RNA–Protein interactions for RNA: ENST00000444688.1

LINC00299-203, long intergenic non-protein coding RNA 299, humanhuman

TSL 4 BASIC

Gene LINC00299, Length 537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-203ENST00000444688 AMIGO3Q86WK7 504 aa16.77■□□□□ 0.28
LINC00299-203ENST00000444688 ARHGEF1Q92888 912 aaKnown RBP16.77■□□□□ 0.28
LINC00299-203ENST00000444688 NARFQ9UHQ1 456 aa16.77■□□□□ 0.28
LINC00299-203ENST00000444688 TBC1D2BQ9UPU7 963 aa16.77■□□□□ 0.28
LINC00299-203ENST00000444688 RNF123Q5XPI4 1314 aa16.76■□□□□ 0.27
LINC00299-203ENST00000444688 PNPLA7Q6ZV29 1317 aa16.76■□□□□ 0.27
LINC00299-203ENST00000444688 PI4KAP2A4QPH2 592 aa16.76■□□□□ 0.27
LINC00299-203ENST00000444688 RFC4P35249 363 aa16.76■□□□□ 0.27
LINC00299-203ENST00000444688 RRP1P56182 461 aaKnown RBP16.76■□□□□ 0.27
LINC00299-203ENST00000444688 RIC3Q7Z5B4 369 aa16.76■□□□□ 0.27
LINC00299-203ENST00000444688 PI4KAP1Q8N8J0 262 aa16.76■□□□□ 0.27
LINC00299-203ENST00000444688 ARXQ96QS3 562 aa16.76■□□□□ 0.27
LINC00299-203ENST00000444688 QSER1Q2KHR3 1735 aa16.76■□□□□ 0.27
LINC00299-203ENST00000444688 ADCY9O60503 1353 aa16.76■□□□□ 0.27
LINC00299-203ENST00000444688 USP42Q9H9J4 1324 aaKnown RBP16.75■□□□□ 0.27
LINC00299-203ENST00000444688 ZPR1O75312 459 aa16.75■□□□□ 0.27
LINC00299-203ENST00000444688 CAMTA2O94983 1202 aa16.75■□□□□ 0.27
LINC00299-203ENST00000444688 MS4A1P11836 297 aa16.75■□□□□ 0.27
LINC00299-203ENST00000444688 ZBTB3Q9H5J0 574 aa16.75■□□□□ 0.27
LINC00299-203ENST00000444688 SOCS7O14512 581 aa16.74■□□□□ 0.27
LINC00299-203ENST00000444688 TRIM27P14373 513 aa16.74■□□□□ 0.27
LINC00299-203ENST00000444688 HSP90AB3PQ58FF7 597 aa16.74■□□□□ 0.27
LINC00299-203ENST00000444688 CLEC4GQ6UXB4 293 aa16.74■□□□□ 0.27
LINC00299-203ENST00000444688 GIGYF2Q6Y7W6 1299 aaKnown RBP16.74■□□□□ 0.27
LINC00299-203ENST00000444688 SMIM5Q71RC9 77 aa16.74■□□□□ 0.27
LINC00299-203ENST00000444688 COL23A1Q86Y22 540 aaPredicted RBP16.74■□□□□ 0.27
LINC00299-203ENST00000444688 DNAAF4Q8WXU2 420 aa16.74■□□□□ 0.27
LINC00299-203ENST00000444688 ZNF652Q9Y2D9 606 aa16.74■□□□□ 0.27
LINC00299-203ENST00000444688 MAP3K2Q9Y2U5 619 aa16.74■□□□□ 0.27
LINC00299-203ENST00000444688 USPL1Q5W0Q7 1092 aa16.73■□□□□ 0.27
LINC00299-203ENST00000444688 METTL22Q9BUU2 404 aaPredicted RBP16.73■□□□□ 0.27
LINC00299-203ENST00000444688 SUPT16HQ9Y5B9 1047 aaKnown RBP16.73■□□□□ 0.27
LINC00299-203ENST00000444688 PXDNLA1KZ92 1463 aa16.73■□□□□ 0.27
LINC00299-203ENST00000444688 TUBGCP6Q96RT7 1819 aa16.73■□□□□ 0.27
LINC00299-203ENST00000444688 ABCC4O15439 1325 aa16.72■□□□□ 0.27
LINC00299-203ENST00000444688 SCN7AQ01118 1682 aa16.72■□□□□ 0.27
LINC00299-203ENST00000444688 F6X3S4 739 aa16.72■□□□□ 0.27
LINC00299-203ENST00000444688 NEXNQ0ZGT2 675 aa16.72■□□□□ 0.27
LINC00299-203ENST00000444688 PDE3AQ14432 1141 aa16.72■□□□□ 0.27
LINC00299-203ENST00000444688 SRP68Q9UHB9 627 aaKnown RBP16.72■□□□□ 0.27
LINC00299-203ENST00000444688 C4AP0C0L4 1744 aa16.72■□□□□ 0.27
LINC00299-203ENST00000444688 BCORQ6W2J9 1755 aa16.72■□□□□ 0.27
LINC00299-203ENST00000444688 ATP10DQ9P241 1426 aa16.71■□□□□ 0.27
LINC00299-203ENST00000444688 MSH5O43196 834 aa16.71■□□□□ 0.27
LINC00299-203ENST00000444688 PLIN1O60240 522 aa16.71■□□□□ 0.27
LINC00299-203ENST00000444688 HLFQ16534 295 aa16.71■□□□□ 0.27
LINC00299-203ENST00000444688 FTSJ3Q8IY81 847 aaKnown RBP16.71■□□□□ 0.27
LINC00299-203ENST00000444688 DZIP1LQ8IYY4 767 aaKnown RBP16.71■□□□□ 0.27
LINC00299-203ENST00000444688 ARFGEF2Q9Y6D5 1785 aa16.7■□□□□ 0.26
LINC00299-203ENST00000444688 GYS1P13807 737 aa16.7■□□□□ 0.26
LINC00299-203ENST00000444688 CCT4P50991 539 aaKnown RBP16.7■□□□□ 0.26
LINC00299-203ENST00000444688 TCIRG1Q13488 830 aa16.7■□□□□ 0.26
LINC00299-203ENST00000444688 SLC16A10Q8TF71 515 aa16.7■□□□□ 0.26
LINC00299-203ENST00000444688 BCL2L12Q9HB09 334 aa16.7■□□□□ 0.26
LINC00299-203ENST00000444688 IBTKQ9P2D0 1353 aaPredicted RBP16.69■□□□□ 0.26
LINC00299-203ENST00000444688 TRIM28Q13263 835 aaKnown RBP16.69■□□□□ 0.26
LINC00299-203ENST00000444688 BEND3Q5T5X7 828 aa16.69■□□□□ 0.26
LINC00299-203ENST00000444688 SLC4A10Q6U841 1118 aa16.69■□□□□ 0.26
LINC00299-203ENST00000444688 LINS1Q8NG48 757 aa16.69■□□□□ 0.26
LINC00299-203ENST00000444688 CLUAP1Q96AJ1 413 aa16.69■□□□□ 0.26
LINC00299-203ENST00000444688 MYD88Q99836 296 aa16.69■□□□□ 0.26
LINC00299-203ENST00000444688 ISCA1Q9BUE6 129 aa16.69■□□□□ 0.26
LINC00299-203ENST00000444688 SRCIN1Q9C0H9 1055 aa16.69■□□□□ 0.26
LINC00299-203ENST00000444688 TNNQ9UQP3 1299 aa16.69■□□□□ 0.26
LINC00299-203ENST00000444688 ALDH1L1O75891 902 aa16.68■□□□□ 0.26
LINC00299-203ENST00000444688 R3HDM1Q15032 1099 aaKnown RBP16.68■□□□□ 0.26
LINC00299-203ENST00000444688 INTS3Q68E01 1043 aaKnown RBP16.68■□□□□ 0.26
LINC00299-203ENST00000444688 ZNF34Q8IZ26 560 aa16.68■□□□□ 0.26
LINC00299-203ENST00000444688 NLGN1Q8N2Q7 840 aa16.68■□□□□ 0.26
LINC00299-203ENST00000444688 PARP10Q53GL7 1025 aa16.67■□□□□ 0.26
LINC00299-203ENST00000444688 CCDC191Q8NCU4 936 aa16.67■□□□□ 0.26
LINC00299-203ENST00000444688 NEURL1BA8MQ27 555 aa16.66■□□□□ 0.26
LINC00299-203ENST00000444688 IGKV5-2P06315 115 aa16.66■□□□□ 0.26
LINC00299-203ENST00000444688 RLBP1P12271 317 aa16.66■□□□□ 0.26
LINC00299-203ENST00000444688 FKBP8Q14318 412 aa16.66■□□□□ 0.26
LINC00299-203ENST00000444688 TMEM57Q8N5G2 664 aa16.66■□□□□ 0.26
LINC00299-203ENST00000444688 PANK1Q8TE04 598 aa16.66■□□□□ 0.26
LINC00299-203ENST00000444688 NIP7Q9Y221 180 aaKnown RBP eCLIP16.66■□□□□ 0.26
LINC00299-203ENST00000444688 NUP98P52948 1817 aa16.66■□□□□ 0.26
LINC00299-203ENST00000444688 ATP5J2-PTCD1G3V325 749 aa16.65■□□□□ 0.26
LINC00299-203ENST00000444688 C20orf194Q5TEA3 1177 aa16.65■□□□□ 0.26
LINC00299-203ENST00000444688 TBC1D9BQ66K14 1250 aa16.65■□□□□ 0.26
LINC00299-203ENST00000444688 NLRP10Q86W26 655 aa16.65■□□□□ 0.26
LINC00299-203ENST00000444688 SETDB2Q96T68 719 aa16.65■□□□□ 0.26
LINC00299-203ENST00000444688 CWC25Q9NXE8 425 aaPredicted RBP16.65■□□□□ 0.26
LINC00299-203ENST00000444688 ANKRD36CQ5JPF3 1778 aa16.64■□□□□ 0.25
LINC00299-203ENST00000444688 N4BP2Q86UW6 1770 aaPredicted RBP16.64■□□□□ 0.25
LINC00299-203ENST00000444688 GPTP24298 496 aa16.64■□□□□ 0.25
LINC00299-203ENST00000444688 MVPQ14764 893 aaKnown RBP16.64■□□□□ 0.25
LINC00299-203ENST00000444688 NFIXQ14938 502 aa16.64■□□□□ 0.25
LINC00299-203ENST00000444688 CWF19L2Q2TBE0 894 aaKnown RBP16.64■□□□□ 0.25
LINC00299-203ENST00000444688 UBN2Q6ZU65 1347 aa16.64■□□□□ 0.25
LINC00299-203ENST00000444688 CARMIL3Q8ND23 1372 aa16.64■□□□□ 0.25
LINC00299-203ENST00000444688 TM4SF1P30408 202 aa16.63■□□□□ 0.25
LINC00299-203ENST00000444688 GCKRQ14397 625 aa16.63■□□□□ 0.25
LINC00299-203ENST00000444688 BICDL1Q6ZP65 573 aa16.63■□□□□ 0.25
LINC00299-203ENST00000444688 PPP1R42Q7Z4L9 355 aa16.63■□□□□ 0.25
LINC00299-203ENST00000444688 ITPRIPQ8IWB1 547 aa16.63■□□□□ 0.25
LINC00299-203ENST00000444688 PDGFDQ9GZP0 370 aaPredicted RBP16.63■□□□□ 0.25
LINC00299-203ENST00000444688 CHMP4BQ9H444 224 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms