RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 RRP7AQ9Y3A4 280 aaKnown RBP24.67■■□□□ 1.54
CCDC78-204ENST00000439619 LMNB1P20700 586 aa24.66■■□□□ 1.54
CCDC78-204ENST00000439619 GTF2E1P29083 439 aaPredicted RBP24.66■■□□□ 1.54
CCDC78-204ENST00000439619 NGEFQ8N5V2 710 aa24.66■■□□□ 1.54
CCDC78-204ENST00000439619 RUNDC1Q96C34 613 aa24.66■■□□□ 1.54
CCDC78-204ENST00000439619 ERBB4Q15303 1308 aa24.65■■□□□ 1.54
CCDC78-204ENST00000439619 ZC3H4Q9UPT8 1303 aaKnown RBP24.65■■□□□ 1.54
CCDC78-204ENST00000439619 ZEB1P37275 1124 aaPredicted RBP24.65■■□□□ 1.54
CCDC78-204ENST00000439619 STYK1Q6J9G0 422 aa24.65■■□□□ 1.54
CCDC78-204ENST00000439619 ERVV-1B6SEH8 477 aa24.64■■□□□ 1.54
CCDC78-204ENST00000439619 KIF3CO14782 793 aa24.64■■□□□ 1.54
CCDC78-204ENST00000439619 NEUROD2Q15784 382 aa24.64■■□□□ 1.54
CCDC78-204ENST00000439619 CCDC146Q8IYE0 955 aa24.64■■□□□ 1.54
CCDC78-204ENST00000439619 C16orf71Q8IYS4 520 aaPredicted RBP24.64■■□□□ 1.54
CCDC78-204ENST00000439619 MASTLQ96GX5 879 aa24.64■■□□□ 1.54
CCDC78-204ENST00000439619 BCORQ6W2J9 1755 aa24.63■■□□□ 1.53
CCDC78-204ENST00000439619 MYL6BP14649 208 aa24.63■■□□□ 1.53
CCDC78-204ENST00000439619 SOGA3Q5TF21 947 aa24.63■■□□□ 1.53
CCDC78-204ENST00000439619 PRKRIP1Q9H875 184 aaPredicted RBP24.63■■□□□ 1.53
CCDC78-204ENST00000439619 DLG5Q8TDM6 1919 aa24.63■■□□□ 1.53
CCDC78-204ENST00000439619 TOMM70O94826 608 aa24.62■■□□□ 1.53
CCDC78-204ENST00000439619 SRGNP10124 158 aa24.62■■□□□ 1.53
CCDC78-204ENST00000439619 RASSF7Q02833 373 aa24.62■■□□□ 1.53
CCDC78-204ENST00000439619 NYXQ9GZU5 481 aa24.62■■□□□ 1.53
CCDC78-204ENST00000439619 KDM3BQ7LBC6 1761 aa24.62■■□□□ 1.53
CCDC78-204ENST00000439619 C21orf2O43822 256 aa24.61■■□□□ 1.53
CCDC78-204ENST00000439619 LAMB4A4D0S4 1761 aa24.61■■□□□ 1.53
CCDC78-204ENST00000439619 MAP3K15Q6ZN16 1313 aa24.61■■□□□ 1.53
CCDC78-204ENST00000439619 DLEC1Q9Y238 1755 aa24.6■■□□□ 1.53
CCDC78-204ENST00000439619 FAM177BA6PVY3 158 aa24.6■■□□□ 1.53
CCDC78-204ENST00000439619 HLFQ16534 295 aa24.6■■□□□ 1.53
CCDC78-204ENST00000439619 NMRK2Q9NPI5 230 aa24.6■■□□□ 1.53
CCDC78-204ENST00000439619 ZNF219Q9P2Y4 722 aaPredicted RBP24.6■■□□□ 1.53
CCDC78-204ENST00000439619 ADAMTS8Q9UP79 889 aa24.6■■□□□ 1.53
CCDC78-204ENST00000439619 NPR1P16066 1061 aa24.59■■□□□ 1.53
CCDC78-204ENST00000439619 HSPA6P17066 643 aa24.59■■□□□ 1.53
CCDC78-204ENST00000439619 EIF2S2P20042 333 aaKnown RBP24.58■■□□□ 1.53
CCDC78-204ENST00000439619 PRPF40BQ6NWY9 871 aaKnown RBP24.58■■□□□ 1.53
CCDC78-204ENST00000439619 LAS1LQ9Y4W2 734 aaKnown RBP24.57■■□□□ 1.52
CCDC78-204ENST00000439619 NFKBIEO00221 500 aa24.56■■□□□ 1.52
CCDC78-204ENST00000439619 TTLL7Q6ZT98 887 aa24.56■■□□□ 1.52
CCDC78-204ENST00000439619 TAOK3Q9H2K8 898 aa24.56■■□□□ 1.52
CCDC78-204ENST00000439619 ZBTB3Q9H5J0 574 aa24.56■■□□□ 1.52
CCDC78-204ENST00000439619 KLRG2A4D1S0 409 aaPredicted RBP24.55■■□□□ 1.52
CCDC78-204ENST00000439619 ALDH1B1P30837 517 aa24.55■■□□□ 1.52
CCDC78-204ENST00000439619 DPY19L2Q6NUT2 758 aa24.55■■□□□ 1.52
CCDC78-204ENST00000439619 ANKRD31Q8N7Z5 1873 aa24.54■■□□□ 1.52
CCDC78-204ENST00000439619 GLTPD2A6NH11 291 aa24.53■■□□□ 1.52
CCDC78-204ENST00000439619 CHL1O00533 1208 aa24.53■■□□□ 1.52
CCDC78-204ENST00000439619 RBM46Q8TBY0 533 aaKnown RBP24.53■■□□□ 1.52
CCDC78-204ENST00000439619 RRAGCQ9HB90 399 aa24.53■■□□□ 1.52
CCDC78-204ENST00000439619 LTBP3Q9NS15 1303 aa24.53■■□□□ 1.52
CCDC78-204ENST00000439619 GPTP24298 496 aa24.52■■□□□ 1.52
CCDC78-204ENST00000439619 ERFEQ4G0M1 354 aa24.52■■□□□ 1.52
CCDC78-204ENST00000439619 CCDC93Q567U6 631 aa24.52■■□□□ 1.52
CCDC78-204ENST00000439619 GIGYF2Q6Y7W6 1299 aaKnown RBP24.52■■□□□ 1.52
CCDC78-204ENST00000439619 PPP1R42Q7Z4L9 355 aa24.52■■□□□ 1.52
CCDC78-204ENST00000439619 TRIM35Q9UPQ4 493 aa24.52■■□□□ 1.52
CCDC78-204ENST00000439619 CALD1Q05682 793 aaKnown RBP24.51■■□□□ 1.51
CCDC78-204ENST00000439619 PARP10Q53GL7 1025 aa24.51■■□□□ 1.51
CCDC78-204ENST00000439619 IBTKQ9P2D0 1353 aaPredicted RBP24.51■■□□□ 1.51
CCDC78-204ENST00000439619 COL11A2P13942 1736 aaPredicted RBP24.49■■□□□ 1.51
CCDC78-204ENST00000439619 VEGFAP15692 232 aaPredicted RBP24.49■■□□□ 1.51
CCDC78-204ENST00000439619 APLP1P51693 650 aa24.49■■□□□ 1.51
CCDC78-204ENST00000439619 FSTL1Q12841 308 aa24.49■■□□□ 1.51
CCDC78-204ENST00000439619 HSP90AB3PQ58FF7 597 aa24.49■■□□□ 1.51
CCDC78-204ENST00000439619 NUTM1Q86Y26 1132 aa24.49■■□□□ 1.51
CCDC78-204ENST00000439619 ZNF34Q8IZ26 560 aa24.49■■□□□ 1.51
CCDC78-204ENST00000439619 RPGRQ92834 1020 aaKnown RBP24.49■■□□□ 1.51
CCDC78-204ENST00000439619 HOXB7P09629 217 aa24.48■■□□□ 1.51
CCDC78-204ENST00000439619 PRELPP51888 382 aa24.48■■□□□ 1.51
CCDC78-204ENST00000439619 PDIA6Q15084 440 aa24.48■■□□□ 1.51
CCDC78-204ENST00000439619 RTKN2Q8IZC4 609 aa24.48■■□□□ 1.51
CCDC78-204ENST00000439619 NECTIN2Q92692 538 aa24.48■■□□□ 1.51
CCDC78-204ENST00000439619 CFAP44Q96MT7 982 aa24.48■■□□□ 1.51
CCDC78-204ENST00000439619 SUSD4Q5VX71 490 aa24.47■■□□□ 1.51
CCDC78-204ENST00000439619 DDX21Q9NR30 783 aaKnown RBP eCLIP24.47■■□□□ 1.51
CCDC78-204ENST00000439619 UBN2Q6ZU65 1347 aa24.46■■□□□ 1.51
CCDC78-204ENST00000439619 AIMP1Q12904 312 aaKnown RBP24.46■■□□□ 1.51
CCDC78-204ENST00000439619 HDGFL1Q5TGJ6 251 aa24.46■■□□□ 1.51
CCDC78-204ENST00000439619 COPS6Q7L5N1 327 aa24.46■■□□□ 1.51
CCDC78-204ENST00000439619 APAF1O14727 1248 aa24.45■■□□□ 1.5
CCDC78-204ENST00000439619 ANXA1P04083 346 aa24.45■■□□□ 1.5
CCDC78-204ENST00000439619 PROSER3Q2NL68 480 aa24.45■■□□□ 1.5
CCDC78-204ENST00000439619 CRY2Q49AN0 593 aa24.45■■□□□ 1.5
CCDC78-204ENST00000439619 LRP10Q7Z4F1 713 aa24.45■■□□□ 1.5
CCDC78-204ENST00000439619 C7orf43Q8WVR3 580 aa24.45■■□□□ 1.5
CCDC78-204ENST00000439619 UTP14AQ9BVJ6 771 aaKnown RBP24.45■■□□□ 1.5
CCDC78-204ENST00000439619 SBF1O95248 1867 aa24.45■■□□□ 1.5
CCDC78-204ENST00000439619 RIC1Q4ADV7 1423 aa24.44■■□□□ 1.5
CCDC78-204ENST00000439619 TNRC6CQ9HCJ0 1690 aaKnown RBP24.44■■□□□ 1.5
CCDC78-204ENST00000439619 FKBP4Q02790 459 aaKnown RBP eCLIP24.44■■□□□ 1.5
CCDC78-204ENST00000439619 CC2D2BQ6DHV5 1058 aa24.44■■□□□ 1.5
CCDC78-204ENST00000439619 SMC1BQ8NDV3 1235 aa24.44■■□□□ 1.5
CCDC78-204ENST00000439619 XAGE3Q8WTP9 111 aa24.44■■□□□ 1.5
CCDC78-204ENST00000439619 RBM17Q96I25 401 aaKnown RBP24.44■■□□□ 1.5
CCDC78-204ENST00000439619 ABCC12Q96J65 1359 aa24.43■■□□□ 1.5
CCDC78-204ENST00000439619 RNF123Q5XPI4 1314 aa24.43■■□□□ 1.5
CCDC78-204ENST00000439619 NTSR2O95665 410 aa24.43■■□□□ 1.5
CCDC78-204ENST00000439619 NLRP3Q96P20 1036 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms