RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 C1QTNF8P60827 252 aa26.01■■□□□ 1.75
SHROOM1-204ENST00000440118 KIF6Q6ZMV9 814 aa26.01■■□□□ 1.75
SHROOM1-204ENST00000440118 TTLL6Q8N841 843 aa26.01■■□□□ 1.75
SHROOM1-204ENST00000440118 ZNF622Q969S3 477 aaKnown RBP eCLIP26.01■■□□□ 1.75
SHROOM1-204ENST00000440118 BRIP1Q9BX63 1249 aa26.01■■□□□ 1.75
SHROOM1-204ENST00000440118 ADAMTS8Q9UP79 889 aa26.01■■□□□ 1.75
SHROOM1-204ENST00000440118 PDZRN3Q9UPQ7 1066 aa26.01■■□□□ 1.75
SHROOM1-204ENST00000440118 MYL6BP14649 208 aa26■■□□□ 1.75
SHROOM1-204ENST00000440118 NIP7Q9Y221 180 aaKnown RBP eCLIP26■■□□□ 1.75
SHROOM1-204ENST00000440118 NUP98P52948 1817 aa26■■□□□ 1.75
SHROOM1-204ENST00000440118 LAS1LQ9Y4W2 734 aaKnown RBP25.99■■□□□ 1.75
SHROOM1-204ENST00000440118 C9orf131Q5VYM1 1079 aa25.98■■□□□ 1.75
SHROOM1-204ENST00000440118 BABAM1Q9NWV8 329 aa25.98■■□□□ 1.75
SHROOM1-204ENST00000440118 SBF1O95248 1867 aa25.98■■□□□ 1.75
SHROOM1-204ENST00000440118 FAM177BA6PVY3 158 aa25.96■■□□□ 1.75
SHROOM1-204ENST00000440118 RGL2O15211 777 aa25.96■■□□□ 1.75
SHROOM1-204ENST00000440118 EIF2S2P20042 333 aaKnown RBP25.96■■□□□ 1.75
SHROOM1-204ENST00000440118 RNF181Q9P0P0 153 aa25.96■■□□□ 1.75
SHROOM1-204ENST00000440118 ERBB4Q15303 1308 aa25.95■■□□□ 1.75
SHROOM1-204ENST00000440118 GTF2E1P29083 439 aaPredicted RBP25.95■■□□□ 1.74
SHROOM1-204ENST00000440118 CCDC88AQ3V6T2 1871 aa25.94■■□□□ 1.74
SHROOM1-204ENST00000440118 SENP3-EIF4A1A0A087X0R7 540 aa25.94■■□□□ 1.74
SHROOM1-204ENST00000440118 TPTE2Q6XPS3 522 aa25.94■■□□□ 1.74
SHROOM1-204ENST00000440118 MAP3K15Q6ZN16 1313 aa25.93■■□□□ 1.74
SHROOM1-204ENST00000440118 ARFGEF2Q9Y6D5 1785 aa25.93■■□□□ 1.74
SHROOM1-204ENST00000440118 HLFQ16534 295 aa25.93■■□□□ 1.74
SHROOM1-204ENST00000440118 ZNF219Q9P2Y4 722 aaPredicted RBP25.93■■□□□ 1.74
SHROOM1-204ENST00000440118 RASSF7Q02833 373 aa25.92■■□□□ 1.74
SHROOM1-204ENST00000440118 ZBTB3Q9H5J0 574 aa25.92■■□□□ 1.74
SHROOM1-204ENST00000440118 ERVV-1B6SEH8 477 aa25.91■■□□□ 1.74
SHROOM1-204ENST00000440118 TRIM35Q9UPQ4 493 aa25.91■■□□□ 1.74
SHROOM1-204ENST00000440118 TIAM2Q8IVF5 1701 aa25.91■■□□□ 1.74
SHROOM1-204ENST00000440118 ZNF316A6NFI3 1004 aaPredicted RBP25.9■■□□□ 1.74
SHROOM1-204ENST00000440118 TTLL7Q6ZT98 887 aa25.9■■□□□ 1.74
SHROOM1-204ENST00000440118 CNKSR1Q969H4 720 aa25.9■■□□□ 1.74
SHROOM1-204ENST00000440118 STYK1Q6J9G0 422 aa25.89■■□□□ 1.74
SHROOM1-204ENST00000440118 NECTIN2Q92692 538 aa25.89■■□□□ 1.74
SHROOM1-204ENST00000440118 MASTLQ96GX5 879 aa25.89■■□□□ 1.74
SHROOM1-204ENST00000440118 NYXQ9GZU5 481 aa25.89■■□□□ 1.74
SHROOM1-204ENST00000440118 SLX4Q8IY92 1834 aa25.88■■□□□ 1.73
SHROOM1-204ENST00000440118 C21orf2O43822 256 aa25.87■■□□□ 1.73
SHROOM1-204ENST00000440118 SRGNP10124 158 aa25.87■■□□□ 1.73
SHROOM1-204ENST00000440118 GPTP24298 496 aa25.87■■□□□ 1.73
SHROOM1-204ENST00000440118 KDM2BQ8NHM5 1336 aa25.87■■□□□ 1.73
SHROOM1-204ENST00000440118 FER1L6Q2WGJ9 1857 aa25.86■■□□□ 1.73
SHROOM1-204ENST00000440118 CHL1O00533 1208 aa25.86■■□□□ 1.73
SHROOM1-204ENST00000440118 APAF1O14727 1248 aa25.86■■□□□ 1.73
SHROOM1-204ENST00000440118 LMNB1P20700 586 aa25.86■■□□□ 1.73
SHROOM1-204ENST00000440118 PRPF40BQ6NWY9 871 aaKnown RBP25.86■■□□□ 1.73
SHROOM1-204ENST00000440118 ANKRD36CQ5JPF3 1778 aa25.86■■□□□ 1.73
SHROOM1-204ENST00000440118 TNRC6CQ9HCJ0 1690 aaKnown RBP25.85■■□□□ 1.73
SHROOM1-204ENST00000440118 ANP32CO43423 234 aa25.85■■□□□ 1.73
SHROOM1-204ENST00000440118 ANXA1P04083 346 aa25.85■■□□□ 1.73
SHROOM1-204ENST00000440118 CALD1Q05682 793 aaKnown RBP25.85■■□□□ 1.73
SHROOM1-204ENST00000440118 NPR1P16066 1061 aa25.84■■□□□ 1.73
SHROOM1-204ENST00000440118 SOGA3Q5TF21 947 aa25.84■■□□□ 1.73
SHROOM1-204ENST00000440118 KRT24Q2M2I5 525 aa25.83■■□□□ 1.73
SHROOM1-204ENST00000440118 PROSER3Q2NL68 480 aa25.83■■□□□ 1.73
SHROOM1-204ENST00000440118 NUTM1Q86Y26 1132 aa25.83■■□□□ 1.73
SHROOM1-204ENST00000440118 CFAP44Q96MT7 982 aa25.83■■□□□ 1.73
SHROOM1-204ENST00000440118 DICER1Q9UPY3 1922 aaKnown RBP25.82■■□□□ 1.72
SHROOM1-204ENST00000440118 AIMP1Q12904 312 aaKnown RBP25.82■■□□□ 1.72
SHROOM1-204ENST00000440118 HDGFL1Q5TGJ6 251 aa25.82■■□□□ 1.72
SHROOM1-204ENST00000440118 GIGYF2Q6Y7W6 1299 aaKnown RBP25.82■■□□□ 1.72
SHROOM1-204ENST00000440118 C16orf71Q8IYS4 520 aaPredicted RBP25.82■■□□□ 1.72
SHROOM1-204ENST00000440118 NMRK2Q9NPI5 230 aa25.82■■□□□ 1.72
SHROOM1-204ENST00000440118 ZC3H4Q9UPT8 1303 aaKnown RBP25.82■■□□□ 1.72
SHROOM1-204ENST00000440118 IBTKQ9P2D0 1353 aaPredicted RBP25.82■■□□□ 1.72
SHROOM1-204ENST00000440118 NFKBIEO00221 500 aa25.81■■□□□ 1.72
SHROOM1-204ENST00000440118 KIF3CO14782 793 aa25.81■■□□□ 1.72
SHROOM1-204ENST00000440118 PDIA6Q15084 440 aa25.81■■□□□ 1.72
SHROOM1-204ENST00000440118 TAOK3Q9H2K8 898 aa25.81■■□□□ 1.72
SHROOM1-204ENST00000440118 ABCC12Q96J65 1359 aa25.81■■□□□ 1.72
SHROOM1-204ENST00000440118 PPP1R42Q7Z4L9 355 aa25.8■■□□□ 1.72
SHROOM1-204ENST00000440118 UBN2Q6ZU65 1347 aa25.8■■□□□ 1.72
SHROOM1-204ENST00000440118 ERFEQ4G0M1 354 aa25.79■■□□□ 1.72
SHROOM1-204ENST00000440118 PARP10Q53GL7 1025 aa25.79■■□□□ 1.72
SHROOM1-204ENST00000440118 XAGE3Q8WTP9 111 aa25.79■■□□□ 1.72
SHROOM1-204ENST00000440118 MRS2Q9HD23 443 aa25.79■■□□□ 1.72
SHROOM1-204ENST00000440118 DDX21Q9NR30 783 aaKnown RBP eCLIP25.79■■□□□ 1.72
SHROOM1-204ENST00000440118 MBIPQ9NS73 344 aa25.79■■□□□ 1.72
SHROOM1-204ENST00000440118 CHPF2Q9P2E5 772 aa25.79■■□□□ 1.72
SHROOM1-204ENST00000440118 HOXB7P09629 217 aa25.78■■□□□ 1.72
SHROOM1-204ENST00000440118 GNAI1P63096 354 aa25.78■■□□□ 1.72
SHROOM1-204ENST00000440118 HSP90AB3PQ58FF7 597 aa25.78■■□□□ 1.72
SHROOM1-204ENST00000440118 COPS6Q7L5N1 327 aa25.78■■□□□ 1.72
SHROOM1-204ENST00000440118 RPGRQ92834 1020 aaKnown RBP25.78■■□□□ 1.72
SHROOM1-204ENST00000440118 CEP350Q5VT06 3117 aa25.77■■□□□ 1.72
SHROOM1-204ENST00000440118 CCDC93Q567U6 631 aa25.77■■□□□ 1.72
SHROOM1-204ENST00000440118 SUSD4Q5VX71 490 aa25.77■■□□□ 1.72
SHROOM1-204ENST00000440118 ZNF34Q8IZ26 560 aa25.77■■□□□ 1.72
SHROOM1-204ENST00000440118 IFT57Q9NWB7 429 aa25.77■■□□□ 1.72
SHROOM1-204ENST00000440118 ALDH1B1P30837 517 aa25.76■■□□□ 1.71
SHROOM1-204ENST00000440118 CCDC184Q52MB2 194 aa25.76■■□□□ 1.71
SHROOM1-204ENST00000440118 DUSP27Q5VZP5 1158 aa25.76■■□□□ 1.71
SHROOM1-204ENST00000440118 LRP10Q7Z4F1 713 aa25.76■■□□□ 1.71
SHROOM1-204ENST00000440118 KLRG2A4D1S0 409 aaPredicted RBP25.75■■□□□ 1.71
SHROOM1-204ENST00000440118 RIC1Q4ADV7 1423 aa25.74■■□□□ 1.71
SHROOM1-204ENST00000440118 LTBP3Q9NS15 1303 aa25.74■■□□□ 1.71
SHROOM1-204ENST00000440118 TOMM70O94826 608 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms