.35■□□□□ 0.53
COMMD3-202ENST00000444869 UBN2Q6ZU65 1347 aa18.34■□□□□ 0.53
COMMD3-202ENST00000444869 NPHP1O15259 732 aa18.34■□□□□ 0.53
COMMD3-202ENST00000444869 STYK1Q6J9G0 422 aa18.34■□□□□ 0.53
COMMD3-202ENST00000444869 TPTE2Q6XPS3 522 aa18.34■□□□□ 0.53
COMMD3-202ENST00000444869 GIGYF2Q6Y7W6 1299 aaKnown RBP18.34■□□□□ 0.53
COMMD3-202ENST00000444869 ZBTB3Q9H5J0 574 aa18.34■□□□□ 0.53
COMMD3-202ENST00000444869 MBIPQ9NS73 344 aa18.34■□□□□ 0.53
COMMD3-202ENST00000444869 IFT57Q9NWB7 429 aa18.34■□□□□ 0.53
COMMD3-202ENST00000444869 TIAM2Q8IVF5 1701 aa18.34■□□□□ 0.53
COMMD3-202ENST00000444869 CALD1Q05682 793 aaKnown RBP18.33■□□□□ 0.52
COMMD3-202ENST00000444869 MRS2Q9HD23 443 aa18.33■□□□□ 0.52
COMMD3-202ENST00000444869 DDX21Q9NR30 783 aaKnown RBP eCLIP18.33■□□□□ 0.52
COMMD3-202ENST00000444869 ABCC12Q96J65 1359 aa18.32■□□□□ 0.52
COMMD3-202ENST00000444869 DICER1Q9UPY3 1922 aaKnown RBP18.32■□□□□ 0.52
COMMD3-202ENST00000444869 ANXA1P04083 346 aa18.32■□□□□ 0.52
COMMD3-202ENST00000444869 GNAI1P63096 354 aa18.32■□□□□ 0.52
COMMD3-202ENST00000444869 C9orf131Q5VYM1 1079 aa18.32■□□□□ 0.52
COMMD3-202ENST00000444869 ZNF34Q8IZ26 560 aa18.32■□□□□ 0.52
COMMD3-202ENST00000444869 ZNF622Q969S3 477 aaKnown RBP eCLIP18.32■□□□□ 0.52
COMMD3-202ENST00000444869 GPBP1L1Q9HC44 474 aaPredicted RBP18.32■□□□□ 0.52
COMMD3-202ENST00000444869 CCDC27Q2M243 656 aa18.31■□□□□ 0.52
COMMD3-202ENST00000444869 MASTLQ96GX5 879 aa18.31■□□□□ 0.52
COMMD3-202ENST00000444869 NYXQ9GZU5 481 aa18.31■□□□□ 0.52
COMMD3-202ENST00000444869 NFKBIEO00221 500 aa18.3■□□□□ 0.52
COMMD3-202ENST00000444869 C1QTNF8P60827 252 aa18.3■□□□□ 0.52
COMMD3-202ENST00000444869 RASSF7Q02833 373 aa18.3■□□□□ 0.52
COMMD3-202ENST00000444869 HDGFL1Q5TGJ6 251 aa18.3■□□□□ 0.52
COMMD3-202ENST00000444869 NECTIN2Q92692 538 aa18.3■□□□□ 0.52
COMMD3-202ENST00000444869 CNKSR1Q969H4 720 aa18.3■□□□□ 0.52
COMMD3-202ENST00000444869 CHPF2Q9P2E5 772 aa18.3■□□□□ 0.52
COMMD3-202ENST00000444869 FAM177BA6PVY3 158 aa18.29■□□□□ 0.52
COMMD3-202ENST00000444869 NTSR2O95665 410 aa18.29■□□□□ 0.52
COMMD3-202ENST00000444869 NPR1P16066 1061 aa18.29■□□□□ 0.52
COMMD3-202ENST00000444869 GPTP24298 496 aa18.29■□□□□ 0.52
COMMD3-202ENST00000444869 PRELPP51888 382 aa18.29■□□□□ 0.52
COMMD3-202ENST00000444869 DUSP27Q5VZP5 1158 aa18.29■□□□□ 0.52
COMMD3-202ENST00000444869 PRPF40BQ6NWY9 871 aaKnown RBP18.29■□□□□ 0.52
COMMD3-202ENST00000444869 COPS6Q7L5N1 327 aa18.29■□□□□ 0.52
COMMD3-202ENST00000444869 XAGE3Q8WTP9 111 aa18.29■□□□□ 0.52
COMMD3-202ENST00000444869 RNF181Q9P0P0 153 aa18.29■□□□□ 0.52
COMMD3-202ENST00000444869 ZC3H4Q9UPT8 1303 aaKnown RBP18.28■□□□□ 0.52
COMMD3-202ENST00000444869 LAMB2P55268 1798 aa18.28■□□□□ 0.52
COMMD3-202ENST00000444869 CRY2Q49AN0 593 aa18.28■□□□□ 0.52
COMMD3-202ENST00000444869 PARP10Q53GL7 1025 aa18.28■□□□□ 0.52
COMMD3-202ENST00000444869 SUSD4Q5VX71 490 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms