RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 DBF4Q9UBU7 674 aaPredicted RBP22.56■■□□□ 1.2
SMARCAL1-209ENST00000444508 C10orf71Q711Q0 1435 aa22.56■■□□□ 1.2
SMARCAL1-209ENST00000444508 FANCIQ9NVI1 1328 aa22.56■■□□□ 1.2
SMARCAL1-209ENST00000444508 CARMIL3Q8ND23 1372 aa22.55■■□□□ 1.2
SMARCAL1-209ENST00000444508 ERVV-1B6SEH8 477 aa22.55■■□□□ 1.2
SMARCAL1-209ENST00000444508 SERPINB2P05120 415 aa22.55■■□□□ 1.2
SMARCAL1-209ENST00000444508 TTLL7Q6ZT98 887 aa22.55■■□□□ 1.2
SMARCAL1-209ENST00000444508 MAP3K15Q6ZN16 1313 aa22.55■■□□□ 1.2
SMARCAL1-209ENST00000444508 KIF13BQ9NQT8 1826 aa22.54■■□□□ 1.2
SMARCAL1-209ENST00000444508 GOLGA2Q08379 1002 aa22.54■■□□□ 1.2
SMARCAL1-209ENST00000444508 AFDNP55196 1824 aaKnown RBP22.53■■□□□ 1.2
SMARCAL1-209ENST00000444508 LRP10Q7Z4F1 713 aa22.53■■□□□ 1.2
SMARCAL1-209ENST00000444508 ZBTB3Q9H5J0 574 aa22.53■■□□□ 1.2
SMARCAL1-209ENST00000444508 ZNF521Q96K83 1311 aa22.53■■□□□ 1.2
SMARCAL1-209ENST00000444508 AIMP1Q12904 312 aaKnown RBP22.52■■□□□ 1.2
SMARCAL1-209ENST00000444508 HLFQ16534 295 aa22.52■■□□□ 1.2
SMARCAL1-209ENST00000444508 TWISTNBQ3B726 338 aaPredicted RBP22.52■■□□□ 1.2
SMARCAL1-209ENST00000444508 TSPYL6Q8N831 410 aa22.52■■□□□ 1.2
SMARCAL1-209ENST00000444508 XAGE3Q8WTP9 111 aa22.52■■□□□ 1.2
SMARCAL1-209ENST00000444508 HYPKQ9NX55 129 aa22.52■■□□□ 1.2
SMARCAL1-209ENST00000444508 NRXN2Q9P2S2 1712 aa22.51■■□□□ 1.19
SMARCAL1-209ENST00000444508 NPHP1O15259 732 aa22.51■■□□□ 1.19
SMARCAL1-209ENST00000444508 TGFB2P61812 414 aa22.51■■□□□ 1.19
SMARCAL1-209ENST00000444508 CCDC30Q5VVM6 783 aa22.51■■□□□ 1.19
SMARCAL1-209ENST00000444508 COPS6Q7L5N1 327 aa22.51■■□□□ 1.19
SMARCAL1-209ENST00000444508 NIP7Q9Y221 180 aaKnown RBP eCLIP22.51■■□□□ 1.19
SMARCAL1-209ENST00000444508 NUP98P52948 1817 aa22.5■■□□□ 1.19
SMARCAL1-209ENST00000444508 PELP1Q8IZL8 1130 aaKnown RBP22.5■■□□□ 1.19
SMARCAL1-209ENST00000444508 SPINK5Q9NQ38 1064 aaPredicted RBP22.5■■□□□ 1.19
SMARCAL1-209ENST00000444508 EXOSC9Q06265 439 aaKnown RBP22.48■■□□□ 1.19
SMARCAL1-209ENST00000444508 GPR162Q16538 588 aa22.48■■□□□ 1.19
SMARCAL1-209ENST00000444508 GIGYF2Q6Y7W6 1299 aaKnown RBP22.48■■□□□ 1.19
SMARCAL1-209ENST00000444508 NBPF5PQ86XG9 351 aaPredicted RBP22.48■■□□□ 1.19
SMARCAL1-209ENST00000444508 CNBD1Q8NA66 436 aa22.48■■□□□ 1.19
SMARCAL1-209ENST00000444508 STK31Q9BXU1 1019 aa22.48■■□□□ 1.19
SMARCAL1-209ENST00000444508 ATP10DQ9P241 1426 aa22.48■■□□□ 1.19
SMARCAL1-209ENST00000444508 PXDNLA1KZ92 1463 aa22.47■■□□□ 1.19
SMARCAL1-209ENST00000444508 E9PSI1 815 aa22.47■■□□□ 1.19
SMARCAL1-209ENST00000444508 N4BP2Q86UW6 1770 aaPredicted RBP22.46■■□□□ 1.19
SMARCAL1-209ENST00000444508 ST5P78524 1137 aa22.46■■□□□ 1.19
SMARCAL1-209ENST00000444508 PRR5LQ6MZQ0 368 aa22.46■■□□□ 1.19
SMARCAL1-209ENST00000444508 KIAA1551Q9HCM1 1747 aa22.45■■□□□ 1.19
SMARCAL1-209ENST00000444508 A0A0G2JLW4 131 aa22.45■■□□□ 1.18
SMARCAL1-209ENST00000444508 HSP90AB3PQ58FF7 597 aa22.45■■□□□ 1.18
SMARCAL1-209ENST00000444508 FAM177BA6PVY3 158 aa22.44■■□□□ 1.18
SMARCAL1-209ENST00000444508 DPEP1P16444 411 aa22.44■■□□□ 1.18
SMARCAL1-209ENST00000444508 GPTP24298 496 aa22.44■■□□□ 1.18
SMARCAL1-209ENST00000444508 TPTE2Q6XPS3 522 aa22.44■■□□□ 1.18
SMARCAL1-209ENST00000444508 ANKRD13DQ6ZTN6 518 aa22.44■■□□□ 1.18
SMARCAL1-209ENST00000444508 PLBD2Q8NHP8 589 aa22.44■■□□□ 1.18
SMARCAL1-209ENST00000444508 NYXQ9GZU5 481 aa22.43■■□□□ 1.18
SMARCAL1-209ENST00000444508 PHAXQ9H814 394 aaKnown RBP22.43■■□□□ 1.18
SMARCAL1-209ENST00000444508 TCERG1O14776 1098 aaKnown RBP22.42■■□□□ 1.18
SMARCAL1-209ENST00000444508 VAMP4O75379 141 aa22.42■■□□□ 1.18
SMARCAL1-209ENST00000444508 GTF2E1P29083 439 aaPredicted RBP22.42■■□□□ 1.18
SMARCAL1-209ENST00000444508 PDE6BP35913 854 aa22.42■■□□□ 1.18
SMARCAL1-209ENST00000444508 PARP10Q53GL7 1025 aa22.42■■□□□ 1.18
SMARCAL1-209ENST00000444508 ZNF34Q8IZ26 560 aa22.42■■□□□ 1.18
SMARCAL1-209ENST00000444508 CCDC24Q8N4L8 307 aa22.42■■□□□ 1.18
SMARCAL1-209ENST00000444508 BRIP1Q9BX63 1249 aa22.42■■□□□ 1.18
SMARCAL1-209ENST00000444508 WWC3Q9ULE0 1092 aa22.42■■□□□ 1.18
SMARCAL1-209ENST00000444508 ANKRD36CQ5JPF3 1778 aa22.42■■□□□ 1.18
SMARCAL1-209ENST00000444508 CHRNA5P30532 468 aa22.41■■□□□ 1.18
SMARCAL1-209ENST00000444508 SLFN5Q08AF3 891 aa22.41■■□□□ 1.18
SMARCAL1-209ENST00000444508 UBN2Q6ZU65 1347 aa22.4■■□□□ 1.18
SMARCAL1-209ENST00000444508 DDX58O95786 925 aaKnown RBP22.4■■□□□ 1.18
SMARCAL1-209ENST00000444508 SLC4A2P04920 1241 aa22.4■■□□□ 1.18
SMARCAL1-209ENST00000444508 TCIRG1Q13488 830 aa22.4■■□□□ 1.18
SMARCAL1-209ENST00000444508 PPP1R42Q7Z4L9 355 aa22.4■■□□□ 1.18
SMARCAL1-209ENST00000444508 RIC3Q7Z5B4 369 aa22.4■■□□□ 1.18
SMARCAL1-209ENST00000444508 C2CD5Q86YS7 1000 aa22.4■■□□□ 1.18
SMARCAL1-209ENST00000444508 PIM2Q9P1W9 311 aa22.4■■□□□ 1.18
SMARCAL1-209ENST00000444508 PDZRN3Q9UPQ7 1066 aa22.4■■□□□ 1.18
SMARCAL1-209ENST00000444508 IBTKQ9P2D0 1353 aaPredicted RBP22.39■■□□□ 1.18
SMARCAL1-209ENST00000444508 ANKRD31Q8N7Z5 1873 aa22.39■■□□□ 1.18
SMARCAL1-209ENST00000444508 H0YIN7 160 aa22.39■■□□□ 1.17
SMARCAL1-209ENST00000444508 GRIN3BO60391 1043 aa22.39■■□□□ 1.17
SMARCAL1-209ENST00000444508 YBX3P16989 372 aaKnown RBP eCLIP22.39■■□□□ 1.17
SMARCAL1-209ENST00000444508 HNRNPUQ00839 825 aaKnown RBP eCLIP22.39■■□□□ 1.17
SMARCAL1-209ENST00000444508 ARFGEF2Q9Y6D5 1785 aa22.38■■□□□ 1.17
SMARCAL1-209ENST00000444508 SUSD4Q5VX71 490 aa22.38■■□□□ 1.17
SMARCAL1-209ENST00000444508 CDCA7LQ96GN5 454 aa22.38■■□□□ 1.17
SMARCAL1-209ENST00000444508 CACNA1FO60840 1977 aa22.38■■□□□ 1.17
SMARCAL1-209ENST00000444508 GOLGB1Q14789 3259 aaKnown RBP22.37■■□□□ 1.17
SMARCAL1-209ENST00000444508 BRCA1P38398 1863 aaKnown RBP22.37■■□□□ 1.17
SMARCAL1-209ENST00000444508 KCNA3P22001 575 aa22.37■■□□□ 1.17
SMARCAL1-209ENST00000444508 BCS1LQ9Y276 419 aa22.37■■□□□ 1.17
SMARCAL1-209ENST00000444508 DLEC1Q9Y238 1755 aa22.36■■□□□ 1.17
SMARCAL1-209ENST00000444508 DALRD3Q5D0E6 543 aaKnown RBP22.36■■□□□ 1.17
SMARCAL1-209ENST00000444508 NUTM1Q86Y26 1132 aa22.36■■□□□ 1.17
SMARCAL1-209ENST00000444508 UTP14AQ9BVJ6 771 aaKnown RBP22.36■■□□□ 1.17
SMARCAL1-209ENST00000444508 NTSR2O95665 410 aa22.35■■□□□ 1.17
SMARCAL1-209ENST00000444508 NLRP10Q86W26 655 aa22.35■■□□□ 1.17
SMARCAL1-209ENST00000444508 RNF123Q5XPI4 1314 aa22.34■■□□□ 1.17
SMARCAL1-209ENST00000444508 ERFEQ4G0M1 354 aa22.34■■□□□ 1.17
SMARCAL1-209ENST00000444508 ATP5J2-PTCD1G3V325 749 aa22.33■■□□□ 1.17
SMARCAL1-209ENST00000444508 FLIIQ13045 1269 aa22.33■■□□□ 1.17
SMARCAL1-209ENST00000444508 KSR2Q6VAB6 950 aa22.33■■□□□ 1.17
SMARCAL1-209ENST00000444508 G2E3Q7L622 706 aa22.33■■□□□ 1.17
SMARCAL1-209ENST00000444508 TRMT2AQ8IZ69 625 aaKnown RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms