RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 SENP3-EIF4A1A0A087X0R7 540 aa6.76□□□□□ -1.33
LSM1P1-201ENST00000438629 A0A1W2PNR3 127 aa6.76□□□□□ -1.33
LSM1P1-201ENST00000438629 SOWAHDA6NJG2 315 aa6.76□□□□□ -1.33
LSM1P1-201ENST00000438629 ATP4AP20648 1035 aa6.76□□□□□ -1.33
LSM1P1-201ENST00000438629 SCNN1AP37088 669 aa6.76□□□□□ -1.33
LSM1P1-201ENST00000438629 SERPINB4P48594 390 aa6.76□□□□□ -1.33
LSM1P1-201ENST00000438629 DGKZQ13574 1117 aa6.76□□□□□ -1.33
LSM1P1-201ENST00000438629 FIGNL1Q6PIW4 674 aa6.76□□□□□ -1.33
LSM1P1-201ENST00000438629 RIPOR1Q6ZS17 1223 aa6.76□□□□□ -1.33
LSM1P1-201ENST00000438629 GLYCTKQ8IVS8 523 aa6.76□□□□□ -1.33
LSM1P1-201ENST00000438629 CCDC155Q8N6L0 562 aa6.76□□□□□ -1.33
LSM1P1-201ENST00000438629 IFT43Q96FT9 208 aa6.76□□□□□ -1.33
LSM1P1-201ENST00000438629 SAP130Q9H0E3 1048 aa6.76□□□□□ -1.33
LSM1P1-201ENST00000438629 GPAMQ9HCL2 828 aa6.76□□□□□ -1.33
LSM1P1-201ENST00000438629 FAM13BQ9NYF5 915 aa6.76□□□□□ -1.33
LSM1P1-201ENST00000438629 NPR3P17342 541 aa6.75□□□□□ -1.33
LSM1P1-201ENST00000438629 IER5Q5VY09 327 aa6.75□□□□□ -1.33
LSM1P1-201ENST00000438629 TRIM22Q8IYM9 498 aa6.75□□□□□ -1.33
LSM1P1-201ENST00000438629 SUSD3Q96L08 255 aa6.75□□□□□ -1.33
LSM1P1-201ENST00000438629 LRFN2Q9ULH4 789 aa6.75□□□□□ -1.33
LSM1P1-201ENST00000438629 TGFBR3LH3BV60 316 aa6.74□□□□□ -1.33
LSM1P1-201ENST00000438629 LCE2BO14633 110 aa6.74□□□□□ -1.33
LSM1P1-201ENST00000438629 NOM1Q5C9Z4 860 aaKnown RBP6.74□□□□□ -1.33
LSM1P1-201ENST00000438629 FOXR1Q6PIV2 292 aa6.74□□□□□ -1.33
LSM1P1-201ENST00000438629 SND1Q7KZF4 910 aaKnown RBP eCLIP6.74□□□□□ -1.33
LSM1P1-201ENST00000438629 RUBCNLQ9H714 662 aa6.74□□□□□ -1.33
LSM1P1-201ENST00000438629 H3BRB1 525 aa6.73□□□□□ -1.33
LSM1P1-201ENST00000438629 ITGA6P23229 1130 aa6.73□□□□□ -1.33
LSM1P1-201ENST00000438629 ZNF211Q13398 564 aaPredicted RBP6.73□□□□□ -1.33
LSM1P1-201ENST00000438629 AAMPQ13685 434 aa6.73□□□□□ -1.33
LSM1P1-201ENST00000438629 SAMD5Q5TGI4 173 aa6.73□□□□□ -1.33
LSM1P1-201ENST00000438629 ZNF787Q6DD87 383 aa6.73□□□□□ -1.33
LSM1P1-201ENST00000438629 LRRC69Q6ZNQ3 347 aa6.73□□□□□ -1.33
LSM1P1-201ENST00000438629 NPAS3Q8IXF0 933 aa6.73□□□□□ -1.33
LSM1P1-201ENST00000438629 NUCKS1Q9H1E3 243 aaKnown RBP6.73□□□□□ -1.33
LSM1P1-201ENST00000438629 TUT1Q9H6E5 874 aaKnown RBP6.73□□□□□ -1.33
LSM1P1-201ENST00000438629 ANO2Q9NQ90 1003 aa6.73□□□□□ -1.33
LSM1P1-201ENST00000438629 KLK14Q9P0G3 267 aa6.73□□□□□ -1.33
LSM1P1-201ENST00000438629 BIN2Q9UBW5 565 aaPredicted RBP6.73□□□□□ -1.33
LSM1P1-201ENST00000438629 TNFRSF10BO14763 440 aa6.72□□□□□ -1.33
LSM1P1-201ENST00000438629 PPFIA3O75145 1194 aa6.72□□□□□ -1.33
LSM1P1-201ENST00000438629 MICAL2O94851 1124 aa6.72□□□□□ -1.33
LSM1P1-201ENST00000438629 RPLP1P05386 114 aaKnown RBP6.72□□□□□ -1.33
LSM1P1-201ENST00000438629 PCSK2P16519 638 aa6.72□□□□□ -1.33
LSM1P1-201ENST00000438629 PHF24Q9UPV7 400 aa6.72□□□□□ -1.33
LSM1P1-201ENST00000438629 PCDHGC4Q9Y5F7 938 aa6.72□□□□□ -1.33
LSM1P1-201ENST00000438629 POTECB2RU33 542 aa6.71□□□□□ -1.34
LSM1P1-201ENST00000438629 EPB42P16452 691 aa6.71□□□□□ -1.34
LSM1P1-201ENST00000438629 DBN1Q16643 649 aa6.71□□□□□ -1.34
LSM1P1-201ENST00000438629 TMCO4Q5TGY1 634 aa6.71□□□□□ -1.34
LSM1P1-201ENST00000438629 TREML1Q86YW5 311 aa6.71□□□□□ -1.34
LSM1P1-201ENST00000438629 CITED4Q96RK1 184 aa6.71□□□□□ -1.34
LSM1P1-201ENST00000438629 ZCCHC2Q9C0B9 1178 aaKnown RBP6.71□□□□□ -1.34
LSM1P1-201ENST00000438629 C11orf16Q9NQ32 467 aa6.71□□□□□ -1.34
LSM1P1-201ENST00000438629 NXF1Q9UBU9 619 aaKnown RBP6.71□□□□□ -1.34
LSM1P1-201ENST00000438629 ATXN7O15265 892 aaPredicted RBP6.7□□□□□ -1.34
LSM1P1-201ENST00000438629 MPSTP25325 297 aa6.7□□□□□ -1.34
LSM1P1-201ENST00000438629 USP5P45974 858 aa6.7□□□□□ -1.34
LSM1P1-201ENST00000438629 EIF1AXP47813 144 aaKnown RBP6.7□□□□□ -1.34
LSM1P1-201ENST00000438629 ARSDP51689 593 aa6.7□□□□□ -1.34
LSM1P1-201ENST00000438629 MTMR3Q13615 1198 aa6.7□□□□□ -1.34
LSM1P1-201ENST00000438629 LAMC2Q13753 1193 aa6.7□□□□□ -1.34
LSM1P1-201ENST00000438629 SV2AQ7L0J3 742 aa6.7□□□□□ -1.34
LSM1P1-201ENST00000438629 BTLAQ7Z6A9 289 aa6.7□□□□□ -1.34
LSM1P1-201ENST00000438629 ZNF280CQ8ND82 737 aa6.7□□□□□ -1.34
LSM1P1-201ENST00000438629 TTC16Q8NEE8 873 aa6.7□□□□□ -1.34
LSM1P1-201ENST00000438629 NANOS1Q8WY41 292 aaKnown RBP6.7□□□□□ -1.34
LSM1P1-201ENST00000438629 PIK3R5Q8WYR1 880 aa6.7□□□□□ -1.34
LSM1P1-201ENST00000438629 HSH2DQ96JZ2 352 aa6.7□□□□□ -1.34
LSM1P1-201ENST00000438629 CEP63Q96MT8 703 aa6.7□□□□□ -1.34
LSM1P1-201ENST00000438629 TRERF1Q96PN7 1200 aa6.7□□□□□ -1.34
LSM1P1-201ENST00000438629 DMGDHQ9UI17 866 aaKnown RBP6.7□□□□□ -1.34
LSM1P1-201ENST00000438629 BCS1LQ9Y276 419 aa6.7□□□□□ -1.34
LSM1P1-201ENST00000438629 ZAP70P43403 619 aa6.69□□□□□ -1.34
LSM1P1-201ENST00000438629 IDH3AP50213 366 aa6.69□□□□□ -1.34
LSM1P1-201ENST00000438629 CCDC27Q2M243 656 aa6.69□□□□□ -1.34
LSM1P1-201ENST00000438629 ETFBKMTQ8IXQ9 262 aa6.69□□□□□ -1.34
LSM1P1-201ENST00000438629 SLC16A10Q8TF71 515 aa6.69□□□□□ -1.34
LSM1P1-201ENST00000438629 CFHR5Q9BXR6 569 aa6.69□□□□□ -1.34
LSM1P1-201ENST00000438629 BRPF3Q9ULD4 1205 aa6.69□□□□□ -1.34
LSM1P1-201ENST00000438629 NDUFB5O43674 189 aa6.68□□□□□ -1.34
LSM1P1-201ENST00000438629 FAM157BP0CG42 384 aa6.68□□□□□ -1.34
LSM1P1-201ENST00000438629 MZF1P28698 734 aaPredicted RBP6.68□□□□□ -1.34
LSM1P1-201ENST00000438629 ZNF837Q96EG3 531 aaPredicted RBP6.68□□□□□ -1.34
LSM1P1-201ENST00000438629 FNDC3AQ9Y2H6 1198 aaKnown RBP6.68□□□□□ -1.34
LSM1P1-201ENST00000438629 CDC14CA4D256 554 aa6.67□□□□□ -1.34
LSM1P1-201ENST00000438629 INPP5BP32019 993 aa6.67□□□□□ -1.34
LSM1P1-201ENST00000438629 MARSP56192 900 aaKnown RBP6.67□□□□□ -1.34
LSM1P1-201ENST00000438629 KCNQ4P56696 695 aa6.67□□□□□ -1.34
LSM1P1-201ENST00000438629 ARHGAP4P98171 946 aa6.67□□□□□ -1.34
LSM1P1-201ENST00000438629 ECM1Q16610 540 aa6.67□□□□□ -1.34
LSM1P1-201ENST00000438629 ZSCAN29Q8IWY8 852 aaPredicted RBP6.67□□□□□ -1.34
LSM1P1-201ENST00000438629 VWA5B2Q8N398 1253 aa6.67□□□□□ -1.34
LSM1P1-201ENST00000438629 BRD7Q9NPI1 651 aa6.67□□□□□ -1.34
LSM1P1-201ENST00000438629 CUEDC1Q9NWM3 386 aaPredicted RBP6.67□□□□□ -1.34
LSM1P1-201ENST00000438629 DCTN4Q9UJW0 460 aa6.67□□□□□ -1.34
LSM1P1-201ENST00000438629 ATXN7L1Q9ULK2 861 aaPredicted RBP6.67□□□□□ -1.34
LSM1P1-201ENST00000438629 KCNH4Q9UQ05 1017 aa6.67□□□□□ -1.34
LSM1P1-201ENST00000438629 CCDC9Q9Y3X0 531 aaKnown RBP6.67□□□□□ -1.34
LSM1P1-201ENST00000438629 OPLAHO14841 1288 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms