RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 TRAK2O60296 914 aa12.7□□□□□ -0.38
CPNE1-218ENST00000439806 IFIT2P09913 472 aaKnown RBP12.7□□□□□ -0.38
CPNE1-218ENST00000439806 G3BP1Q13283 466 aaKnown RBP eCLIP12.7□□□□□ -0.387e-8■□□□□ 11.2
CPNE1-218ENST00000439806 TOM1L2Q6ZVM7 507 aa12.7□□□□□ -0.38
CPNE1-218ENST00000439806 UNC5CLQ8IV45 518 aa12.7□□□□□ -0.38
CPNE1-218ENST00000439806 PI4K2BQ8TCG2 481 aa12.7□□□□□ -0.38
CPNE1-218ENST00000439806 MYD88Q99836 296 aa12.7□□□□□ -0.38
CPNE1-218ENST00000439806 METTL22Q9BUU2 404 aaPredicted RBP12.7□□□□□ -0.38
CPNE1-218ENST00000439806 UBR2Q8IWV8 1755 aa12.7□□□□□ -0.38
CPNE1-218ENST00000439806 NHSL1Q5SYE7 1610 aa12.7□□□□□ -0.38
CPNE1-218ENST00000439806 GOLGA6L22H0YM25 854 aa12.69□□□□□ -0.38
CPNE1-218ENST00000439806 GLRX3O76003 335 aaKnown RBP12.69□□□□□ -0.38
CPNE1-218ENST00000439806 MAP4K4O95819 1239 aaPredicted RBP12.69□□□□□ -0.38
CPNE1-218ENST00000439806 MCM2P49736 904 aa12.69□□□□□ -0.38
CPNE1-218ENST00000439806 ANAPC15P60006 121 aa12.69□□□□□ -0.38
CPNE1-218ENST00000439806 NUCB2P80303 420 aa12.69□□□□□ -0.38
CPNE1-218ENST00000439806 COPS6Q7L5N1 327 aa12.69□□□□□ -0.38
CPNE1-218ENST00000439806 CWC22Q9HCG8 908 aaKnown RBP12.69□□□□□ -0.38
CPNE1-218ENST00000439806 PAPPAQ13219 1627 aa12.69□□□□□ -0.38
CPNE1-218ENST00000439806 GLI3P10071 1580 aa12.69□□□□□ -0.38
CPNE1-218ENST00000439806 SHANK3Q9BYB0 1731 aa12.68□□□□□ -0.38
CPNE1-218ENST00000439806 SOS2Q07890 1332 aaPredicted RBP12.68□□□□□ -0.38
CPNE1-218ENST00000439806 COL5A2P05997 1499 aaPredicted RBP12.68□□□□□ -0.38
CPNE1-218ENST00000439806 NEURL1BA8MQ27 555 aa12.68□□□□□ -0.38
CPNE1-218ENST00000439806 SSFA2P28290 1259 aa12.68□□□□□ -0.38
CPNE1-218ENST00000439806 RUFY2Q8WXA3 655 aa12.68□□□□□ -0.38
CPNE1-218ENST00000439806 BICC1Q9H694 974 aaKnown RBP12.68□□□□□ -0.38
CPNE1-218ENST00000439806 PA2G4Q9UQ80 394 aaKnown RBP12.68□□□□□ -0.38
CPNE1-218ENST00000439806 IGKV5-2P06315 115 aa12.67□□□□□ -0.38
CPNE1-218ENST00000439806 NEK4P51957 841 aa12.67□□□□□ -0.38
CPNE1-218ENST00000439806 SKOR2Q2VWA4 1001 aaPredicted RBP12.67□□□□□ -0.38
CPNE1-218ENST00000439806 ANKRD13DQ6ZTN6 518 aa12.67□□□□□ -0.38
CPNE1-218ENST00000439806 KIAA1211Q6ZU35 1233 aa12.67□□□□□ -0.38
CPNE1-218ENST00000439806 AACSQ86V21 672 aa12.67□□□□□ -0.38
CPNE1-218ENST00000439806 ZCRB1Q8TBF4 217 aaKnown RBP12.67□□□□□ -0.38
CPNE1-218ENST00000439806 DIAPH3Q9NSV4 1193 aa12.67□□□□□ -0.38
CPNE1-218ENST00000439806 ECHDC1Q9NTX5 307 aa12.67□□□□□ -0.38
CPNE1-218ENST00000439806 USP16Q9Y5T5 823 aa12.67□□□□□ -0.38
CPNE1-218ENST00000439806 NUP188Q5SRE5 1749 aa12.67□□□□□ -0.38
CPNE1-218ENST00000439806 ERBB4Q15303 1308 aa12.66□□□□□ -0.38
CPNE1-218ENST00000439806 GCKRQ14397 625 aa12.66□□□□□ -0.38
CPNE1-218ENST00000439806 IL27Q8NEV9 243 aa12.66□□□□□ -0.38
CPNE1-218ENST00000439806 SLAIN2Q9P270 581 aa12.66□□□□□ -0.38
CPNE1-218ENST00000439806 ZNF335Q9H4Z2 1342 aaPredicted RBP12.65□□□□□ -0.38
CPNE1-218ENST00000439806 GOLGA6L3A6NEY3 463 aa12.65□□□□□ -0.38
CPNE1-218ENST00000439806 SGSM2O43147 1006 aa12.65□□□□□ -0.38
CPNE1-218ENST00000439806 IL2RBP14784 551 aa12.65□□□□□ -0.38
CPNE1-218ENST00000439806 GZF1Q9H116 711 aaPredicted RBP12.65□□□□□ -0.38
CPNE1-218ENST00000439806 PALD1Q9ULE6 856 aa12.65□□□□□ -0.38
CPNE1-218ENST00000439806 RAD50Q92878 1312 aa12.64□□□□□ -0.39
CPNE1-218ENST00000439806 ERVV-2B6SEH9 535 aa12.64□□□□□ -0.39
CPNE1-218ENST00000439806 HSPA4P34932 840 aa12.64□□□□□ -0.39
CPNE1-218ENST00000439806 PIP4K2AP48426 406 aaPredicted RBP12.64□□□□□ -0.39
CPNE1-218ENST00000439806 EVA1CP58658 441 aa12.64□□□□□ -0.39
CPNE1-218ENST00000439806 PLBD2Q8NHP8 589 aa12.64□□□□□ -0.39
CPNE1-218ENST00000439806 EVI5LQ96CN4 794 aa12.64□□□□□ -0.39
CPNE1-218ENST00000439806 IL17RAQ96F46 866 aa12.64□□□□□ -0.39
CPNE1-218ENST00000439806 KAZALD1Q96I82 304 aa12.64□□□□□ -0.39
CPNE1-218ENST00000439806 CARD10Q9BWT7 1032 aa12.64□□□□□ -0.39
CPNE1-218ENST00000439806 STRN4Q9NRL3 753 aa12.64□□□□□ -0.39
CPNE1-218ENST00000439806 HIP1O00291 1037 aa12.63□□□□□ -0.39
CPNE1-218ENST00000439806 SASH1O94885 1247 aa12.63□□□□□ -0.39
CPNE1-218ENST00000439806 BAG4O95429 457 aaKnown RBP12.63□□□□□ -0.39
CPNE1-218ENST00000439806 CLEC17AQ6ZS10 378 aa12.63□□□□□ -0.39
CPNE1-218ENST00000439806 SIL1Q9H173 461 aa12.63□□□□□ -0.39
CPNE1-218ENST00000439806 KCPQ6ZWJ8 1503 aa12.62□□□□□ -0.39
CPNE1-218ENST00000439806 TJP1Q07157 1748 aa12.62□□□□□ -0.39
CPNE1-218ENST00000439806 TOGARAM1Q9Y4F4 1720 aa12.62□□□□□ -0.39
CPNE1-218ENST00000439806 COL15A1P39059 1388 aa12.62□□□□□ -0.39
CPNE1-218ENST00000439806 CWC27Q6UX04 472 aaKnown RBP12.62□□□□□ -0.39
CPNE1-218ENST00000439806 NOL8Q76FK4 1167 aaKnown RBP12.62□□□□□ -0.39
CPNE1-218ENST00000439806 LRP10Q7Z4F1 713 aa12.62□□□□□ -0.39
CPNE1-218ENST00000439806 ZGPATQ8N5A5 531 aaKnown RBP12.62□□□□□ -0.39
CPNE1-218ENST00000439806 TMX3Q96JJ7 454 aa12.62□□□□□ -0.39
CPNE1-218ENST00000439806 LSG1Q9H089 658 aaKnown RBP12.62□□□□□ -0.39
CPNE1-218ENST00000439806 CCDC8Q9H0W5 538 aaPredicted RBP12.62□□□□□ -0.39
CPNE1-218ENST00000439806 BRPF3Q9ULD4 1205 aa12.62□□□□□ -0.39
CPNE1-218ENST00000439806 A0A087WZG4 1122 aa12.61□□□□□ -0.39
CPNE1-218ENST00000439806 CYP2E1P05181 493 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-218ENST00000439806 NKX1-1Q15270 411 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-218ENST00000439806 EPHA10Q5JZY3 1008 aa12.61□□□□□ -0.39
CPNE1-218ENST00000439806 UBE3BQ7Z3V4 1068 aa12.61□□□□□ -0.39
CPNE1-218ENST00000439806 IL25Q9H293 177 aa12.61□□□□□ -0.39
CPNE1-218ENST00000439806 ATP5J2-PTCD1G3V325 749 aa12.6□□□□□ -0.39
CPNE1-218ENST00000439806 PTCD1O75127 700 aaKnown RBP12.6□□□□□ -0.39
CPNE1-218ENST00000439806 CUL4AQ13619 759 aa12.6□□□□□ -0.39
CPNE1-218ENST00000439806 DDX54Q8TDD1 881 aaKnown RBP12.6□□□□□ -0.39
CPNE1-218ENST00000439806 JARID2Q92833 1246 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-218ENST00000439806 EAF2Q96CJ1 260 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-218ENST00000439806 COPRSQ9NQ92 184 aa12.6□□□□□ -0.39
CPNE1-218ENST00000439806 ISY1Q9ULR0 285 aaKnown RBP12.6□□□□□ -0.39
CPNE1-218ENST00000439806 SNX14Q9Y5W7 946 aa12.6□□□□□ -0.39
CPNE1-218ENST00000439806 COL14A1Q05707 1796 aaKnown RBP12.6□□□□□ -0.39
CPNE1-218ENST00000439806 ITGB4P16144 1822 aa12.6□□□□□ -0.39
CPNE1-218ENST00000439806 KDM4FA0A1W2PPD8 638 aa12.59□□□□□ -0.39
CPNE1-218ENST00000439806 MCTP1Q6DN14 999 aa12.59□□□□□ -0.39
CPNE1-218ENST00000439806 KLHDC4Q8TBB5 520 aa12.59□□□□□ -0.39
CPNE1-218ENST00000439806 INTS4Q96HW7 963 aaKnown RBP12.59□□□□□ -0.39
CPNE1-218ENST00000439806 ARXQ96QS3 562 aa12.59□□□□□ -0.39
CPNE1-218ENST00000439806 FSD1Q9BTV5 496 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms