RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 EIF4A1P60842 406 aaKnown RBP19■□□□□ 0.63
LINC01006-204ENST00000435354 ZNF652Q9Y2D9 606 aa19■□□□□ 0.63
LINC01006-204ENST00000435354 TNRC6CQ9HCJ0 1690 aaKnown RBP19■□□□□ 0.63
LINC01006-204ENST00000435354 CACNA1SQ13698 1873 aa19■□□□□ 0.63
LINC01006-204ENST00000435354 FER1L6Q2WGJ9 1857 aa19■□□□□ 0.63
LINC01006-204ENST00000435354 KDM2BQ8NHM5 1336 aa19■□□□□ 0.63
LINC01006-204ENST00000435354 MAPK8IP3Q9UPT6 1336 aa19■□□□□ 0.63
LINC01006-204ENST00000435354 ARFGEF2Q9Y6D5 1785 aa18.99■□□□□ 0.63
LINC01006-204ENST00000435354 SRGNP10124 158 aa18.99■□□□□ 0.63
LINC01006-204ENST00000435354 ST5P78524 1137 aa18.99■□□□□ 0.63
LINC01006-204ENST00000435354 DDX10Q13206 875 aaKnown RBP18.99■□□□□ 0.63
LINC01006-204ENST00000435354 PNNQ9H307 717 aaKnown RBP18.99■□□□□ 0.63
LINC01006-204ENST00000435354 ZC3H4Q9UPT8 1303 aaKnown RBP18.99■□□□□ 0.63
LINC01006-204ENST00000435354 NPHP1O15259 732 aa18.98■□□□□ 0.63
LINC01006-204ENST00000435354 C21orf2O43822 256 aa18.98■□□□□ 0.63
LINC01006-204ENST00000435354 NBPF5PQ86XG9 351 aaPredicted RBP18.98■□□□□ 0.63
LINC01006-204ENST00000435354 HLFQ16534 295 aa18.97■□□□□ 0.63
LINC01006-204ENST00000435354 STYK1Q6J9G0 422 aa18.97■□□□□ 0.63
LINC01006-204ENST00000435354 ZNF219Q9P2Y4 722 aaPredicted RBP18.97■□□□□ 0.63
LINC01006-204ENST00000435354 NIP7Q9Y221 180 aaKnown RBP eCLIP18.97■□□□□ 0.63
LINC01006-204ENST00000435354 DICER1Q9UPY3 1922 aaKnown RBP18.96■□□□□ 0.63
LINC01006-204ENST00000435354 RBM46Q8TBY0 533 aaKnown RBP18.96■□□□□ 0.63
LINC01006-204ENST00000435354 RRAGCQ9HB90 399 aa18.96■□□□□ 0.63
LINC01006-204ENST00000435354 NUP98P52948 1817 aa18.95■□□□□ 0.62
LINC01006-204ENST00000435354 PRPF40BQ6NWY9 871 aaKnown RBP18.95■□□□□ 0.62
LINC01006-204ENST00000435354 CNKSR1Q969H4 720 aa18.95■□□□□ 0.62
LINC01006-204ENST00000435354 MASTLQ96GX5 879 aa18.95■□□□□ 0.62
LINC01006-204ENST00000435354 MYBBP1AQ9BQG0 1328 aaKnown RBP18.95■□□□□ 0.62
LINC01006-204ENST00000435354 RIPK4P57078 832 aa18.94■□□□□ 0.62
LINC01006-204ENST00000435354 NGEFQ8N5V2 710 aa18.94■□□□□ 0.62
LINC01006-204ENST00000435354 KLRG2A4D1S0 409 aaPredicted RBP18.93■□□□□ 0.62
LINC01006-204ENST00000435354 GLTPD2A6NH11 291 aa18.93■□□□□ 0.62
LINC01006-204ENST00000435354 FAM177BA6PVY3 158 aa18.93■□□□□ 0.62
LINC01006-204ENST00000435354 TMPOP42166 694 aaKnown RBP18.93■□□□□ 0.62
LINC01006-204ENST00000435354 TPTE2Q6XPS3 522 aa18.93■□□□□ 0.62
LINC01006-204ENST00000435354 TTLL7Q6ZT98 887 aa18.93■□□□□ 0.62
LINC01006-204ENST00000435354 C16orf71Q8IYS4 520 aaPredicted RBP18.93■□□□□ 0.62
LINC01006-204ENST00000435354 RRP7AQ9Y3A4 280 aaKnown RBP18.93■□□□□ 0.62
LINC01006-204ENST00000435354 LTBP3Q9NS15 1303 aa18.93■□□□□ 0.62
LINC01006-204ENST00000435354 ERVV-1B6SEH8 477 aa18.92■□□□□ 0.62
LINC01006-204ENST00000435354 APLP1P51693 650 aa18.92■□□□□ 0.62
LINC01006-204ENST00000435354 C7orf43Q8WVR3 580 aa18.92■□□□□ 0.62
LINC01006-204ENST00000435354 MAP3K15Q6ZN16 1313 aa18.92■□□□□ 0.62
LINC01006-204ENST00000435354 MYL6BP14649 208 aa18.91■□□□□ 0.62
LINC01006-204ENST00000435354 TAOK3Q9H2K8 898 aa18.91■□□□□ 0.62
LINC01006-204ENST00000435354 TSPYL4Q9UJ04 414 aa18.91■□□□□ 0.62
LINC01006-204ENST00000435354 ABCC12Q96J65 1359 aa18.91■□□□□ 0.62
LINC01006-204ENST00000435354 NPR1P16066 1061 aa18.9■□□□□ 0.62
LINC01006-204ENST00000435354 FSTL1Q12841 308 aa18.9■□□□□ 0.62
LINC01006-204ENST00000435354 CCDC146Q8IYE0 955 aa18.9■□□□□ 0.62
LINC01006-204ENST00000435354 WDR90Q96KV7 1748 aa18.89■□□□□ 0.61
LINC01006-204ENST00000435354 ERFEQ4G0M1 354 aa18.89■□□□□ 0.61
LINC01006-204ENST00000435354 SOGA3Q5TF21 947 aa18.89■□□□□ 0.61
LINC01006-204ENST00000435354 KIF6Q6ZMV9 814 aa18.89■□□□□ 0.61
LINC01006-204ENST00000435354 LRP10Q7Z4F1 713 aa18.89■□□□□ 0.61
LINC01006-204ENST00000435354 ZBTB3Q9H5J0 574 aa18.89■□□□□ 0.61
LINC01006-204ENST00000435354 ERBB4Q15303 1308 aa18.89■□□□□ 0.61
LINC01006-204ENST00000435354 VEGFAP15692 232 aaPredicted RBP18.88■□□□□ 0.61
LINC01006-204ENST00000435354 LMOD3Q0VAK6 560 aa18.88■□□□□ 0.61
LINC01006-204ENST00000435354 PDIA6Q15084 440 aa18.88■□□□□ 0.61
LINC01006-204ENST00000435354 DNAJC5GQ8N7S2 189 aa18.88■□□□□ 0.61
LINC01006-204ENST00000435354 BABAM1Q9NWV8 329 aa18.88■□□□□ 0.61
LINC01006-204ENST00000435354 UBN2Q6ZU65 1347 aa18.88■□□□□ 0.61
LINC01006-204ENST00000435354 POTECB2RU33 542 aa18.87■□□□□ 0.61
LINC01006-204ENST00000435354 OLFM4Q6UX06 510 aa18.87■□□□□ 0.61
LINC01006-204ENST00000435354 NUTM1Q86Y26 1132 aa18.87■□□□□ 0.61
LINC01006-204ENST00000435354 IBTKQ9P2D0 1353 aaPredicted RBP18.86■□□□□ 0.61
LINC01006-204ENST00000435354 GPTP24298 496 aa18.86■□□□□ 0.61
LINC01006-204ENST00000435354 NEUROD2Q15784 382 aa18.86■□□□□ 0.61
LINC01006-204ENST00000435354 PROSER3Q2NL68 480 aa18.86■□□□□ 0.61
LINC01006-204ENST00000435354 CRY2Q49AN0 593 aa18.86■□□□□ 0.61
LINC01006-204ENST00000435354 CCDC93Q567U6 631 aa18.86■□□□□ 0.61
LINC01006-204ENST00000435354 NYXQ9GZU5 481 aa18.86■□□□□ 0.61
LINC01006-204ENST00000435354 TRIM35Q9UPQ4 493 aa18.86■□□□□ 0.61
LINC01006-204ENST00000435354 EIF2S2P20042 333 aaKnown RBP18.85■□□□□ 0.61
LINC01006-204ENST00000435354 GTF2E1P29083 439 aaPredicted RBP18.85■□□□□ 0.61
LINC01006-204ENST00000435354 HTRA3P83110 453 aa18.85■□□□□ 0.61
LINC01006-204ENST00000435354 SUSD4Q5VX71 490 aa18.85■□□□□ 0.61
LINC01006-204ENST00000435354 ZNF34Q8IZ26 560 aa18.85■□□□□ 0.61
LINC01006-204ENST00000435354 SMC1BQ8NDV3 1235 aa18.85■□□□□ 0.61
LINC01006-204ENST00000435354 RUNDC1Q96C34 613 aa18.85■□□□□ 0.61
LINC01006-204ENST00000435354 RIC1Q4ADV7 1423 aa18.84■□□□□ 0.61
LINC01006-204ENST00000435354 ANXA1P04083 346 aa18.84■□□□□ 0.61
LINC01006-204ENST00000435354 WDR43Q15061 677 aaKnown RBP eCLIP18.84■□□□□ 0.61
LINC01006-204ENST00000435354 DPY19L2Q6NUT2 758 aa18.84■□□□□ 0.61
LINC01006-204ENST00000435354 GIGYF2Q6Y7W6 1299 aaKnown RBP18.84■□□□□ 0.61
LINC01006-204ENST00000435354 PRKRIP1Q9H875 184 aaPredicted RBP18.84■□□□□ 0.61
LINC01006-204ENST00000435354 ADAMTS8Q9UP79 889 aa18.84■□□□□ 0.61
LINC01006-204ENST00000435354 SNED1Q8TER0 1413 aa18.83■□□□□ 0.61
LINC01006-204ENST00000435354 CHL1O00533 1208 aa18.83■□□□□ 0.6
LINC01006-204ENST00000435354 NTSR2O95665 410 aa18.83■□□□□ 0.6
LINC01006-204ENST00000435354 FKBP4Q02790 459 aaKnown RBP eCLIP18.83■□□□□ 0.6
LINC01006-204ENST00000435354 KRT24Q2M2I5 525 aa18.83■□□□□ 0.6
LINC01006-204ENST00000435354 ALDH1B1P30837 517 aa18.82■□□□□ 0.6
LINC01006-204ENST00000435354 ZNF277Q9NRM2 450 aaPredicted RBP18.82■□□□□ 0.6
LINC01006-204ENST00000435354 ANKRD36CQ5JPF3 1778 aa18.81■□□□□ 0.6
LINC01006-204ENST00000435354 DDNO94850 711 aaPredicted RBP18.81■□□□□ 0.6
LINC01006-204ENST00000435354 HOXA10P31260 410 aaPredicted RBP18.81■□□□□ 0.6
LINC01006-204ENST00000435354 C3orf67Q6ZVT6 689 aa18.81■□□□□ 0.6
LINC01006-204ENST00000435354 NECTIN2Q92692 538 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms