RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 STAG2Q8N3U4 1231 aa8.68□□□□□ -1.02
AC003001.1-201ENST00000443247 RHPN1Q8TCX5 695 aa8.68□□□□□ -1.02
AC003001.1-201ENST00000443247 CFHR5Q9BXR6 569 aa8.68□□□□□ -1.02
AC003001.1-201ENST00000443247 GJA3Q9Y6H8 435 aa8.68□□□□□ -1.02
AC003001.1-201ENST00000443247 PRMT3O60678 531 aa8.67□□□□□ -1.02
AC003001.1-201ENST00000443247 PPP1R15AO75807 674 aaPredicted RBP8.67□□□□□ -1.02
AC003001.1-201ENST00000443247 FAM69CQ0P6D2 419 aa8.67□□□□□ -1.02
AC003001.1-201ENST00000443247 NLRP8Q86W28 1048 aa8.67□□□□□ -1.02
AC003001.1-201ENST00000443247 NGLY1Q96IV0 654 aa8.67□□□□□ -1.02
AC003001.1-201ENST00000443247 IGF1RP08069 1367 aa8.66□□□□□ -1.02
AC003001.1-201ENST00000443247 MX2P20592 715 aa8.66□□□□□ -1.02
AC003001.1-201ENST00000443247 FIGNL1Q6PIW4 674 aa8.66□□□□□ -1.02
AC003001.1-201ENST00000443247 ALDH16A1Q8IZ83 802 aa8.66□□□□□ -1.02
AC003001.1-201ENST00000443247 KLRG1Q96E93 195 aa8.66□□□□□ -1.02
AC003001.1-201ENST00000443247 ABHD17AQ96GS6 310 aa8.66□□□□□ -1.02
AC003001.1-201ENST00000443247 PRIMPOLQ96LW4 560 aa8.66□□□□□ -1.02
AC003001.1-201ENST00000443247 ZCCHC2Q9C0B9 1178 aaKnown RBP8.66□□□□□ -1.02
AC003001.1-201ENST00000443247 NSFL1CQ9UNZ2 370 aaKnown RBP8.66□□□□□ -1.02
AC003001.1-201ENST00000443247 PHF24Q9UPV7 400 aa8.66□□□□□ -1.02
AC003001.1-201ENST00000443247 C1orf53Q5VUE5 145 aa8.65□□□□□ -1.02
AC003001.1-201ENST00000443247 GPC6Q9Y625 555 aaPredicted RBP8.65□□□□□ -1.02
AC003001.1-201ENST00000443247 ATXN7O15265 892 aaPredicted RBP8.64□□□□□ -1.03
AC003001.1-201ENST00000443247 FOXO3O43524 673 aa8.64□□□□□ -1.03
AC003001.1-201ENST00000443247 BNIP3LO60238 219 aa8.64□□□□□ -1.03
AC003001.1-201ENST00000443247 LYPD4Q6UWN0 246 aa8.64□□□□□ -1.03
AC003001.1-201ENST00000443247 LRRC69Q6ZNQ3 347 aa8.64□□□□□ -1.03
AC003001.1-201ENST00000443247 C7orf43Q8WVR3 580 aa8.64□□□□□ -1.03
AC003001.1-201ENST00000443247 VTI1AQ96AJ9 217 aa8.64□□□□□ -1.03
AC003001.1-201ENST00000443247 NEUROD4Q9HD90 331 aa8.64□□□□□ -1.03
AC003001.1-201ENST00000443247 NDFIP2Q9NV92 336 aa8.64□□□□□ -1.03
AC003001.1-201ENST00000443247 ATXN7L1Q9ULK2 861 aaPredicted RBP8.64□□□□□ -1.03
AC003001.1-201ENST00000443247 PCDHGC4Q9Y5F7 938 aa8.64□□□□□ -1.03
AC003001.1-201ENST00000443247 DCDC2BA2VCK2 349 aa8.63□□□□□ -1.03
AC003001.1-201ENST00000443247 CELA2BP08218 269 aaPredicted RBP8.63□□□□□ -1.03
AC003001.1-201ENST00000443247 FKBP5Q13451 457 aaPredicted RBP8.63□□□□□ -1.03
AC003001.1-201ENST00000443247 OCLNQ16625 522 aa8.63□□□□□ -1.03
AC003001.1-201ENST00000443247 HSH2DQ96JZ2 352 aa8.63□□□□□ -1.03
AC003001.1-201ENST00000443247 FGFR3P22607 806 aa8.62□□□□□ -1.03
AC003001.1-201ENST00000443247 IRS1P35568 1242 aa8.62□□□□□ -1.03
AC003001.1-201ENST00000443247 MAP3K10Q02779 954 aa8.62□□□□□ -1.03
AC003001.1-201ENST00000443247 CLP1Q92989 425 aaKnown RBP8.62□□□□□ -1.03
AC003001.1-201ENST00000443247 KHNYNO15037 678 aaKnown RBP8.61□□□□□ -1.03
AC003001.1-201ENST00000443247 MAP2K3P46734 347 aa8.61□□□□□ -1.03
AC003001.1-201ENST00000443247 RTN1Q16799 776 aa8.61□□□□□ -1.03
AC003001.1-201ENST00000443247 SAMD5Q5TGI4 173 aa8.61□□□□□ -1.03
AC003001.1-201ENST00000443247 SLAIN2Q9P270 581 aa8.61□□□□□ -1.03
AC003001.1-201ENST00000443247 FAM157BP0CG42 384 aa8.6□□□□□ -1.03
AC003001.1-201ENST00000443247 MAPTP10636 758 aaKnown RBP8.6□□□□□ -1.03
AC003001.1-201ENST00000443247 TNP2Q05952 138 aa8.6□□□□□ -1.03
AC003001.1-201ENST00000443247 ZNF280CQ8ND82 737 aa8.6□□□□□ -1.03
AC003001.1-201ENST00000443247 ACDQ96AP0 544 aa8.6□□□□□ -1.03
AC003001.1-201ENST00000443247 SUSD3Q96L08 255 aa8.6□□□□□ -1.03
AC003001.1-201ENST00000443247 QTRT2Q9H974 415 aaKnown RBP8.6□□□□□ -1.03
AC003001.1-201ENST00000443247 ENAMQ9NRM1 1142 aa8.6□□□□□ -1.03
AC003001.1-201ENST00000443247 CXXC1Q9P0U4 656 aaPredicted RBP8.6□□□□□ -1.03
AC003001.1-201ENST00000443247 DNMT3AQ9Y6K1 912 aaPredicted RBP8.6□□□□□ -1.03
AC003001.1-201ENST00000443247 BCRP11274 1271 aa8.59□□□□□ -1.03
AC003001.1-201ENST00000443247 MKNK1Q9BUB5 465 aa8.59□□□□□ -1.03
AC003001.1-201ENST00000443247 ANKIB1Q9P2G1 1089 aa8.59□□□□□ -1.03
AC003001.1-201ENST00000443247 TMEM88BA6NKF7 163 aa8.58□□□□□ -1.04
AC003001.1-201ENST00000443247 BMP4P12644 408 aa8.58□□□□□ -1.04
AC003001.1-201ENST00000443247 CD33P20138 364 aa8.58□□□□□ -1.04
AC003001.1-201ENST00000443247 ATP2B4P23634 1241 aa8.58□□□□□ -1.04
AC003001.1-201ENST00000443247 MARSP56192 900 aaKnown RBP8.58□□□□□ -1.04
AC003001.1-201ENST00000443247 CTBSQ01459 385 aa8.58□□□□□ -1.04
AC003001.1-201ENST00000443247 HIF1AQ16665 826 aa8.58□□□□□ -1.04
AC003001.1-201ENST00000443247 LRRC4BQ9NT99 713 aa8.58□□□□□ -1.04
AC003001.1-201ENST00000443247 HCN2Q9UL51 889 aa8.58□□□□□ -1.04
AC003001.1-201ENST00000443247 CARNS1A5YM72 827 aa8.57□□□□□ -1.04
AC003001.1-201ENST00000443247 EFSO43281 561 aa8.57□□□□□ -1.04
AC003001.1-201ENST00000443247 DGKZQ13574 1117 aa8.57□□□□□ -1.04
AC003001.1-201ENST00000443247 KANK3Q6NY19 840 aa8.57□□□□□ -1.04
AC003001.1-201ENST00000443247 CEP63Q96MT8 703 aa8.57□□□□□ -1.04
AC003001.1-201ENST00000443247 OXCT2Q9BYC2 517 aaPredicted RBP8.57□□□□□ -1.04
AC003001.1-201ENST00000443247 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.57□□□□□ -1.04
AC003001.1-201ENST00000443247 STRN4Q9NRL3 753 aa8.57□□□□□ -1.04
AC003001.1-201ENST00000443247 KLK14Q9P0G3 267 aa8.57□□□□□ -1.04
AC003001.1-201ENST00000443247 C2CD2LO14523 706 aa8.56□□□□□ -1.04
AC003001.1-201ENST00000443247 TYRO3Q06418 890 aa8.56□□□□□ -1.04
AC003001.1-201ENST00000443247 GPAT2Q6NUI2 795 aa8.56□□□□□ -1.04
AC003001.1-201ENST00000443247 CAPN12Q6ZSI9 719 aa8.56□□□□□ -1.04
AC003001.1-201ENST00000443247 SCARF2Q96GP6 870 aaPredicted RBP8.56□□□□□ -1.04
AC003001.1-201ENST00000443247 MYO19Q96H55 970 aa8.56□□□□□ -1.04
AC003001.1-201ENST00000443247 BTLAQ7Z6A9 289 aa8.55□□□□□ -1.04
AC003001.1-201ENST00000443247 BRD7Q9NPI1 651 aa8.55□□□□□ -1.04
AC003001.1-201ENST00000443247 MARK1Q9P0L2 795 aa8.55□□□□□ -1.04
AC003001.1-201ENST00000443247 GDF2Q9UK05 429 aaPredicted RBP8.55□□□□□ -1.04
AC003001.1-201ENST00000443247 BCS1LQ9Y276 419 aa8.55□□□□□ -1.04
AC003001.1-201ENST00000443247 TGFBR3LH3BV60 316 aa8.54□□□□□ -1.04
AC003001.1-201ENST00000443247 OIP5O43482 229 aa8.54□□□□□ -1.04
AC003001.1-201ENST00000443247 LAMC2Q13753 1193 aa8.54□□□□□ -1.04
AC003001.1-201ENST00000443247 LRFN2Q9ULH4 789 aa8.54□□□□□ -1.04
AC003001.1-201ENST00000443247 PTCD1O75127 700 aaKnown RBP8.53□□□□□ -1.04
AC003001.1-201ENST00000443247 SFSWAPQ12872 951 aaKnown RBP8.53□□□□□ -1.04
AC003001.1-201ENST00000443247 NAA30Q147X3 362 aaPredicted RBP8.53□□□□□ -1.04
AC003001.1-201ENST00000443247 COX20Q5RI15 118 aa8.53□□□□□ -1.04
AC003001.1-201ENST00000443247 FAM182BQ5T319 152 aa8.53□□□□□ -1.04
AC003001.1-201ENST00000443247 IER5Q5VY09 327 aa8.53□□□□□ -1.04
AC003001.1-201ENST00000443247 GOLGA6L1Q8N7Z2 621 aa8.53□□□□□ -1.04
AC003001.1-201ENST00000443247 NEDD1Q8NHV4 660 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms