RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 TMPOP42166 694 aaKnown RBP11.3□□□□□ -0.6
HERPUD2-206ENST00000438224 PIP4K2AP48426 406 aaPredicted RBP11.3□□□□□ -0.6
HERPUD2-206ENST00000438224 EIF5P55010 431 aaKnown RBP11.3□□□□□ -0.6
HERPUD2-206ENST00000438224 TAF7Q15545 349 aaPredicted RBP11.3□□□□□ -0.6
HERPUD2-206ENST00000438224 USPL1Q5W0Q7 1092 aa11.3□□□□□ -0.6
HERPUD2-206ENST00000438224 PIP4P2Q8N4L2 257 aa11.3□□□□□ -0.6
HERPUD2-206ENST00000438224 ADAMTS8Q9UP79 889 aa11.3□□□□□ -0.6
HERPUD2-206ENST00000438224 RRP7AQ9Y3A4 280 aaKnown RBP11.3□□□□□ -0.6
HERPUD2-206ENST00000438224 CD2APQ9Y5K6 639 aa11.3□□□□□ -0.6
HERPUD2-206ENST00000438224 MAPK8IP3Q9UPT6 1336 aa11.3□□□□□ -0.6
HERPUD2-206ENST00000438224 NUP98P52948 1817 aa11.3□□□□□ -0.6
HERPUD2-206ENST00000438224 DLEC1Q9Y238 1755 aa11.29□□□□□ -0.6
HERPUD2-206ENST00000438224 NLGN1Q8N2Q7 840 aa11.29□□□□□ -0.6
HERPUD2-206ENST00000438224 WDR70Q9NW82 654 aa11.29□□□□□ -0.6
HERPUD2-206ENST00000438224 NARFQ9UHQ1 456 aa11.29□□□□□ -0.6
HERPUD2-206ENST00000438224 ARFGEF1Q9Y6D6 1849 aa11.29□□□□□ -0.6
HERPUD2-206ENST00000438224 STARD3NLO95772 234 aa11.28□□□□□ -0.6
HERPUD2-206ENST00000438224 NEFMP07197 916 aa11.28□□□□□ -0.6
HERPUD2-206ENST00000438224 TM4SF1P30408 202 aa11.28□□□□□ -0.6
HERPUD2-206ENST00000438224 RIPK4P57078 832 aa11.28□□□□□ -0.6
HERPUD2-206ENST00000438224 WWC3Q9ULE0 1092 aa11.28□□□□□ -0.6
HERPUD2-206ENST00000438224 COL11A2P13942 1736 aaPredicted RBP11.28□□□□□ -0.6
HERPUD2-206ENST00000438224 NBPF26B4DH59 902 aa11.27□□□□□ -0.61
HERPUD2-206ENST00000438224 POLRMTO00411 1230 aaKnown RBP11.27□□□□□ -0.61
HERPUD2-206ENST00000438224 PITPNM1O00562 1244 aa11.27□□□□□ -0.61
HERPUD2-206ENST00000438224 NFIXQ14938 502 aa11.27□□□□□ -0.61
HERPUD2-206ENST00000438224 NBPF10Q6P3W6 841 aaKnown RBP11.27□□□□□ -0.61
HERPUD2-206ENST00000438224 PELP1Q8IZL8 1130 aaKnown RBP11.27□□□□□ -0.61
HERPUD2-206ENST00000438224 NBPF15Q8N660 670 aa11.27□□□□□ -0.61
HERPUD2-206ENST00000438224 RUNDC1Q96C34 613 aa11.27□□□□□ -0.61
HERPUD2-206ENST00000438224 FAM212AQ96EL1 285 aa11.27□□□□□ -0.61
HERPUD2-206ENST00000438224 TEX13AQ9BXU3 409 aaPredicted RBP11.27□□□□□ -0.61
HERPUD2-206ENST00000438224 TRIM35Q9UPQ4 493 aa11.27□□□□□ -0.61
HERPUD2-206ENST00000438224 CACNA1SQ13698 1873 aa11.27□□□□□ -0.61
HERPUD2-206ENST00000438224 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.26□□□□□ -0.61
HERPUD2-206ENST00000438224 SNRPA1P09661 255 aaKnown RBP11.26□□□□□ -0.61
HERPUD2-206ENST00000438224 IL6STP40189 918 aaPredicted RBP11.26□□□□□ -0.61
HERPUD2-206ENST00000438224 EIF4A1P60842 406 aaKnown RBP11.26□□□□□ -0.61
HERPUD2-206ENST00000438224 WDR43Q15061 677 aaKnown RBP eCLIP11.26□□□□□ -0.61
HERPUD2-206ENST00000438224 GPR162Q16538 588 aa11.26□□□□□ -0.61
HERPUD2-206ENST00000438224 ZFP91Q96JP5 570 aaPredicted RBP11.26□□□□□ -0.61
HERPUD2-206ENST00000438224 PNNQ9H307 717 aaKnown RBP11.26□□□□□ -0.61
HERPUD2-206ENST00000438224 TBC1D2BQ9UPU7 963 aa11.26□□□□□ -0.61
HERPUD2-206ENST00000438224 CARMIL3Q8ND23 1372 aa11.26□□□□□ -0.61
HERPUD2-206ENST00000438224 ZPR1O75312 459 aa11.25□□□□□ -0.61
HERPUD2-206ENST00000438224 CAMTA2O94983 1202 aa11.25□□□□□ -0.61
HERPUD2-206ENST00000438224 CHRM1P11229 460 aaPredicted RBP11.25□□□□□ -0.61
HERPUD2-206ENST00000438224 YY1P25490 414 aa11.25□□□□□ -0.61
HERPUD2-206ENST00000438224 NEUROD2Q15784 382 aa11.25□□□□□ -0.61
HERPUD2-206ENST00000438224 ZNF330Q9Y3S2 320 aaPredicted RBP11.25□□□□□ -0.61
HERPUD2-206ENST00000438224 PARP3Q9Y6F1 533 aa11.25□□□□□ -0.61
HERPUD2-206ENST00000438224 SBF1O95248 1867 aa11.24□□□□□ -0.61
HERPUD2-206ENST00000438224 A0A0G2JLW4 131 aa11.24□□□□□ -0.61
HERPUD2-206ENST00000438224 GIGYF1O75420 1035 aaPredicted RBP11.24□□□□□ -0.61
HERPUD2-206ENST00000438224 TBC1D9BQ66K14 1250 aa11.24□□□□□ -0.61
HERPUD2-206ENST00000438224 SP7Q8TDD2 431 aaPredicted RBP11.24□□□□□ -0.61
HERPUD2-206ENST00000438224 CCDC88AQ3V6T2 1871 aa11.23□□□□□ -0.61
HERPUD2-206ENST00000438224 DPEP1P16444 411 aa11.23□□□□□ -0.61
HERPUD2-206ENST00000438224 KCNA3P22001 575 aa11.23□□□□□ -0.61
HERPUD2-206ENST00000438224 KRT24Q2M2I5 525 aa11.23□□□□□ -0.61
HERPUD2-206ENST00000438224 PNISRQ8TF01 805 aaKnown RBP11.23□□□□□ -0.61
HERPUD2-206ENST00000438224 ANKRD36CQ5JPF3 1778 aa11.23□□□□□ -0.61
HERPUD2-206ENST00000438224 A0A087WZG4 1122 aa11.22□□□□□ -0.61
HERPUD2-206ENST00000438224 SENP3-EIF4A1A0A087X0R7 540 aa11.22□□□□□ -0.61
HERPUD2-206ENST00000438224 APAF1O14727 1248 aa11.22□□□□□ -0.61
HERPUD2-206ENST00000438224 CHRNA5P30532 468 aa11.22□□□□□ -0.61
HERPUD2-206ENST00000438224 FXR2P51116 673 aaKnown RBP eCLIP11.22□□□□□ -0.61
HERPUD2-206ENST00000438224 BICDL1Q6ZP65 573 aa11.22□□□□□ -0.61
HERPUD2-206ENST00000438224 DZIP3Q86Y13 1208 aaKnown RBP11.22□□□□□ -0.61
HERPUD2-206ENST00000438224 TSPYL4Q9UJ04 414 aa11.22□□□□□ -0.61
HERPUD2-206ENST00000438224 TNRC6CQ9HCJ0 1690 aaKnown RBP11.21□□□□□ -0.61
HERPUD2-206ENST00000438224 CHL1O00533 1208 aa11.21□□□□□ -0.61
HERPUD2-206ENST00000438224 SERPINB2P05120 415 aa11.21□□□□□ -0.61
HERPUD2-206ENST00000438224 LMOD3Q0VAK6 560 aa11.21□□□□□ -0.61
HERPUD2-206ENST00000438224 LRP10Q7Z4F1 713 aa11.21□□□□□ -0.61
HERPUD2-206ENST00000438224 ARFGEF2Q9Y6D5 1785 aa11.21□□□□□ -0.62
HERPUD2-206ENST00000438224 TGFB2P61812 414 aa11.2□□□□□ -0.62
HERPUD2-206ENST00000438224 PDIA6Q15084 440 aa11.2□□□□□ -0.62
HERPUD2-206ENST00000438224 PROSER3Q2NL68 480 aa11.2□□□□□ -0.62
HERPUD2-206ENST00000438224 CCDC24Q8N4L8 307 aa11.2□□□□□ -0.62
HERPUD2-206ENST00000438224 SLX4Q8IY92 1834 aa11.2□□□□□ -0.62
HERPUD2-206ENST00000438224 ANXA1P04083 346 aa11.19□□□□□ -0.62
HERPUD2-206ENST00000438224 HLFQ16534 295 aa11.19□□□□□ -0.62
HERPUD2-206ENST00000438224 PRR5LQ6MZQ0 368 aa11.19□□□□□ -0.62
HERPUD2-206ENST00000438224 TTLL7Q6ZT98 887 aa11.19□□□□□ -0.62
HERPUD2-206ENST00000438224 ZC3H15Q8WU90 426 aaKnown RBP11.19□□□□□ -0.62
HERPUD2-206ENST00000438224 BABAM1Q9NWV8 329 aa11.19□□□□□ -0.62
HERPUD2-206ENST00000438224 PODXL2Q9NZ53 605 aa11.19□□□□□ -0.62
HERPUD2-206ENST00000438224 ANP32CO43423 234 aa11.18□□□□□ -0.62
HERPUD2-206ENST00000438224 GRIN3BO60391 1043 aa11.18□□□□□ -0.62
HERPUD2-206ENST00000438224 ZNF853P0CG23 659 aa11.18□□□□□ -0.62
HERPUD2-206ENST00000438224 MYL6BP14649 208 aa11.18□□□□□ -0.62
HERPUD2-206ENST00000438224 NGEFQ8N5V2 710 aa11.18□□□□□ -0.62
HERPUD2-206ENST00000438224 ZNF784Q8NCA9 323 aaPredicted RBP11.18□□□□□ -0.62
HERPUD2-206ENST00000438224 MRS2Q9HD23 443 aa11.18□□□□□ -0.62
HERPUD2-206ENST00000438224 BCS1LQ9Y276 419 aa11.18□□□□□ -0.62
HERPUD2-206ENST00000438224 LAMB2P55268 1798 aa11.18□□□□□ -0.62
HERPUD2-206ENST00000438224 ADCY9O60503 1353 aa11.17□□□□□ -0.62
HERPUD2-206ENST00000438224 FER1L6Q2WGJ9 1857 aa11.17□□□□□ -0.62
HERPUD2-206ENST00000438224 NECTIN2Q92692 538 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms