RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 DDX21Q9NR30 783 aaKnown RBP eCLIP19.99■□□□□ 0.79
TREX1-201ENST00000433541 CAMTA2O94983 1202 aa19.98■□□□□ 0.79
TREX1-201ENST00000433541 AFDNP55196 1824 aaKnown RBP19.97■□□□□ 0.79
TREX1-201ENST00000433541 TCERG1O14776 1098 aaKnown RBP19.97■□□□□ 0.79
TREX1-201ENST00000433541 TTLL7Q6ZT98 887 aa19.97■□□□□ 0.79
TREX1-201ENST00000433541 HYPKQ9NX55 129 aa19.97■□□□□ 0.79
TREX1-201ENST00000433541 CACNA1FO60840 1977 aa19.97■□□□□ 0.79
TREX1-201ENST00000433541 NFIXQ14938 502 aa19.96■□□□□ 0.79
TREX1-201ENST00000433541 PDIA6Q15084 440 aa19.96■□□□□ 0.79
TREX1-201ENST00000433541 TBC1D9BQ66K14 1250 aa19.96■□□□□ 0.79
TREX1-201ENST00000433541 COPS6Q7L5N1 327 aa19.96■□□□□ 0.79
TREX1-201ENST00000433541 XAGE3Q8WTP9 111 aa19.96■□□□□ 0.79
TREX1-201ENST00000433541 BCL2L12Q9HB09 334 aa19.96■□□□□ 0.79
TREX1-201ENST00000433541 MAP3K15Q6ZN16 1313 aa19.96■□□□□ 0.79
TREX1-201ENST00000433541 CDCA7LQ96GN5 454 aa19.95■□□□□ 0.78
TREX1-201ENST00000433541 SETDB2Q96T68 719 aa19.95■□□□□ 0.78
TREX1-201ENST00000433541 FAM177BA6PVY3 158 aa19.93■□□□□ 0.78
TREX1-201ENST00000433541 POLRMTO00411 1230 aaKnown RBP19.93■□□□□ 0.78
TREX1-201ENST00000433541 DDR1Q08345 913 aa19.93■□□□□ 0.78
TREX1-201ENST00000433541 SLFN5Q08AF3 891 aa19.93■□□□□ 0.78
TREX1-201ENST00000433541 CLEC4GQ6UXB4 293 aa19.93■□□□□ 0.78
TREX1-201ENST00000433541 NIP7Q9Y221 180 aaKnown RBP eCLIP19.93■□□□□ 0.78
TREX1-201ENST00000433541 CARMIL3Q8ND23 1372 aa19.93■□□□□ 0.78
TREX1-201ENST00000433541 ANKRD36CQ5JPF3 1778 aa19.93■□□□□ 0.78
TREX1-201ENST00000433541 ERVV-1B6SEH8 477 aa19.92■□□□□ 0.78
TREX1-201ENST00000433541 SERPINB2P05120 415 aa19.92■□□□□ 0.78
TREX1-201ENST00000433541 TM4SF1P30408 202 aa19.92■□□□□ 0.78
TREX1-201ENST00000433541 HLFQ16534 295 aa19.92■□□□□ 0.78
TREX1-201ENST00000433541 SYT17Q9BSW7 474 aa19.92■□□□□ 0.78
TREX1-201ENST00000433541 ARFGEF2Q9Y6D5 1785 aa19.92■□□□□ 0.78
TREX1-201ENST00000433541 DCAF8L1A6NGE4 600 aa19.9■□□□□ 0.78
TREX1-201ENST00000433541 DDX58O95786 925 aaKnown RBP19.9■□□□□ 0.78
TREX1-201ENST00000433541 SLC4A2P04920 1241 aa19.9■□□□□ 0.78
TREX1-201ENST00000433541 GPTP24298 496 aa19.9■□□□□ 0.78
TREX1-201ENST00000433541 GTF2E1P29083 439 aaPredicted RBP19.9■□□□□ 0.78
TREX1-201ENST00000433541 RIC3Q7Z5B4 369 aa19.9■□□□□ 0.78
TREX1-201ENST00000433541 NBPF5PQ86XG9 351 aaPredicted RBP19.9■□□□□ 0.78
TREX1-201ENST00000433541 PELP1Q8IZL8 1130 aaKnown RBP19.9■□□□□ 0.78
TREX1-201ENST00000433541 PHAXQ9H814 394 aaKnown RBP19.9■□□□□ 0.78
TREX1-201ENST00000433541 N4BP2Q86UW6 1770 aaPredicted RBP19.9■□□□□ 0.78
TREX1-201ENST00000433541 VAMP4O75379 141 aa19.89■□□□□ 0.77
TREX1-201ENST00000433541 GIGYF2Q6Y7W6 1299 aaKnown RBP19.89■□□□□ 0.77
TREX1-201ENST00000433541 ANKRD13DQ6ZTN6 518 aa19.89■□□□□ 0.77
TREX1-201ENST00000433541 LRP10Q7Z4F1 713 aa19.89■□□□□ 0.77
TREX1-201ENST00000433541 CNBD1Q8NA66 436 aa19.89■□□□□ 0.77
TREX1-201ENST00000433541 KIF13BQ9NQT8 1826 aa19.89■□□□□ 0.77
TREX1-201ENST00000433541 CD2APQ9Y5K6 639 aa19.89■□□□□ 0.77
TREX1-201ENST00000433541 RGL2O15211 777 aa19.88■□□□□ 0.77
TREX1-201ENST00000433541 HSP90AB3PQ58FF7 597 aa19.88■□□□□ 0.77
TREX1-201ENST00000433541 NLGN2Q8NFZ4 835 aa19.88■□□□□ 0.77
TREX1-201ENST00000433541 PLBD2Q8NHP8 589 aa19.88■□□□□ 0.77
TREX1-201ENST00000433541 NRXN2Q9P2S2 1712 aa19.88■□□□□ 0.77
TREX1-201ENST00000433541 C10orf71Q711Q0 1435 aa19.87■□□□□ 0.77
TREX1-201ENST00000433541 ZBED9Q6R2W3 1325 aa19.87■□□□□ 0.77
TREX1-201ENST00000433541 ST5P78524 1137 aa19.87■□□□□ 0.77
TREX1-201ENST00000433541 ATP10DQ9P241 1426 aa19.86■□□□□ 0.77
TREX1-201ENST00000433541 CCDC24Q8N4L8 307 aa19.86■□□□□ 0.77
TREX1-201ENST00000433541 WWC3Q9ULE0 1092 aa19.86■□□□□ 0.77
TREX1-201ENST00000433541 FKBP5Q13451 457 aaPredicted RBP19.85■□□□□ 0.77
TREX1-201ENST00000433541 TPTE2Q6XPS3 522 aa19.85■□□□□ 0.77
TREX1-201ENST00000433541 NYXQ9GZU5 481 aa19.85■□□□□ 0.77
TREX1-201ENST00000433541 PPP1R42Q7Z4L9 355 aa19.84■□□□□ 0.77
TREX1-201ENST00000433541 FLIIQ13045 1269 aa19.83■□□□□ 0.77
TREX1-201ENST00000433541 TCIRG1Q13488 830 aa19.83■□□□□ 0.77
TREX1-201ENST00000433541 PARP10Q53GL7 1025 aa19.83■□□□□ 0.77
TREX1-201ENST00000433541 PRR5LQ6MZQ0 368 aa19.83■□□□□ 0.77
TREX1-201ENST00000433541 ZNF428Q96B54 188 aa19.83■□□□□ 0.77
TREX1-201ENST00000433541 YTHDC1Q96MU7 727 aaKnown RBP19.83■□□□□ 0.77
TREX1-201ENST00000433541 ANKRD31Q8N7Z5 1873 aa19.83■□□□□ 0.76
TREX1-201ENST00000433541 UBN2Q6ZU65 1347 aa19.82■□□□□ 0.76
TREX1-201ENST00000433541 CACNA1SQ13698 1873 aa19.82■□□□□ 0.76
TREX1-201ENST00000433541 A0A0G2JLW4 131 aa19.82■□□□□ 0.76
TREX1-201ENST00000433541 GPR162Q16538 588 aa19.82■□□□□ 0.76
TREX1-201ENST00000433541 G2E3Q7L622 706 aa19.82■□□□□ 0.76
TREX1-201ENST00000433541 MYD88Q99836 296 aa19.82■□□□□ 0.76
TREX1-201ENST00000433541 BCL2L13Q9BXK5 485 aa19.82■□□□□ 0.76
TREX1-201ENST00000433541 MAP3K2Q9Y2U5 619 aa19.82■□□□□ 0.76
TREX1-201ENST00000433541 PI4KAP2A4QPH2 592 aa19.81■□□□□ 0.76
TREX1-201ENST00000433541 ATP5J2-PTCD1G3V325 749 aa19.81■□□□□ 0.76
TREX1-201ENST00000433541 TGFB2P61812 414 aa19.81■□□□□ 0.76
TREX1-201ENST00000433541 NEXNQ0ZGT2 675 aa19.81■□□□□ 0.76
TREX1-201ENST00000433541 ZNF34Q8IZ26 560 aa19.81■□□□□ 0.76
TREX1-201ENST00000433541 TRMT2AQ8IZ69 625 aaKnown RBP19.81■□□□□ 0.76
TREX1-201ENST00000433541 PI4KAP1Q8N8J0 262 aa19.81■□□□□ 0.76
TREX1-201ENST00000433541 SMC4Q9NTJ3 1288 aa19.81■□□□□ 0.76
TREX1-201ENST00000433541 PXDNLA1KZ92 1463 aa19.8■□□□□ 0.76
TREX1-201ENST00000433541 PDE6BP35913 854 aa19.8■□□□□ 0.76
TREX1-201ENST00000433541 SUSD4Q5VX71 490 aa19.8■□□□□ 0.76
TREX1-201ENST00000433541 KSR2Q6VAB6 950 aa19.8■□□□□ 0.76
TREX1-201ENST00000433541 NUTM1Q86Y26 1132 aa19.8■□□□□ 0.76
TREX1-201ENST00000433541 UTP14AQ9BVJ6 771 aaKnown RBP19.8■□□□□ 0.76
TREX1-201ENST00000433541 KIAA1551Q9HCM1 1747 aa19.79■□□□□ 0.76
TREX1-201ENST00000433541 H0YIN7 160 aa19.79■□□□□ 0.76
TREX1-201ENST00000433541 CT47B1P0C2W7 299 aaPredicted RBP19.79■□□□□ 0.76
TREX1-201ENST00000433541 DPEP1P16444 411 aa19.79■□□□□ 0.76
TREX1-201ENST00000433541 CHRNA5P30532 468 aa19.79■□□□□ 0.76
TREX1-201ENST00000433541 C2CD5Q86YS7 1000 aa19.79■□□□□ 0.76
TREX1-201ENST00000433541 BRIP1Q9BX63 1249 aa19.79■□□□□ 0.76
TREX1-201ENST00000433541 TRMT112Q9UI30 125 aaKnown RBP19.79■□□□□ 0.76
TREX1-201ENST00000433541 NLRP10Q86W26 655 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms