RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 MPHOSPH8Q99549 860 aa25.95■■□□□ 1.74
TOP2B-204ENST00000435706 DACT1Q9NYF0 836 aa25.95■■□□□ 1.74
TOP2B-204ENST00000435706 RSPH14Q9UHP6 348 aa25.95■■□□□ 1.74
TOP2B-204ENST00000435706 DNAJC25Q9H1X3 360 aa25.94■■□□□ 1.74
TOP2B-204ENST00000435706 CCDC196A0A1B0GTZ2 297 aa25.94■■□□□ 1.74
TOP2B-204ENST00000435706 IFIT1P09914 478 aaKnown RBP25.94■■□□□ 1.74
TOP2B-204ENST00000435706 TUBB4AP04350 444 aa25.94■■□□□ 1.74
TOP2B-204ENST00000435706 FLIIQ13045 1269 aa25.94■■□□□ 1.74
TOP2B-204ENST00000435706 NECAB1Q8N987 351 aa25.94■■□□□ 1.74
TOP2B-204ENST00000435706 SRRTQ9BXP5 876 aaKnown RBP25.94■■□□□ 1.74
TOP2B-204ENST00000435706 MBIPQ9NS73 344 aa25.94■■□□□ 1.74
TOP2B-204ENST00000435706 UBASH3AP57075 661 aa25.93■■□□□ 1.74
TOP2B-204ENST00000435706 ESYT1Q9BSJ8 1104 aa25.93■■□□□ 1.74
TOP2B-204ENST00000435706 NAA15Q9BXJ9 866 aaKnown RBP25.93■■□□□ 1.74
TOP2B-204ENST00000435706 SPINK5Q9NQ38 1064 aaPredicted RBP25.93■■□□□ 1.74
TOP2B-204ENST00000435706 ALS2CR12Q96Q35 445 aa25.93■■□□□ 1.74
TOP2B-204ENST00000435706 PTGS1P23219 599 aa25.92■■□□□ 1.74
TOP2B-204ENST00000435706 GOLGA6L10A0A0M3HER8 536 aa25.92■■□□□ 1.74
TOP2B-204ENST00000435706 ATF3P18847 181 aa25.92■■□□□ 1.74
TOP2B-204ENST00000435706 MCM6Q14566 821 aa25.92■■□□□ 1.74
TOP2B-204ENST00000435706 NEK1Q96PY6 1258 aa25.92■■□□□ 1.74
TOP2B-204ENST00000435706 POLR3DP05423 398 aaPredicted RBP25.92■■□□□ 1.74
TOP2B-204ENST00000435706 DNM1Q05193 864 aaKnown RBP25.92■■□□□ 1.74
TOP2B-204ENST00000435706 HMG20BQ9P0W2 317 aa25.92■■□□□ 1.74
TOP2B-204ENST00000435706 SCAF11Q99590 1463 aaKnown RBP25.92■■□□□ 1.74
TOP2B-204ENST00000435706 CCDC175P0C221 793 aa25.92■■□□□ 1.74
TOP2B-204ENST00000435706 EMILIN1Q9Y6C2 1016 aa25.92■■□□□ 1.74
TOP2B-204ENST00000435706 ATP2B2Q01814 1243 aa25.92■■□□□ 1.74
TOP2B-204ENST00000435706 TYRO3Q06418 890 aa25.91■■□□□ 1.74
TOP2B-204ENST00000435706 HLTFQ14527 1009 aaKnown RBP eCLIP25.91■■□□□ 1.74
TOP2B-204ENST00000435706 CCDC102BQ68D86 513 aa25.91■■□□□ 1.74
TOP2B-204ENST00000435706 LARP1Q6PKG0 1096 aaKnown RBP25.91■■□□□ 1.74
TOP2B-204ENST00000435706 SMC1AQ14683 1233 aaKnown RBP25.91■■□□□ 1.74
TOP2B-204ENST00000435706 NSD2O96028 1365 aa25.91■■□□□ 1.74
TOP2B-204ENST00000435706 PDE1AP54750 535 aa25.9■■□□□ 1.74
TOP2B-204ENST00000435706 NUDT16Q96DE0 195 aaKnown RBP25.9■■□□□ 1.74
TOP2B-204ENST00000435706 GOPCQ9HD26 462 aa25.9■■□□□ 1.74
TOP2B-204ENST00000435706 PARD3Q8TEW0 1356 aa25.9■■□□□ 1.74
TOP2B-204ENST00000435706 SSRP1Q08945 709 aaKnown RBP25.9■■□□□ 1.74
TOP2B-204ENST00000435706 LRP2BPQ9P2M1 347 aa25.9■■□□□ 1.74
TOP2B-204ENST00000435706 AKAP2Q9Y2D5 859 aa25.9■■□□□ 1.74
TOP2B-204ENST00000435706 SPECC1Q5M775 1068 aa25.9■■□□□ 1.74
TOP2B-204ENST00000435706 CTAGE15A4D2H0 777 aa25.9■■□□□ 1.74
TOP2B-204ENST00000435706 ZNF213O14771 459 aa25.9■■□□□ 1.74
TOP2B-204ENST00000435706 CTAGE8P0CG41 777 aa25.9■■□□□ 1.74
TOP2B-204ENST00000435706 TDRD12Q587J7 1177 aaKnown RBP25.9■■□□□ 1.74
TOP2B-204ENST00000435706 CTAGE6Q86UF2 777 aa25.9■■□□□ 1.74
TOP2B-204ENST00000435706 CTAGE4Q8IX94 777 aa25.9■■□□□ 1.74
TOP2B-204ENST00000435706 SLC12A7Q9Y666 1083 aa25.9■■□□□ 1.74
TOP2B-204ENST00000435706 ZGPATQ8N5A5 531 aaKnown RBP25.89■■□□□ 1.74
TOP2B-204ENST00000435706 TSG101Q99816 390 aa25.89■■□□□ 1.74
TOP2B-204ENST00000435706 RBSNQ9H1K0 784 aa25.89■■□□□ 1.74
TOP2B-204ENST00000435706 CCDC61Q9Y6R9 512 aa25.89■■□□□ 1.74
TOP2B-204ENST00000435706 AOPEPQ8N6M6 819 aa25.89■■□□□ 1.74
TOP2B-204ENST00000435706 GOLGA8AA7E2F4 631 aa25.89■■□□□ 1.73
TOP2B-204ENST00000435706 USP16Q9Y5T5 823 aa25.89■■□□□ 1.73
TOP2B-204ENST00000435706 MAATS1Q7Z4T9 603 aa25.89■■□□□ 1.73
TOP2B-204ENST00000435706 JADE2Q9NQC1 790 aa25.89■■□□□ 1.73
TOP2B-204ENST00000435706 GCOM1H8Y6P7 765 aaPredicted RBP25.88■■□□□ 1.73
TOP2B-204ENST00000435706 MYZAPP0CAP1 466 aa25.88■■□□□ 1.73
TOP2B-204ENST00000435706 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.88■■□□□ 1.732e-6■□□□□ 8.9
TOP2B-204ENST00000435706 CCDC85AQ96PX6 553 aaPredicted RBP25.88■■□□□ 1.73
TOP2B-204ENST00000435706 ORC3Q9UBD5 711 aaPredicted RBP25.88■■□□□ 1.73
TOP2B-204ENST00000435706 CAPN2P17655 700 aa25.88■■□□□ 1.73
TOP2B-204ENST00000435706 VPS36Q86VN1 386 aa25.88■■□□□ 1.73
TOP2B-204ENST00000435706 CCDC82Q8N4S0 544 aa25.88■■□□□ 1.73
TOP2B-204ENST00000435706 EHBP1Q8NDI1 1231 aa25.87■■□□□ 1.73
TOP2B-204ENST00000435706 FGFR1OPO95684 399 aaKnown RBP25.87■■□□□ 1.73
TOP2B-204ENST00000435706 NAPBQ9H115 298 aa25.87■■□□□ 1.73
TOP2B-204ENST00000435706 PPP1R42Q7Z4L9 355 aa25.87■■□□□ 1.73
TOP2B-204ENST00000435706 SYT1P21579 422 aa25.86■■□□□ 1.73
TOP2B-204ENST00000435706 TNNQ9UQP3 1299 aa25.86■■□□□ 1.73
TOP2B-204ENST00000435706 RALGAPBQ86X10 1494 aa25.86■■□□□ 1.73
TOP2B-204ENST00000435706 HSF2BPO75031 334 aa25.86■■□□□ 1.73
TOP2B-204ENST00000435706 NME9Q86XW9 330 aa25.86■■□□□ 1.73
TOP2B-204ENST00000435706 RNF216Q9NWF9 866 aaPredicted RBP25.86■■□□□ 1.73
TOP2B-204ENST00000435706 KANK3Q6NY19 840 aa25.86■■□□□ 1.73
TOP2B-204ENST00000435706 ANKRD44Q8N8A2 993 aa25.86■■□□□ 1.73
TOP2B-204ENST00000435706 MATR3P43243 847 aaKnown RBP eCLIP25.86■■□□□ 1.731e-6■■■■□ 20.7
TOP2B-204ENST00000435706 SYKP43405 635 aa25.86■■□□□ 1.73
TOP2B-204ENST00000435706 METTL24Q5JXM2 366 aa25.86■■□□□ 1.73
TOP2B-204ENST00000435706 MYD88Q99836 296 aa25.86■■□□□ 1.73
TOP2B-204ENST00000435706 CKAP4Q07065 602 aaKnown RBP25.85■■□□□ 1.73
TOP2B-204ENST00000435706 MTIF2P46199 727 aaKnown RBP25.85■■□□□ 1.73
TOP2B-204ENST00000435706 GOLGA1Q92805 767 aa25.85■■□□□ 1.73
TOP2B-204ENST00000435706 PPFIA3O75145 1194 aa25.85■■□□□ 1.73
TOP2B-204ENST00000435706 RLBP1P12271 317 aa25.85■■□□□ 1.73
TOP2B-204ENST00000435706 TMEM132AQ24JP5 1023 aa25.85■■□□□ 1.73
TOP2B-204ENST00000435706 CCDC91Q7Z6B0 441 aa25.85■■□□□ 1.73
TOP2B-204ENST00000435706 MRPS27Q92552 414 aaKnown RBP25.85■■□□□ 1.73
TOP2B-204ENST00000435706 PPP1R12BO60237 982 aaPredicted RBP25.84■■□□□ 1.73
TOP2B-204ENST00000435706 CEP112Q8N8E3 955 aa25.83■■□□□ 1.73
TOP2B-204ENST00000435706 MEIS3Q99687 375 aa25.83■■□□□ 1.73
TOP2B-204ENST00000435706 NF2P35240 595 aa25.83■■□□□ 1.73
TOP2B-204ENST00000435706 TERF1P54274 439 aa25.83■■□□□ 1.73
TOP2B-204ENST00000435706 IARSP41252 1262 aaKnown RBP25.83■■□□□ 1.73
TOP2B-204ENST00000435706 BRF1Q92994 677 aa25.83■■□□□ 1.73
TOP2B-204ENST00000435706 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.83■■□□□ 1.73
TOP2B-204ENST00000435706 KIF20AO95235 890 aa25.83■■□□□ 1.73
TOP2B-204ENST00000435706 C16orf71Q8IYS4 520 aaPredicted RBP25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms