RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 GGNBP2Q9H3C7 697 aa20.12■□□□□ 0.81
SYNCRIP-203ENST00000444272 KIF24Q5T7B8 1368 aa20.11■□□□□ 0.81
SYNCRIP-203ENST00000444272 CABP4P57796 275 aa20.11■□□□□ 0.81
SYNCRIP-203ENST00000444272 FZD9O00144 591 aa20.1■□□□□ 0.81
SYNCRIP-203ENST00000444272 LMOD1P29536 600 aaPredicted RBP20.1■□□□□ 0.81
SYNCRIP-203ENST00000444272 CCDC93Q567U6 631 aa20.1■□□□□ 0.81
SYNCRIP-203ENST00000444272 SCN11AQ9UI33 1791 aa20.1■□□□□ 0.81
SYNCRIP-203ENST00000444272 COL6A3P12111 3177 aa20.09■□□□□ 0.81
SYNCRIP-203ENST00000444272 FKBP4Q02790 459 aaKnown RBP eCLIP20.09■□□□□ 0.81
SYNCRIP-203ENST00000444272 SAGE1Q9NXZ1 904 aa20.09■□□□□ 0.81
SYNCRIP-203ENST00000444272 GJA3Q9Y6H8 435 aa20.09■□□□□ 0.81
SYNCRIP-203ENST00000444272 BCORQ6W2J9 1755 aa20.08■□□□□ 0.8
SYNCRIP-203ENST00000444272 EPS15P42566 896 aa20.07■□□□□ 0.8
SYNCRIP-203ENST00000444272 AKAP4Q5JQC9 854 aa20.07■□□□□ 0.8
SYNCRIP-203ENST00000444272 STYK1Q6J9G0 422 aa20.07■□□□□ 0.8
SYNCRIP-203ENST00000444272 PRR5LQ6MZQ0 368 aa20.07■□□□□ 0.8
SYNCRIP-203ENST00000444272 DNAJC10Q8IXB1 793 aa20.07■□□□□ 0.8
SYNCRIP-203ENST00000444272 EYA1Q99502 592 aa20.07■□□□□ 0.8
SYNCRIP-203ENST00000444272 FYB1O15117 783 aa20.06■□□□□ 0.8
SYNCRIP-203ENST00000444272 TRPA1O75762 1119 aa20.06■□□□□ 0.8
SYNCRIP-203ENST00000444272 ZNF408Q9H9D4 720 aa20.06■□□□□ 0.8
SYNCRIP-203ENST00000444272 ANKRD26Q9UPS8 1709 aa20.06■□□□□ 0.8
SYNCRIP-203ENST00000444272 EMILIN1Q9Y6C2 1016 aa20.06■□□□□ 0.8
SYNCRIP-203ENST00000444272 HSP90AB1P08238 724 aaKnown RBP20.05■□□□□ 0.8
SYNCRIP-203ENST00000444272 SRGNP10124 158 aa20.05■□□□□ 0.8
SYNCRIP-203ENST00000444272 SCNN1DP51172 638 aa20.05■□□□□ 0.8
SYNCRIP-203ENST00000444272 USP50Q70EL3 339 aaPredicted RBP20.05■□□□□ 0.8
SYNCRIP-203ENST00000444272 AKAP11Q9UKA4 1901 aa20.05■□□□□ 0.8
SYNCRIP-203ENST00000444272 IARSP41252 1262 aaKnown RBP20.04■□□□□ 0.8
SYNCRIP-203ENST00000444272 C7orf43Q8WVR3 580 aa20.04■□□□□ 0.8
SYNCRIP-203ENST00000444272 MASTLQ96GX5 879 aa20.04■□□□□ 0.8
SYNCRIP-203ENST00000444272 RNF186Q9NXI6 227 aa20.04■□□□□ 0.8
SYNCRIP-203ENST00000444272 TBC1D9BQ66K14 1250 aa20.03■□□□□ 0.8
SYNCRIP-203ENST00000444272 ZBTB1Q9Y2K1 713 aa20.03■□□□□ 0.8
SYNCRIP-203ENST00000444272 OLFM4Q6UX06 510 aa20.02■□□□□ 0.8
SYNCRIP-203ENST00000444272 SYNE4Q8N205 404 aa20.02■□□□□ 0.8
SYNCRIP-203ENST00000444272 GLIS2Q9BZE0 524 aaPredicted RBP20.02■□□□□ 0.8
SYNCRIP-203ENST00000444272 PPM1GO15355 546 aaPredicted RBP20.01■□□□□ 0.79
SYNCRIP-203ENST00000444272 NFATC2IPQ8NCF5 419 aa20.01■□□□□ 0.79
SYNCRIP-203ENST00000444272 COLQQ9Y215 455 aaPredicted RBP20.01■□□□□ 0.79
SYNCRIP-203ENST00000444272 KIF20BQ96Q89 1820 aa20■□□□□ 0.79
SYNCRIP-203ENST00000444272 CYP19A1P11511 503 aaPredicted RBP20■□□□□ 0.79
SYNCRIP-203ENST00000444272 EIF6P56537 245 aaKnown RBP20■□□□□ 0.79
SYNCRIP-203ENST00000444272 JDP2Q8WYK2 163 aa20■□□□□ 0.79
SYNCRIP-203ENST00000444272 L3MBTL2Q969R5 705 aa20■□□□□ 0.79
SYNCRIP-203ENST00000444272 NPHP1O15259 732 aa19.99■□□□□ 0.79
SYNCRIP-203ENST00000444272 HUNKP57058 714 aa19.99■□□□□ 0.79
SYNCRIP-203ENST00000444272 PKN2Q16513 984 aaKnown RBP19.99■□□□□ 0.79
SYNCRIP-203ENST00000444272 BRCA2P51587 3418 aa19.99■□□□□ 0.79
SYNCRIP-203ENST00000444272 KIF23Q02241 960 aaPredicted RBP19.98■□□□□ 0.79
SYNCRIP-203ENST00000444272 PUS7Q96PZ0 661 aaKnown RBP19.98■□□□□ 0.79
SYNCRIP-203ENST00000444272 COL4A5P29400 1685 aa19.97■□□□□ 0.79
SYNCRIP-203ENST00000444272 FAM155AB1AL88 458 aaPredicted RBP19.97■□□□□ 0.79
SYNCRIP-203ENST00000444272 RTKN2Q8IZC4 609 aa19.97■□□□□ 0.79
SYNCRIP-203ENST00000444272 CNBD1Q8NA66 436 aa19.97■□□□□ 0.79
SYNCRIP-203ENST00000444272 SCN7AQ01118 1682 aa19.97■□□□□ 0.79
SYNCRIP-203ENST00000444272 TRIOBPQ9H2D6 2365 aa19.97■□□□□ 0.79
SYNCRIP-203ENST00000444272 CENPFP49454 3210 aa19.97■□□□□ 0.79
SYNCRIP-203ENST00000444272 ST5P78524 1137 aa19.96■□□□□ 0.79
SYNCRIP-203ENST00000444272 ST20-MTHFSA0A0A6YYL1 179 aa19.95■□□□□ 0.78
SYNCRIP-203ENST00000444272 MTHFSP49914 203 aa19.95■□□□□ 0.78
SYNCRIP-203ENST00000444272 ZNF530Q6P9A1 599 aaPredicted RBP19.95■□□□□ 0.78
SYNCRIP-203ENST00000444272 PITPNM2Q9BZ72 1349 aa19.95■□□□□ 0.78
SYNCRIP-203ENST00000444272 ADARB2Q9NS39 739 aaKnown RBP19.94■□□□□ 0.78
SYNCRIP-203ENST00000444272 HDAC9Q9UKV0 1011 aa19.94■□□□□ 0.78
SYNCRIP-203ENST00000444272 CANXP27824 592 aaKnown RBP19.93■□□□□ 0.78
SYNCRIP-203ENST00000444272 RGMBQ6NW40 437 aa19.93■□□□□ 0.78
SYNCRIP-203ENST00000444272 WASHC2AQ641Q2 1341 aa19.92■□□□□ 0.78
SYNCRIP-203ENST00000444272 HTTP42858 3142 aa19.92■□□□□ 0.78
SYNCRIP-203ENST00000444272 PLEKHO1Q53GL0 409 aaPredicted RBP19.91■□□□□ 0.78
SYNCRIP-203ENST00000444272 NPR1P16066 1061 aa19.9■□□□□ 0.78
SYNCRIP-203ENST00000444272 FBXO46Q6PJ61 603 aaPredicted RBP19.9■□□□□ 0.78
SYNCRIP-203ENST00000444272 CCDC102AQ96A19 550 aa19.9■□□□□ 0.78
SYNCRIP-203ENST00000444272 RANBP2P49792 3224 aaKnown RBP19.89■□□□□ 0.77
SYNCRIP-203ENST00000444272 CSRNP1Q96S65 589 aa19.89■□□□□ 0.77
SYNCRIP-203ENST00000444272 GPRC5DQ9NZD1 345 aa19.89■□□□□ 0.77
SYNCRIP-203ENST00000444272 A0A087WZG4 1122 aa19.88■□□□□ 0.77
SYNCRIP-203ENST00000444272 POTEFA5A3E0 1075 aa19.88■□□□□ 0.77
SYNCRIP-203ENST00000444272 MNX1P50219 401 aaPredicted RBP19.88■□□□□ 0.77
SYNCRIP-203ENST00000444272 CDC37L1Q7L3B6 337 aa19.88■□□□□ 0.77
SYNCRIP-203ENST00000444272 ZNF296Q8WUU4 475 aaPredicted RBP19.88■□□□□ 0.77
SYNCRIP-203ENST00000444272 SETDB2Q96T68 719 aa19.88■□□□□ 0.77
SYNCRIP-203ENST00000444272 ZNF157P51786 506 aaPredicted RBP19.87■□□□□ 0.77
SYNCRIP-203ENST00000444272 EIF5P55010 431 aaKnown RBP19.87■□□□□ 0.77
SYNCRIP-203ENST00000444272 C1orf141Q5JVX7 400 aa19.87■□□□□ 0.77
SYNCRIP-203ENST00000444272 PSMD1Q99460 953 aa19.87■□□□□ 0.77
SYNCRIP-203ENST00000444272 CARD11Q9BXL7 1154 aa19.87■□□□□ 0.77
SYNCRIP-203ENST00000444272 PGAP2Q9UHJ9 254 aa19.87■□□□□ 0.77
SYNCRIP-203ENST00000444272 PAPPA2Q9BXP8 1791 aa19.87■□□□□ 0.77
SYNCRIP-203ENST00000444272 SNED1Q8TER0 1413 aa19.86■□□□□ 0.77
SYNCRIP-203ENST00000444272 TBC1D2BQ9UPU7 963 aa19.86■□□□□ 0.77
SYNCRIP-203ENST00000444272 UNC80Q8N2C7 3258 aa19.86■□□□□ 0.77
SYNCRIP-203ENST00000444272 SLC39A6Q13433 755 aa19.85■□□□□ 0.77
SYNCRIP-203ENST00000444272 EIF4A2Q14240 407 aaKnown RBP19.85■□□□□ 0.77
SYNCRIP-203ENST00000444272 DLK2Q6UY11 383 aa19.85■□□□□ 0.77
SYNCRIP-203ENST00000444272 LARGE2Q8N3Y3 721 aa19.85■□□□□ 0.77
SYNCRIP-203ENST00000444272 AMOTQ4VCS5 1084 aa19.84■□□□□ 0.77
SYNCRIP-203ENST00000444272 ZNF330Q9Y3S2 320 aaPredicted RBP19.84■□□□□ 0.77
SYNCRIP-203ENST00000444272 CEP290O15078 2479 aa19.84■□□□□ 0.77
SYNCRIP-203ENST00000444272 RBBP6Q7Z6E9 1792 aaKnown RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms