RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 LMOD1P29536 600 aaPredicted RBP14.41□□□□□ -0.1
HDAC8-215ENST00000444609 EPS15P42566 896 aa14.41□□□□□ -0.1
HDAC8-215ENST00000444609 PKN2Q16513 984 aaKnown RBP14.41□□□□□ -0.1
HDAC8-215ENST00000444609 CCDC24Q8N4L8 307 aa14.41□□□□□ -0.1
HDAC8-215ENST00000444609 EYA1Q99502 592 aa14.41□□□□□ -0.1
HDAC8-215ENST00000444609 GGNBP2Q9H3C7 697 aa14.41□□□□□ -0.1
HDAC8-215ENST00000444609 RNF186Q9NXI6 227 aa14.41□□□□□ -0.1
HDAC8-215ENST00000444609 ROCK2O75116 1388 aaKnown RBP14.4□□□□□ -0.1
HDAC8-215ENST00000444609 PRR5LQ6MZQ0 368 aa14.4□□□□□ -0.1
HDAC8-215ENST00000444609 MASTLQ96GX5 879 aa14.4□□□□□ -0.1
HDAC8-215ENST00000444609 TRPA1O75762 1119 aa14.39□□□□□ -0.11
HDAC8-215ENST00000444609 SCNN1DP51172 638 aa14.39□□□□□ -0.11
HDAC8-215ENST00000444609 DNAJC10Q8IXB1 793 aa14.39□□□□□ -0.11
HDAC8-215ENST00000444609 COL15A1P39059 1388 aa14.38□□□□□ -0.11
HDAC8-215ENST00000444609 CYP19A1P11511 503 aaPredicted RBP14.38□□□□□ -0.11
HDAC8-215ENST00000444609 IARSP41252 1262 aaKnown RBP14.38□□□□□ -0.11
HDAC8-215ENST00000444609 COLQQ9Y215 455 aaPredicted RBP14.38□□□□□ -0.11
HDAC8-215ENST00000444609 GJA3Q9Y6H8 435 aa14.38□□□□□ -0.11
HDAC8-215ENST00000444609 TBC1D9BQ66K14 1250 aa14.37□□□□□ -0.11
HDAC8-215ENST00000444609 RTKN2Q8IZC4 609 aa14.37□□□□□ -0.11
HDAC8-215ENST00000444609 NFATC2IPQ8NCF5 419 aa14.37□□□□□ -0.11
HDAC8-215ENST00000444609 PITPNM2Q9BZ72 1349 aa14.37□□□□□ -0.11
HDAC8-215ENST00000444609 SLX4Q8IY92 1834 aa14.36□□□□□ -0.11
HDAC8-215ENST00000444609 FAM155AB1AL88 458 aaPredicted RBP14.36□□□□□ -0.11
HDAC8-215ENST00000444609 KIF23Q02241 960 aaPredicted RBP14.36□□□□□ -0.11
HDAC8-215ENST00000444609 EMILIN1Q9Y6C2 1016 aa14.36□□□□□ -0.11
HDAC8-215ENST00000444609 SZT2Q5T011 3432 aa14.35□□□□□ -0.11
HDAC8-215ENST00000444609 EIF6P56537 245 aaKnown RBP14.35□□□□□ -0.11
HDAC8-215ENST00000444609 SYNE4Q8N205 404 aa14.35□□□□□ -0.11
HDAC8-215ENST00000444609 JDP2Q8WYK2 163 aa14.35□□□□□ -0.11
HDAC8-215ENST00000444609 L3MBTL2Q969R5 705 aa14.35□□□□□ -0.11
HDAC8-215ENST00000444609 GLIS2Q9BZE0 524 aaPredicted RBP14.35□□□□□ -0.11
HDAC8-215ENST00000444609 ZNF408Q9H9D4 720 aa14.35□□□□□ -0.11
HDAC8-215ENST00000444609 ZBTB1Q9Y2K1 713 aa14.35□□□□□ -0.11
HDAC8-215ENST00000444609 TRPM7Q96QT4 1865 aa14.35□□□□□ -0.11
HDAC8-215ENST00000444609 A0A0C4DFX4 3053 aa14.35□□□□□ -0.11
HDAC8-215ENST00000444609 HUNKP57058 714 aa14.34□□□□□ -0.11
HDAC8-215ENST00000444609 OLFM4Q6UX06 510 aa14.34□□□□□ -0.11
HDAC8-215ENST00000444609 PGAP2Q9UHJ9 254 aa14.34□□□□□ -0.11
HDAC8-215ENST00000444609 ANKRD31Q8N7Z5 1873 aa14.33□□□□□ -0.11
HDAC8-215ENST00000444609 COL11A2P13942 1736 aaPredicted RBP14.33□□□□□ -0.12
HDAC8-215ENST00000444609 TJP1Q07157 1748 aa14.33□□□□□ -0.12
HDAC8-215ENST00000444609 CUL9Q8IWT3 2517 aa14.33□□□□□ -0.12
HDAC8-215ENST00000444609 ST20-MTHFSA0A0A6YYL1 179 aa14.32□□□□□ -0.12
HDAC8-215ENST00000444609 MTHFSP49914 203 aa14.32□□□□□ -0.12
HDAC8-215ENST00000444609 RGMBQ6NW40 437 aa14.32□□□□□ -0.12
HDAC8-215ENST00000444609 CCDC102AQ96A19 550 aa14.32□□□□□ -0.12
HDAC8-215ENST00000444609 ADARB2Q9NS39 739 aaKnown RBP14.32□□□□□ -0.12
HDAC8-215ENST00000444609 WASHC2AQ641Q2 1341 aa14.32□□□□□ -0.12
HDAC8-215ENST00000444609 MKI67P46013 3256 aaKnown RBP14.32□□□□□ -0.12
HDAC8-215ENST00000444609 PPM1GO15355 546 aaPredicted RBP14.31□□□□□ -0.12
HDAC8-215ENST00000444609 MNX1P50219 401 aaPredicted RBP14.31□□□□□ -0.12
HDAC8-215ENST00000444609 CNBD1Q8NA66 436 aa14.31□□□□□ -0.12
HDAC8-215ENST00000444609 CSRNP1Q96S65 589 aa14.31□□□□□ -0.12
HDAC8-215ENST00000444609 HDAC9Q9UKV0 1011 aa14.31□□□□□ -0.12
HDAC8-215ENST00000444609 NPR1P16066 1061 aa14.3□□□□□ -0.12
HDAC8-215ENST00000444609 ST5P78524 1137 aa14.3□□□□□ -0.12
HDAC8-215ENST00000444609 PLEKHO1Q53GL0 409 aaPredicted RBP14.3□□□□□ -0.12
HDAC8-215ENST00000444609 FBXO46Q6PJ61 603 aaPredicted RBP14.3□□□□□ -0.12
HDAC8-215ENST00000444609 A0A087WZG4 1122 aa14.29□□□□□ -0.12
HDAC8-215ENST00000444609 CANXP27824 592 aaKnown RBP14.29□□□□□ -0.12
HDAC8-215ENST00000444609 EIF5P55010 431 aaKnown RBP14.29□□□□□ -0.12
HDAC8-215ENST00000444609 CDC37L1Q7L3B6 337 aa14.29□□□□□ -0.12
HDAC8-215ENST00000444609 PSMD1Q99460 953 aa14.29□□□□□ -0.12
HDAC8-215ENST00000444609 GPRC5DQ9NZD1 345 aa14.29□□□□□ -0.12
HDAC8-215ENST00000444609 NPHP1O15259 732 aa14.28□□□□□ -0.12
HDAC8-215ENST00000444609 ZNF530Q6P9A1 599 aaPredicted RBP14.28□□□□□ -0.12
HDAC8-215ENST00000444609 ZC3H15Q8WU90 426 aaKnown RBP14.28□□□□□ -0.12
HDAC8-215ENST00000444609 SETDB2Q96T68 719 aa14.28□□□□□ -0.12
HDAC8-215ENST00000444609 KLRG2A4D1S0 409 aaPredicted RBP14.27□□□□□ -0.13
HDAC8-215ENST00000444609 POTEFA5A3E0 1075 aa14.27□□□□□ -0.13
HDAC8-215ENST00000444609 AMOTQ4VCS5 1084 aa14.27□□□□□ -0.13
HDAC8-215ENST00000444609 ZNF296Q8WUU4 475 aaPredicted RBP14.27□□□□□ -0.13
HDAC8-215ENST00000444609 ZNF157P51786 506 aaPredicted RBP14.26□□□□□ -0.13
HDAC8-215ENST00000444609 REM2Q8IYK8 340 aaPredicted RBP14.26□□□□□ -0.13
HDAC8-215ENST00000444609 OTUD5Q96G74 571 aa14.26□□□□□ -0.13
HDAC8-215ENST00000444609 HIRAP54198 1017 aaPredicted RBP14.25□□□□□ -0.13
HDAC8-215ENST00000444609 COL4A5P29400 1685 aa14.25□□□□□ -0.13
HDAC8-215ENST00000444609 SNED1Q8TER0 1413 aa14.24□□□□□ -0.13
HDAC8-215ENST00000444609 ARFGEF2Q9Y6D5 1785 aa14.24□□□□□ -0.13
HDAC8-215ENST00000444609 C1orf141Q5JVX7 400 aa14.24□□□□□ -0.13
HDAC8-215ENST00000444609 USP48Q86UV5 1035 aa14.24□□□□□ -0.13
HDAC8-215ENST00000444609 TBC1D2BQ9UPU7 963 aa14.24□□□□□ -0.13
HDAC8-215ENST00000444609 CACNA1SQ13698 1873 aa14.23□□□□□ -0.13
HDAC8-215ENST00000444609 SLC10A3P09131 477 aa14.23□□□□□ -0.13
HDAC8-215ENST00000444609 EIF4A2Q14240 407 aaKnown RBP14.23□□□□□ -0.13
HDAC8-215ENST00000444609 INTS3Q68E01 1043 aaKnown RBP14.23□□□□□ -0.13
HDAC8-215ENST00000444609 DLK2Q6UY11 383 aa14.23□□□□□ -0.13
HDAC8-215ENST00000444609 VSIG10Q8N0Z9 540 aa14.23□□□□□ -0.13
HDAC8-215ENST00000444609 LARGE2Q8N3Y3 721 aa14.23□□□□□ -0.13
HDAC8-215ENST00000444609 CARD11Q9BXL7 1154 aa14.23□□□□□ -0.13
HDAC8-215ENST00000444609 ALDH1B1P30837 517 aa14.22□□□□□ -0.13
HDAC8-215ENST00000444609 C2orf69Q8N8R5 385 aa14.22□□□□□ -0.13
HDAC8-215ENST00000444609 GBA2Q9HCG7 927 aaPredicted RBP14.22□□□□□ -0.13
HDAC8-215ENST00000444609 BCORQ6W2J9 1755 aa14.22□□□□□ -0.13
HDAC8-215ENST00000444609 TRIOBPQ9H2D6 2365 aa14.21□□□□□ -0.13
HDAC8-215ENST00000444609 TBC1D8O95759 1140 aa14.21□□□□□ -0.13
HDAC8-215ENST00000444609 SLC39A6Q13433 755 aa14.21□□□□□ -0.13
HDAC8-215ENST00000444609 CC2D2BQ6DHV5 1058 aa14.21□□□□□ -0.13
HDAC8-215ENST00000444609 COL6A3P12111 3177 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms