RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 STAG2Q8N3U4 1231 aa12.76□□□□□ -0.37
CCDC171-202ENST00000432954 GAS2L2Q8NHY3 880 aa12.76□□□□□ -0.37
CCDC171-202ENST00000432954 ERO1AQ96HE7 468 aa12.76□□□□□ -0.37
CCDC171-202ENST00000432954 THUMPD2Q9BTF0 503 aaKnown RBP12.76□□□□□ -0.37
CCDC171-202ENST00000432954 CLIP2Q9UDT6 1046 aa12.76□□□□□ -0.37
CCDC171-202ENST00000432954 CCDC7Q96M83 1385 aa12.75□□□□□ -0.37
CCDC171-202ENST00000432954 SETD5Q9C0A6 1442 aa12.75□□□□□ -0.37
CCDC171-202ENST00000432954 F8VZ95 297 aa12.75□□□□□ -0.37
CCDC171-202ENST00000432954 RTN3O95197 1032 aaPredicted RBP12.75□□□□□ -0.37
CCDC171-202ENST00000432954 NBPF7P0C2Y1 421 aaPredicted RBP12.75□□□□□ -0.37
CCDC171-202ENST00000432954 GJA8P48165 433 aa12.75□□□□□ -0.37
CCDC171-202ENST00000432954 NBPF8Q3BBV2 869 aa12.75□□□□□ -0.37
CCDC171-202ENST00000432954 PARD3BQ8TEW8 1205 aa12.75□□□□□ -0.37
CCDC171-202ENST00000432954 RBM17Q96I25 401 aaKnown RBP12.75□□□□□ -0.37
CCDC171-202ENST00000432954 A0A1B0GUA9 196 aa12.74□□□□□ -0.37
CCDC171-202ENST00000432954 NAA30Q147X3 362 aaPredicted RBP12.74□□□□□ -0.37
CCDC171-202ENST00000432954 IQCB1Q15051 598 aa12.74□□□□□ -0.37
CCDC171-202ENST00000432954 CDC37L1Q7L3B6 337 aa12.74□□□□□ -0.37
CCDC171-202ENST00000432954 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.74□□□□□ -0.37
CCDC171-202ENST00000432954 EZH1Q92800 747 aaPredicted RBP12.74□□□□□ -0.37
CCDC171-202ENST00000432954 TMEM98Q9Y2Y6 226 aa12.74□□□□□ -0.37
CCDC171-202ENST00000432954 ZBED6P86452 979 aa12.74□□□□□ -0.37
CCDC171-202ENST00000432954 PRPF4BQ13523 1007 aaKnown RBP12.74□□□□□ -0.37
CCDC171-202ENST00000432954 PREPLQ4J6C6 727 aaPredicted RBP12.74□□□□□ -0.37
CCDC171-202ENST00000432954 WDR63Q8IWG1 891 aa12.74□□□□□ -0.37
CCDC171-202ENST00000432954 MTUS2Q5JR59 1369 aa12.74□□□□□ -0.37
CCDC171-202ENST00000432954 SLC27A2O14975 620 aa12.73□□□□□ -0.37
CCDC171-202ENST00000432954 SESN3P58005 492 aa12.73□□□□□ -0.37
CCDC171-202ENST00000432954 SNX1Q13596 522 aa12.73□□□□□ -0.37
CCDC171-202ENST00000432954 CLEC4GQ6UXB4 293 aa12.73□□□□□ -0.37
CCDC171-202ENST00000432954 ROCK1Q13464 1354 aa12.73□□□□□ -0.37
CCDC171-202ENST00000432954 SASH1O94885 1247 aa12.73□□□□□ -0.37
CCDC171-202ENST00000432954 GCKP35557 465 aa12.73□□□□□ -0.37
CCDC171-202ENST00000432954 SLC7A5Q01650 507 aa12.73□□□□□ -0.37
CCDC171-202ENST00000432954 SCRN1Q12765 414 aa12.73□□□□□ -0.37
CCDC171-202ENST00000432954 CDCA2Q69YH5 1023 aaPredicted RBP12.73□□□□□ -0.37
CCDC171-202ENST00000432954 SDCCAG8Q86SQ7 713 aaPredicted RBP12.73□□□□□ -0.37
CCDC171-202ENST00000432954 SPATA7Q9P0W8 599 aa12.73□□□□□ -0.37
CCDC171-202ENST00000432954 PNMA2Q9UL42 364 aa12.73□□□□□ -0.37
CCDC171-202ENST00000432954 U2AF1L5P0DN76 240 aaPredicted RBP12.72□□□□□ -0.37
CCDC171-202ENST00000432954 U2AF1Q01081 240 aaKnown RBP eCLIP12.72□□□□□ -0.37
CCDC171-202ENST00000432954 PKN1Q16512 942 aa12.72□□□□□ -0.37
CCDC171-202ENST00000432954 ZFYVE27Q5T4F4 411 aa12.72□□□□□ -0.37
CCDC171-202ENST00000432954 HDAC7Q8WUI4 952 aa12.72□□□□□ -0.37
CCDC171-202ENST00000432954 TRAIPQ9BWF2 469 aa12.72□□□□□ -0.37
CCDC171-202ENST00000432954 LMBRD1Q9NUN5 540 aa12.72□□□□□ -0.37
CCDC171-202ENST00000432954 MAGEC2Q9UBF1 373 aaPredicted RBP12.72□□□□□ -0.37
CCDC171-202ENST00000432954 IQSEC3Q9UPP2 1182 aaPredicted RBP12.72□□□□□ -0.37
CCDC171-202ENST00000432954 TONSLQ96HA7 1378 aa12.72□□□□□ -0.37
CCDC171-202ENST00000432954 CCDC175P0C221 793 aa12.71□□□□□ -0.37
CCDC171-202ENST00000432954 STIP1P31948 543 aaKnown RBP12.71□□□□□ -0.37
CCDC171-202ENST00000432954 AKNAD1Q5T1N1 836 aa12.71□□□□□ -0.37
CCDC171-202ENST00000432954 ANKRD13AQ8IZ07 590 aa12.71□□□□□ -0.37
CCDC171-202ENST00000432954 AGBL1Q96MI9 1066 aa12.71□□□□□ -0.37
CCDC171-202ENST00000432954 NAT2P11245 290 aa12.71□□□□□ -0.37
CCDC171-202ENST00000432954 INF2Q27J81 1249 aa12.71□□□□□ -0.37
CCDC171-202ENST00000432954 KIAA1328Q86T90 577 aa12.71□□□□□ -0.37
CCDC171-202ENST00000432954 MYOCDQ8IZQ8 938 aa12.71□□□□□ -0.37
CCDC171-202ENST00000432954 KIF9Q9HAQ2 790 aa12.71□□□□□ -0.37
CCDC171-202ENST00000432954 STK24Q9Y6E0 443 aa12.71□□□□□ -0.37
CCDC171-202ENST00000432954 EIF3AQ14152 1382 aaKnown RBP12.71□□□□□ -0.37
CCDC171-202ENST00000432954 YEATS2Q9ULM3 1422 aa12.71□□□□□ -0.37
CCDC171-202ENST00000432954 KDM5BQ9UGL1 1544 aa12.7□□□□□ -0.38
CCDC171-202ENST00000432954 CCNB3Q8WWL7 1395 aa12.7□□□□□ -0.38
CCDC171-202ENST00000432954 PLIN1O60240 522 aa12.7□□□□□ -0.38
CCDC171-202ENST00000432954 SMARCA5O60264 1052 aaPredicted RBP12.7□□□□□ -0.38
CCDC171-202ENST00000432954 IGHDP01880 384 aa12.7□□□□□ -0.38
CCDC171-202ENST00000432954 XBP1P17861 261 aa12.7□□□□□ -0.38
CCDC171-202ENST00000432954 ZNF394Q53GI3 561 aa12.7□□□□□ -0.38
CCDC171-202ENST00000432954 GJC2Q5T442 439 aaPredicted RBP12.7□□□□□ -0.38
CCDC171-202ENST00000432954 DDX11Q96FC9 970 aa12.7□□□□□ -0.38
CCDC171-202ENST00000432954 DHRS1Q96LJ7 313 aa12.7□□□□□ -0.38
CCDC171-202ENST00000432954 CCDC85AQ96PX6 553 aaPredicted RBP12.7□□□□□ -0.38
CCDC171-202ENST00000432954 SLC4A1APQ9BWU0 796 aaKnown RBP12.7□□□□□ -0.38
CCDC171-202ENST00000432954 PICK1Q9NRD5 415 aa12.7□□□□□ -0.38
CCDC171-202ENST00000432954 PDRG1Q9NUG6 133 aa12.7□□□□□ -0.38
CCDC171-202ENST00000432954 PUF60Q9UHX1 559 aaKnown RBP12.7□□□□□ -0.38
CCDC171-202ENST00000432954 TPPPO94811 219 aa12.7□□□□□ -0.38
CCDC171-202ENST00000432954 E2F5Q15329 346 aa12.7□□□□□ -0.38
CCDC171-202ENST00000432954 WLSQ5T9L3 541 aa12.7□□□□□ -0.38
CCDC171-202ENST00000432954 ARL10Q8N8L6 244 aa12.7□□□□□ -0.38
CCDC171-202ENST00000432954 KCNN1Q92952 543 aa12.7□□□□□ -0.38
CCDC171-202ENST00000432954 JPH2Q9BR39 696 aaPredicted RBP12.7□□□□□ -0.38
CCDC171-202ENST00000432954 UTP14AQ9BVJ6 771 aaKnown RBP12.7□□□□□ -0.38
CCDC171-202ENST00000432954 RABL2BQ9UNT1 228 aa12.7□□□□□ -0.38
CCDC171-202ENST00000432954 EXOC6BQ9Y2D4 811 aa12.7□□□□□ -0.38
CCDC171-202ENST00000432954 POLR3GO15318 223 aaPredicted RBP12.69□□□□□ -0.38
CCDC171-202ENST00000432954 ERLIN2O94905 339 aa12.69□□□□□ -0.38
CCDC171-202ENST00000432954 MCCD1P59942 119 aaPredicted RBP12.69□□□□□ -0.38
CCDC171-202ENST00000432954 LAMB3Q13751 1172 aa12.69□□□□□ -0.38
CCDC171-202ENST00000432954 SYNE3Q6ZMZ3 975 aa12.69□□□□□ -0.38
CCDC171-202ENST00000432954 ANKRD13BQ86YJ7 626 aa12.69□□□□□ -0.38
CCDC171-202ENST00000432954 NEK9Q8TD19 979 aa12.69□□□□□ -0.38
CCDC171-202ENST00000432954 KAT2BQ92831 832 aa12.69□□□□□ -0.38
CCDC171-202ENST00000432954 BHMTQ93088 406 aa12.69□□□□□ -0.38
CCDC171-202ENST00000432954 TSPY26PQ9H489 355 aa12.69□□□□□ -0.38
CCDC171-202ENST00000432954 PYCARDQ9ULZ3 195 aa12.69□□□□□ -0.38
CCDC171-202ENST00000432954 ANKRD36BQ8N2N9 1353 aa12.69□□□□□ -0.38
CCDC171-202ENST00000432954 CWC27Q6UX04 472 aaKnown RBP12.69□□□□□ -0.38
CCDC171-202ENST00000432954 FAM81AQ8TBF8 368 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms