RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 CCDC83Q8IWF9 413 aa16.93■□□□□ 0.3
MCF2L-218ENST00000442625 NALCNQ8IZF0 1738 aa16.93■□□□□ 0.3
MCF2L-218ENST00000442625 SRGAP3O43295 1099 aa16.93■□□□□ 0.3
MCF2L-218ENST00000442625 ANXA1P04083 346 aa16.93■□□□□ 0.3
MCF2L-218ENST00000442625 COL9A3Q14050 684 aaPredicted RBP16.93■□□□□ 0.3
MCF2L-218ENST00000442625 ATP2B3Q16720 1220 aa16.93■□□□□ 0.3
MCF2L-218ENST00000442625 TTC21AQ8NDW8 1320 aa16.92■□□□□ 0.3
MCF2L-218ENST00000442625 KDM4AO75164 1064 aa16.92■□□□□ 0.3
MCF2L-218ENST00000442625 FAM173BQ6P4H8 233 aa16.92■□□□□ 0.3
MCF2L-218ENST00000442625 RHPN1Q8TCX5 695 aa16.92■□□□□ 0.3
MCF2L-218ENST00000442625 SSH3Q8TE77 659 aa16.92■□□□□ 0.3
MCF2L-218ENST00000442625 KCNF1Q9H3M0 494 aa16.92■□□□□ 0.3
MCF2L-218ENST00000442625 HOXC9P31274 260 aa16.92■□□□□ 0.3
MCF2L-218ENST00000442625 TAF7Q15545 349 aaPredicted RBP16.92■□□□□ 0.3
MCF2L-218ENST00000442625 PI4K2BQ8TCG2 481 aa16.92■□□□□ 0.3
MCF2L-218ENST00000442625 TOPAZ1Q8N9V7 1692 aa16.92■□□□□ 0.3
MCF2L-218ENST00000442625 CASTP20810 708 aaKnown RBP16.91■□□□□ 0.3
MCF2L-218ENST00000442625 PPP4R3BQ5MIZ7 849 aa16.91■□□□□ 0.3
MCF2L-218ENST00000442625 SMC3Q9UQE7 1217 aa16.91■□□□□ 0.3
MCF2L-218ENST00000442625 F13A1P00488 732 aa16.9■□□□□ 0.3
MCF2L-218ENST00000442625 CAMK4Q16566 473 aa16.9■□□□□ 0.3
MCF2L-218ENST00000442625 ADCK5Q3MIX3 580 aa16.9■□□□□ 0.3
MCF2L-218ENST00000442625 SMAP1Q8IYB5 467 aaPredicted RBP16.9■□□□□ 0.3
MCF2L-218ENST00000442625 PLCD3Q8N3E9 789 aa16.9■□□□□ 0.3
MCF2L-218ENST00000442625 NECAB1Q8N987 351 aa16.9■□□□□ 0.3
MCF2L-218ENST00000442625 TTC14Q96N46 770 aa16.9■□□□□ 0.3
MCF2L-218ENST00000442625 BCL2L12Q9HB09 334 aa16.9■□□□□ 0.3
MCF2L-218ENST00000442625 VPS37CA5D8V6 355 aaPredicted RBP16.9■□□□□ 0.3
MCF2L-218ENST00000442625 IGSF3O75054 1194 aa16.9■□□□□ 0.3
MCF2L-218ENST00000442625 UBE2HP62256 183 aa16.9■□□□□ 0.3
MCF2L-218ENST00000442625 FERMT3Q86UX7 667 aa16.9■□□□□ 0.3
MCF2L-218ENST00000442625 CCDC9Q9Y3X0 531 aaKnown RBP16.9■□□□□ 0.3
MCF2L-218ENST00000442625 MAP3K5Q99683 1374 aa16.9■□□□□ 0.3
MCF2L-218ENST00000442625 XRN1Q8IZH2 1706 aaKnown RBP16.9■□□□□ 0.3
MCF2L-218ENST00000442625 SGSM2O43147 1006 aa16.9■□□□□ 0.3
MCF2L-218ENST00000442625 FAM184AQ8NB25 1140 aa16.9■□□□□ 0.3
MCF2L-218ENST00000442625 TUBGCP6Q96RT7 1819 aa16.89■□□□□ 0.29
MCF2L-218ENST00000442625 GJB2P29033 226 aa16.89■□□□□ 0.29
MCF2L-218ENST00000442625 UVSSAQ2YD98 709 aa16.89■□□□□ 0.29
MCF2L-218ENST00000442625 MTERF4Q7Z6M4 381 aaKnown RBP16.89■□□□□ 0.29
MCF2L-218ENST00000442625 LSG1Q9H089 658 aaKnown RBP16.89■□□□□ 0.29
MCF2L-218ENST00000442625 RAD50Q92878 1312 aa16.89■□□□□ 0.29
MCF2L-218ENST00000442625 HTATSF1O43719 755 aaKnown RBP16.89■□□□□ 0.29
MCF2L-218ENST00000442625 PTH1RQ03431 593 aa16.89■□□□□ 0.29
MCF2L-218ENST00000442625 CHPF2Q9P2E5 772 aa16.89■□□□□ 0.29
MCF2L-218ENST00000442625 KCNG1Q9UIX4 513 aa16.89■□□□□ 0.29
MCF2L-218ENST00000442625 FAM208AQ9UK61 1670 aaKnown RBP16.89■□□□□ 0.29
MCF2L-218ENST00000442625 KCNQ3O43525 872 aa16.88■□□□□ 0.29
MCF2L-218ENST00000442625 LIMCH1Q9UPQ0 1083 aa16.88■□□□□ 0.29
MCF2L-218ENST00000442625 KIF3AQ9Y496 699 aa16.88■□□□□ 0.29
MCF2L-218ENST00000442625 FMN2Q9NZ56 1722 aa16.88■□□□□ 0.29
MCF2L-218ENST00000442625 PLEKHG1Q9ULL1 1385 aa16.88■□□□□ 0.29
MCF2L-218ENST00000442625 RIOK3O14730 519 aaKnown RBP16.88■□□□□ 0.29
MCF2L-218ENST00000442625 ZSCAN20P17040 1043 aaPredicted RBP16.88■□□□□ 0.29
MCF2L-218ENST00000442625 ABTB2Q8N961 1025 aa16.88■□□□□ 0.29
MCF2L-218ENST00000442625 TMEM87AQ8NBN3 555 aa16.88■□□□□ 0.29
MCF2L-218ENST00000442625 FUCA2Q9BTY2 467 aa16.88■□□□□ 0.29
MCF2L-218ENST00000442625 LGR6Q9HBX8 967 aa16.88■□□□□ 0.29
MCF2L-218ENST00000442625 PI4KAP2A4QPH2 592 aa16.87■□□□□ 0.29
MCF2L-218ENST00000442625 POLA2Q14181 598 aa16.87■□□□□ 0.29
MCF2L-218ENST00000442625 PI4KAP1Q8N8J0 262 aa16.87■□□□□ 0.29
MCF2L-218ENST00000442625 PRIMPOLQ96LW4 560 aa16.87■□□□□ 0.29
MCF2L-218ENST00000442625 TCEANC2Q96MN5 208 aa16.87■□□□□ 0.29
MCF2L-218ENST00000442625 UBR1Q8IWV7 1749 aa16.87■□□□□ 0.29
MCF2L-218ENST00000442625 OS9Q13438 667 aaPredicted RBP16.87■□□□□ 0.29
MCF2L-218ENST00000442625 PRPF40BQ6NWY9 871 aaKnown RBP16.87■□□□□ 0.29
MCF2L-218ENST00000442625 AOX1Q06278 1338 aa16.87■□□□□ 0.29
MCF2L-218ENST00000442625 RAB11FIP3O75154 756 aa16.86■□□□□ 0.29
MCF2L-218ENST00000442625 CNTROBQ8N137 903 aa16.86■□□□□ 0.29
MCF2L-218ENST00000442625 KIF1BPQ96EK5 621 aa16.86■□□□□ 0.29
MCF2L-218ENST00000442625 JAKMIP1Q96N16 626 aaKnown RBP16.86■□□□□ 0.29
MCF2L-218ENST00000442625 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.86■□□□□ 0.29
MCF2L-218ENST00000442625 HMGN5P82970 282 aaKnown RBP16.86■□□□□ 0.29
MCF2L-218ENST00000442625 ST3GAL1Q11201 340 aa16.86■□□□□ 0.29
MCF2L-218ENST00000442625 IL17RAQ96F46 866 aa16.86■□□□□ 0.29
MCF2L-218ENST00000442625 SPTLC3Q9NUV7 552 aa16.86■□□□□ 0.29
MCF2L-218ENST00000442625 MTMR6Q9Y217 621 aa16.86■□□□□ 0.29
MCF2L-218ENST00000442625 PTGS1P23219 599 aa16.85■□□□□ 0.29
MCF2L-218ENST00000442625 LUZP1Q86V48 1076 aa16.85■□□□□ 0.29
MCF2L-218ENST00000442625 CKAP2LQ8IYA6 745 aa16.85■□□□□ 0.29
MCF2L-218ENST00000442625 KIAA1524Q8TCG1 905 aa16.85■□□□□ 0.29
MCF2L-218ENST00000442625 HYPKQ9NX55 129 aa16.85■□□□□ 0.29
MCF2L-218ENST00000442625 EID1Q9Y6B2 187 aa16.85■□□□□ 0.29
MCF2L-218ENST00000442625 U2AF2P26368 475 aaKnown RBP eCLIP16.84■□□□□ 0.29
MCF2L-218ENST00000442625 LRMPQ12912 555 aa16.84■□□□□ 0.29
MCF2L-218ENST00000442625 TMEM132AQ24JP5 1023 aa16.84■□□□□ 0.29
MCF2L-218ENST00000442625 LIG1P18858 919 aa16.84■□□□□ 0.29
MCF2L-218ENST00000442625 BEND3Q5T5X7 828 aa16.84■□□□□ 0.29
MCF2L-218ENST00000442625 NRBP1Q9UHY1 535 aa16.84■□□□□ 0.29
MCF2L-218ENST00000442625 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-218ENST00000442625 PIK3C2AO00443 1686 aa16.84■□□□□ 0.29
MCF2L-218ENST00000442625 RGPD8O14715 1765 aaPredicted RBP16.83■□□□□ 0.29
MCF2L-218ENST00000442625 DNAAF4Q8WXU2 420 aa16.83■□□□□ 0.29
MCF2L-218ENST00000442625 PA2G4Q9UQ80 394 aaKnown RBP16.83■□□□□ 0.29
MCF2L-218ENST00000442625 GTF2F1P35269 517 aaKnown RBP eCLIP16.83■□□□□ 0.28
MCF2L-218ENST00000442625 NAA30Q147X3 362 aaPredicted RBP16.83■□□□□ 0.28
MCF2L-218ENST00000442625 ME3Q16798 604 aa16.83■□□□□ 0.28
MCF2L-218ENST00000442625 DIAPH3Q9NSV4 1193 aa16.83■□□□□ 0.28
MCF2L-218ENST00000442625 PDRG1Q9NUG6 133 aa16.83■□□□□ 0.28
MCF2L-218ENST00000442625 EIF4A1P60842 406 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms