RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 PDZRN3Q9UPQ7 1066 aa22.21■■□□□ 1.15
COL16A1-204ENST00000440437 DICER1Q9UPY3 1922 aaKnown RBP22.21■■□□□ 1.15
COL16A1-204ENST00000440437 SLX4Q8IY92 1834 aa22.2■■□□□ 1.14
COL16A1-204ENST00000440437 ZNF652Q9Y2D9 606 aa22.2■■□□□ 1.14
COL16A1-204ENST00000440437 ST5P78524 1137 aa22.18■■□□□ 1.14
COL16A1-204ENST00000440437 PRELPP51888 382 aa22.17■■□□□ 1.14
COL16A1-204ENST00000440437 NMRK2Q9NPI5 230 aa22.17■■□□□ 1.14
COL16A1-204ENST00000440437 NFKBIEO00221 500 aa22.16■■□□□ 1.14
COL16A1-204ENST00000440437 TMPOP42166 694 aaKnown RBP22.16■■□□□ 1.14
COL16A1-204ENST00000440437 RIPK4P57078 832 aa22.16■■□□□ 1.14
COL16A1-204ENST00000440437 ZNF622Q969S3 477 aaKnown RBP eCLIP22.16■■□□□ 1.14
COL16A1-204ENST00000440437 ZC3H4Q9UPT8 1303 aaKnown RBP22.15■■□□□ 1.14
COL16A1-204ENST00000440437 NPHP1O15259 732 aa22.15■■□□□ 1.14
COL16A1-204ENST00000440437 HLFQ16534 295 aa22.15■■□□□ 1.14
COL16A1-204ENST00000440437 NBPF5PQ86XG9 351 aaPredicted RBP22.15■■□□□ 1.14
COL16A1-204ENST00000440437 CEP350Q5VT06 3117 aa22.15■■□□□ 1.14
COL16A1-204ENST00000440437 SRGNP10124 158 aa22.14■■□□□ 1.13
COL16A1-204ENST00000440437 HSPA6P17066 643 aa22.14■■□□□ 1.13
COL16A1-204ENST00000440437 LMNB1P20700 586 aa22.14■■□□□ 1.13
COL16A1-204ENST00000440437 TSPYL4Q9UJ04 414 aa22.14■■□□□ 1.13
COL16A1-204ENST00000440437 NIP7Q9Y221 180 aaKnown RBP eCLIP22.14■■□□□ 1.13
COL16A1-204ENST00000440437 STYK1Q6J9G0 422 aa22.13■■□□□ 1.13
COL16A1-204ENST00000440437 ERBB4Q15303 1308 aa22.12■■□□□ 1.13
COL16A1-204ENST00000440437 KDM2BQ8NHM5 1336 aa22.12■■□□□ 1.13
COL16A1-204ENST00000440437 TOMM70O94826 608 aa22.12■■□□□ 1.13
COL16A1-204ENST00000440437 LMOD3Q0VAK6 560 aa22.12■■□□□ 1.13
COL16A1-204ENST00000440437 MASTLQ96GX5 879 aa22.12■■□□□ 1.13
COL16A1-204ENST00000440437 BABAM1Q9NWV8 329 aa22.12■■□□□ 1.13
COL16A1-204ENST00000440437 MAP3K15Q6ZN16 1313 aa22.11■■□□□ 1.13
COL16A1-204ENST00000440437 KLRG2A4D1S0 409 aaPredicted RBP22.11■■□□□ 1.13
COL16A1-204ENST00000440437 ERVV-1B6SEH8 477 aa22.11■■□□□ 1.13
COL16A1-204ENST00000440437 C21orf2O43822 256 aa22.11■■□□□ 1.13
COL16A1-204ENST00000440437 TTLL7Q6ZT98 887 aa22.11■■□□□ 1.13
COL16A1-204ENST00000440437 CCDC146Q8IYE0 955 aa22.11■■□□□ 1.13
COL16A1-204ENST00000440437 CNKSR1Q969H4 720 aa22.11■■□□□ 1.13
COL16A1-204ENST00000440437 PRKRIP1Q9H875 184 aaPredicted RBP22.11■■□□□ 1.13
COL16A1-204ENST00000440437 RRP7AQ9Y3A4 280 aaKnown RBP22.11■■□□□ 1.13
COL16A1-204ENST00000440437 ANKRD36CQ5JPF3 1778 aa22.11■■□□□ 1.13
COL16A1-204ENST00000440437 PRPF40BQ6NWY9 871 aaKnown RBP22.1■■□□□ 1.13
COL16A1-204ENST00000440437 TPTE2Q6XPS3 522 aa22.1■■□□□ 1.13
COL16A1-204ENST00000440437 NGEFQ8N5V2 710 aa22.1■■□□□ 1.13
COL16A1-204ENST00000440437 LTBP3Q9NS15 1303 aa22.09■■□□□ 1.13
COL16A1-204ENST00000440437 MYL6BP14649 208 aa22.09■■□□□ 1.13
COL16A1-204ENST00000440437 RUNDC1Q96C34 613 aa22.09■■□□□ 1.13
COL16A1-204ENST00000440437 ZNF219Q9P2Y4 722 aaPredicted RBP22.09■■□□□ 1.13
COL16A1-204ENST00000440437 WDR43Q15061 677 aaKnown RBP eCLIP22.08■■□□□ 1.13
COL16A1-204ENST00000440437 LRP10Q7Z4F1 713 aa22.08■■□□□ 1.13
COL16A1-204ENST00000440437 IBTKQ9P2D0 1353 aaPredicted RBP22.08■■□□□ 1.12
COL16A1-204ENST00000440437 WDR90Q96KV7 1748 aa22.08■■□□□ 1.12
COL16A1-204ENST00000440437 RIC1Q4ADV7 1423 aa22.07■■□□□ 1.12
COL16A1-204ENST00000440437 FAM177BA6PVY3 158 aa22.07■■□□□ 1.12
COL16A1-204ENST00000440437 KIF6Q6ZMV9 814 aa22.07■■□□□ 1.12
COL16A1-204ENST00000440437 ADAMTS8Q9UP79 889 aa22.07■■□□□ 1.12
COL16A1-204ENST00000440437 TRIM35Q9UPQ4 493 aa22.07■■□□□ 1.12
COL16A1-204ENST00000440437 ABCC12Q96J65 1359 aa22.07■■□□□ 1.12
COL16A1-204ENST00000440437 UBN2Q6ZU65 1347 aa22.06■■□□□ 1.12
COL16A1-204ENST00000440437 NPR1P16066 1061 aa22.06■■□□□ 1.12
COL16A1-204ENST00000440437 PDIA6Q15084 440 aa22.06■■□□□ 1.12
COL16A1-204ENST00000440437 NEUROD2Q15784 382 aa22.06■■□□□ 1.12
COL16A1-204ENST00000440437 RBM46Q8TBY0 533 aaKnown RBP22.06■■□□□ 1.12
COL16A1-204ENST00000440437 GLTPD2A6NH11 291 aa22.05■■□□□ 1.12
COL16A1-204ENST00000440437 C7orf43Q8WVR3 580 aa22.05■■□□□ 1.12
COL16A1-204ENST00000440437 ZBTB3Q9H5J0 574 aa22.05■■□□□ 1.12
COL16A1-204ENST00000440437 RRAGCQ9HB90 399 aa22.05■■□□□ 1.12
COL16A1-204ENST00000440437 SOGA3Q5TF21 947 aa22.04■■□□□ 1.12
COL16A1-204ENST00000440437 NYXQ9GZU5 481 aa22.04■■□□□ 1.12
COL16A1-204ENST00000440437 TAOK3Q9H2K8 898 aa22.04■■□□□ 1.12
COL16A1-204ENST00000440437 CHL1O00533 1208 aa22.03■■□□□ 1.12
COL16A1-204ENST00000440437 EIF2S2P20042 333 aaKnown RBP22.03■■□□□ 1.12
COL16A1-204ENST00000440437 GIGYF2Q6Y7W6 1299 aaKnown RBP22.03■■□□□ 1.12
COL16A1-204ENST00000440437 C16orf71Q8IYS4 520 aaPredicted RBP22.03■■□□□ 1.12
COL16A1-204ENST00000440437 PROSER3Q2NL68 480 aa22.02■■□□□ 1.12
COL16A1-204ENST00000440437 CRY2Q49AN0 593 aa22.02■■□□□ 1.12
COL16A1-204ENST00000440437 NUTM1Q86Y26 1132 aa22.02■■□□□ 1.12
COL16A1-204ENST00000440437 ZNF34Q8IZ26 560 aa22.02■■□□□ 1.12
COL16A1-204ENST00000440437 LAMB2P55268 1798 aa22.02■■□□□ 1.11
COL16A1-204ENST00000440437 SNED1Q8TER0 1413 aa22.01■■□□□ 1.11
COL16A1-204ENST00000440437 GPTP24298 496 aa22.01■■□□□ 1.11
COL16A1-204ENST00000440437 GTF2E1P29083 439 aaPredicted RBP22.01■■□□□ 1.11
COL16A1-204ENST00000440437 NTSR2O95665 410 aa22■■□□□ 1.11
COL16A1-204ENST00000440437 ANXA1P04083 346 aa22■■□□□ 1.11
COL16A1-204ENST00000440437 KRT24Q2M2I5 525 aa22■■□□□ 1.11
COL16A1-204ENST00000440437 ERFEQ4G0M1 354 aa22■■□□□ 1.11
COL16A1-204ENST00000440437 CCDC93Q567U6 631 aa22■■□□□ 1.11
COL16A1-204ENST00000440437 SUSD4Q5VX71 490 aa22■■□□□ 1.11
COL16A1-204ENST00000440437 APLP1P51693 650 aa21.99■■□□□ 1.11
COL16A1-204ENST00000440437 FSTL1Q12841 308 aa21.99■■□□□ 1.11
COL16A1-204ENST00000440437 ALDH1B1P30837 517 aa21.98■■□□□ 1.11
COL16A1-204ENST00000440437 POTECB2RU33 542 aa21.97■■□□□ 1.11
COL16A1-204ENST00000440437 VEGFAP15692 232 aaPredicted RBP21.97■■□□□ 1.11
COL16A1-204ENST00000440437 PARP10Q53GL7 1025 aa21.97■■□□□ 1.11
COL16A1-204ENST00000440437 OLFM4Q6UX06 510 aa21.97■■□□□ 1.11
COL16A1-204ENST00000440437 NECTIN2Q92692 538 aa21.97■■□□□ 1.11
COL16A1-204ENST00000440437 FKBP4Q02790 459 aaKnown RBP eCLIP21.96■■□□□ 1.11
COL16A1-204ENST00000440437 DPY19L2Q6NUT2 758 aa21.96■■□□□ 1.11
COL16A1-204ENST00000440437 DDX21Q9NR30 783 aaKnown RBP eCLIP21.96■■□□□ 1.11
COL16A1-204ENST00000440437 LAS1LQ9Y4W2 734 aaKnown RBP21.96■■□□□ 1.11
COL16A1-204ENST00000440437 SCN4AP35499 1836 aa21.95■■□□□ 1.1
COL16A1-204ENST00000440437 HOXB7P09629 217 aa21.95■■□□□ 1.1
COL16A1-204ENST00000440437 COPS6Q7L5N1 327 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms