RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 MYH16Q9H6N6 1097 aa19.44■□□□□ 0.7
CSNK1E-210ENST00000442216 MAP3K15Q6ZN16 1313 aa19.44■□□□□ 0.7
CSNK1E-210ENST00000442216 FANCIQ9NVI1 1328 aa19.44■□□□□ 0.7
CSNK1E-210ENST00000442216 CARMIL3Q8ND23 1372 aa19.44■□□□□ 0.7
CSNK1E-210ENST00000442216 KIAA1551Q9HCM1 1747 aa19.43■□□□□ 0.7
CSNK1E-210ENST00000442216 GOLGA2Q08379 1002 aa19.43■□□□□ 0.7
CSNK1E-210ENST00000442216 NECTIN2Q92692 538 aa19.43■□□□□ 0.7
CSNK1E-210ENST00000442216 CHPF2Q9P2E5 772 aa19.43■□□□□ 0.7
CSNK1E-210ENST00000442216 ANKRD36CQ5JPF3 1778 aa19.42■□□□□ 0.7
CSNK1E-210ENST00000442216 SERPINB2P05120 415 aa19.42■□□□□ 0.7
CSNK1E-210ENST00000442216 PROSER3Q2NL68 480 aa19.42■□□□□ 0.7
CSNK1E-210ENST00000442216 TTLL7Q6ZT98 887 aa19.42■□□□□ 0.7
CSNK1E-210ENST00000442216 SETDB2Q96T68 719 aa19.42■□□□□ 0.7
CSNK1E-210ENST00000442216 HYPKQ9NX55 129 aa19.42■□□□□ 0.7
CSNK1E-210ENST00000442216 ELL2O00472 640 aaPredicted RBP19.41■□□□□ 0.7
CSNK1E-210ENST00000442216 TGFB2P61812 414 aa19.41■□□□□ 0.7
CSNK1E-210ENST00000442216 TWISTNBQ3B726 338 aaPredicted RBP19.41■□□□□ 0.7
CSNK1E-210ENST00000442216 CCDC30Q5VVM6 783 aa19.41■□□□□ 0.7
CSNK1E-210ENST00000442216 TSPYL6Q8N831 410 aa19.41■□□□□ 0.7
CSNK1E-210ENST00000442216 N4BP2Q86UW6 1770 aaPredicted RBP19.41■□□□□ 0.7
CSNK1E-210ENST00000442216 BRCA1P38398 1863 aaKnown RBP19.4■□□□□ 0.7
CSNK1E-210ENST00000442216 DCAF8L1A6NGE4 600 aa19.4■□□□□ 0.7
CSNK1E-210ENST00000442216 ANXA1P04083 346 aa19.4■□□□□ 0.7
CSNK1E-210ENST00000442216 HLFQ16534 295 aa19.4■□□□□ 0.7
CSNK1E-210ENST00000442216 GIGYF2Q6Y7W6 1299 aaKnown RBP19.4■□□□□ 0.7
CSNK1E-210ENST00000442216 BICDL1Q6ZP65 573 aa19.4■□□□□ 0.7
CSNK1E-210ENST00000442216 NLGN2Q8NFZ4 835 aa19.4■□□□□ 0.7
CSNK1E-210ENST00000442216 SPINK5Q9NQ38 1064 aaPredicted RBP19.4■□□□□ 0.7
CSNK1E-210ENST00000442216 ATP10DQ9P241 1426 aa19.4■□□□□ 0.7
CSNK1E-210ENST00000442216 COPS6Q7L5N1 327 aa19.39■□□□□ 0.69
CSNK1E-210ENST00000442216 E9PSI1 815 aa19.38■□□□□ 0.69
CSNK1E-210ENST00000442216 ANKRD31Q8N7Z5 1873 aa19.38■□□□□ 0.69
CSNK1E-210ENST00000442216 XAGE3Q8WTP9 111 aa19.38■□□□□ 0.69
CSNK1E-210ENST00000442216 NIP7Q9Y221 180 aaKnown RBP eCLIP19.38■□□□□ 0.69
CSNK1E-210ENST00000442216 DLEC1Q9Y238 1755 aa19.37■□□□□ 0.69
CSNK1E-210ENST00000442216 PXDNLA1KZ92 1463 aa19.37■□□□□ 0.69
CSNK1E-210ENST00000442216 EXOSC9Q06265 439 aaKnown RBP19.37■□□□□ 0.69
CSNK1E-210ENST00000442216 ZBTB3Q9H5J0 574 aa19.37■□□□□ 0.69
CSNK1E-210ENST00000442216 ARFGEF2Q9Y6D5 1785 aa19.37■□□□□ 0.69
CSNK1E-210ENST00000442216 VAMP4O75379 141 aa19.36■□□□□ 0.69
CSNK1E-210ENST00000442216 AIMP1Q12904 312 aaKnown RBP19.36■□□□□ 0.69
CSNK1E-210ENST00000442216 HSP90AB3PQ58FF7 597 aa19.36■□□□□ 0.69
CSNK1E-210ENST00000442216 STK31Q9BXU1 1019 aa19.36■□□□□ 0.69
CSNK1E-210ENST00000442216 IBTKQ9P2D0 1353 aaPredicted RBP19.35■□□□□ 0.69
CSNK1E-210ENST00000442216 SLFN5Q08AF3 891 aa19.35■□□□□ 0.69
CSNK1E-210ENST00000442216 PRR5LQ6MZQ0 368 aa19.35■□□□□ 0.69
CSNK1E-210ENST00000442216 TPTE2Q6XPS3 522 aa19.35■□□□□ 0.69
CSNK1E-210ENST00000442216 ANKRD13DQ6ZTN6 518 aa19.35■□□□□ 0.69
CSNK1E-210ENST00000442216 ZNF34Q8IZ26 560 aa19.35■□□□□ 0.69
CSNK1E-210ENST00000442216 CNBD1Q8NA66 436 aa19.35■□□□□ 0.69
CSNK1E-210ENST00000442216 PLBD2Q8NHP8 589 aa19.35■□□□□ 0.69
CSNK1E-210ENST00000442216 PDZRN3Q9UPQ7 1066 aa19.35■□□□□ 0.69
CSNK1E-210ENST00000442216 NBPF5PQ86XG9 351 aaPredicted RBP19.34■□□□□ 0.69
CSNK1E-210ENST00000442216 CHD4Q14839 1912 aa19.33■□□□□ 0.69
CSNK1E-210ENST00000442216 ARFGEF1Q9Y6D6 1849 aa19.33■□□□□ 0.69
CSNK1E-210ENST00000442216 ST5P78524 1137 aa19.33■□□□□ 0.68
CSNK1E-210ENST00000442216 PARP10Q53GL7 1025 aa19.33■□□□□ 0.68
CSNK1E-210ENST00000442216 BRIP1Q9BX63 1249 aa19.33■□□□□ 0.68
CSNK1E-210ENST00000442216 NYXQ9GZU5 481 aa19.33■□□□□ 0.68
CSNK1E-210ENST00000442216 NPHP1O15259 732 aa19.32■□□□□ 0.68
CSNK1E-210ENST00000442216 TCIRG1Q13488 830 aa19.32■□□□□ 0.68
CSNK1E-210ENST00000442216 TRMT2AQ8IZ69 625 aaKnown RBP19.32■□□□□ 0.68
CSNK1E-210ENST00000442216 PHAXQ9H814 394 aaKnown RBP19.32■□□□□ 0.68
CSNK1E-210ENST00000442216 DDX58O95786 925 aaKnown RBP19.31■□□□□ 0.68
CSNK1E-210ENST00000442216 DPEP1P16444 411 aa19.31■□□□□ 0.68
CSNK1E-210ENST00000442216 PDE6BP35913 854 aa19.31■□□□□ 0.68
CSNK1E-210ENST00000442216 GPR162Q16538 588 aa19.31■□□□□ 0.68
CSNK1E-210ENST00000442216 PPP1R42Q7Z4L9 355 aa19.31■□□□□ 0.68
CSNK1E-210ENST00000442216 UBN2Q6ZU65 1347 aa19.3■□□□□ 0.68
CSNK1E-210ENST00000442216 A0A0G2JLW4 131 aa19.3■□□□□ 0.68
CSNK1E-210ENST00000442216 KCNA3P22001 575 aa19.3■□□□□ 0.68
CSNK1E-210ENST00000442216 RNF123Q5XPI4 1314 aa19.29■□□□□ 0.68
CSNK1E-210ENST00000442216 RIC1Q4ADV7 1423 aa19.29■□□□□ 0.68
CSNK1E-210ENST00000442216 GRIN3BO60391 1043 aa19.29■□□□□ 0.68
CSNK1E-210ENST00000442216 SLC4A2P04920 1241 aa19.29■□□□□ 0.68
CSNK1E-210ENST00000442216 GPTP24298 496 aa19.29■□□□□ 0.68
CSNK1E-210ENST00000442216 RIC3Q7Z5B4 369 aa19.29■□□□□ 0.68
CSNK1E-210ENST00000442216 PIM2Q9P1W9 311 aa19.29■□□□□ 0.68
CSNK1E-210ENST00000442216 COL11A2P13942 1736 aaPredicted RBP19.28■□□□□ 0.68
CSNK1E-210ENST00000442216 H0YIN7 160 aa19.28■□□□□ 0.68
CSNK1E-210ENST00000442216 GTF2E1P29083 439 aaPredicted RBP19.28■□□□□ 0.68
CSNK1E-210ENST00000442216 SUSD4Q5VX71 490 aa19.28■□□□□ 0.68
CSNK1E-210ENST00000442216 ZNF428Q96B54 188 aa19.28■□□□□ 0.68
CSNK1E-210ENST00000442216 CDCA7LQ96GN5 454 aa19.28■□□□□ 0.68
CSNK1E-210ENST00000442216 KLRG2A4D1S0 409 aaPredicted RBP19.27■□□□□ 0.68
CSNK1E-210ENST00000442216 NTSR2O95665 410 aa19.27■□□□□ 0.68
CSNK1E-210ENST00000442216 CT47B1P0C2W7 299 aaPredicted RBP19.27■□□□□ 0.68
CSNK1E-210ENST00000442216 YBX3P16989 372 aaKnown RBP eCLIP19.27■□□□□ 0.683e-7■□□□□ 10.1
CSNK1E-210ENST00000442216 HNRNPUQ00839 825 aaKnown RBP eCLIP19.27■□□□□ 0.68
CSNK1E-210ENST00000442216 TRIM28Q13263 835 aaKnown RBP19.27■□□□□ 0.68
CSNK1E-210ENST00000442216 ISCA1Q9BUE6 129 aa19.27■□□□□ 0.68
CSNK1E-210ENST00000442216 CHRNA5P30532 468 aa19.26■□□□□ 0.67
CSNK1E-210ENST00000442216 KSR2Q6VAB6 950 aa19.26■□□□□ 0.67
CSNK1E-210ENST00000442216 NLRP10Q86W26 655 aa19.26■□□□□ 0.67
CSNK1E-210ENST00000442216 C2CD5Q86YS7 1000 aa19.26■□□□□ 0.67
CSNK1E-210ENST00000442216 PELP1Q8IZL8 1130 aaKnown RBP19.26■□□□□ 0.67
CSNK1E-210ENST00000442216 UTP14AQ9BVJ6 771 aaKnown RBP19.26■□□□□ 0.67
CSNK1E-210ENST00000442216 FAM177BA6PVY3 158 aa19.25■□□□□ 0.67
CSNK1E-210ENST00000442216 TCERG1O14776 1098 aaKnown RBP19.25■□□□□ 0.67
CSNK1E-210ENST00000442216 FLIIQ13045 1269 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms