RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 FER1L6Q2WGJ9 1857 aa16.46■□□□□ 0.23
SMPD4-204ENST00000430682 MYL6BP14649 208 aa16.46■□□□□ 0.23
SMPD4-204ENST00000430682 PRELPP51888 382 aa16.46■□□□□ 0.23
SMPD4-204ENST00000430682 PDIA6Q15084 440 aa16.46■□□□□ 0.23
SMPD4-204ENST00000430682 LRP10Q7Z4F1 713 aa16.46■□□□□ 0.23
SMPD4-204ENST00000430682 ZNF526Q8TF50 670 aaPredicted RBP16.46■□□□□ 0.23
SMPD4-204ENST00000430682 ZNF316A6NFI3 1004 aaPredicted RBP16.45■□□□□ 0.22
SMPD4-204ENST00000430682 CHL1O00533 1208 aa16.45■□□□□ 0.22
SMPD4-204ENST00000430682 ANXA1P04083 346 aa16.45■□□□□ 0.22
SMPD4-204ENST00000430682 PROSER3Q2NL68 480 aa16.45■□□□□ 0.22
SMPD4-204ENST00000430682 CLEC4GQ6UXB4 293 aa16.45■□□□□ 0.22
SMPD4-204ENST00000430682 NPM2Q86SE8 214 aaKnown RBP16.45■□□□□ 0.22
SMPD4-204ENST00000430682 TNRC6CQ9HCJ0 1690 aaKnown RBP16.45■□□□□ 0.22
SMPD4-204ENST00000430682 BRIP1Q9BX63 1249 aa16.44■□□□□ 0.22
SMPD4-204ENST00000430682 SENP3-EIF4A1A0A087X0R7 540 aa16.43■□□□□ 0.22
SMPD4-204ENST00000430682 FAM177BA6PVY3 158 aa16.43■□□□□ 0.22
SMPD4-204ENST00000430682 H0YIN7 160 aa16.43■□□□□ 0.22
SMPD4-204ENST00000430682 APAF1O14727 1248 aa16.43■□□□□ 0.22
SMPD4-204ENST00000430682 RASSF7Q02833 373 aa16.43■□□□□ 0.22
SMPD4-204ENST00000430682 LMOD3Q0VAK6 560 aa16.43■□□□□ 0.22
SMPD4-204ENST00000430682 CNBD1Q8NA66 436 aa16.43■□□□□ 0.22
SMPD4-204ENST00000430682 BABAM1Q9NWV8 329 aa16.43■□□□□ 0.22
SMPD4-204ENST00000430682 NIP7Q9Y221 180 aaKnown RBP eCLIP16.43■□□□□ 0.22
SMPD4-204ENST00000430682 ANKRD36CQ5JPF3 1778 aa16.43■□□□□ 0.22
SMPD4-204ENST00000430682 DICER1Q9UPY3 1922 aaKnown RBP16.43■□□□□ 0.22
SMPD4-204ENST00000430682 EIF2S2P20042 333 aaKnown RBP16.42■□□□□ 0.22
SMPD4-204ENST00000430682 C1QTNF8P60827 252 aa16.42■□□□□ 0.22
SMPD4-204ENST00000430682 C9orf131Q5VYM1 1079 aa16.42■□□□□ 0.22
SMPD4-204ENST00000430682 TTLL6Q8N841 843 aa16.42■□□□□ 0.22
SMPD4-204ENST00000430682 NECTIN2Q92692 538 aa16.42■□□□□ 0.22
SMPD4-204ENST00000430682 MAP3K15Q6ZN16 1313 aa16.42■□□□□ 0.22
SMPD4-204ENST00000430682 NBPF5PQ86XG9 351 aaPredicted RBP16.41■□□□□ 0.22
SMPD4-204ENST00000430682 ZBTB3Q9H5J0 574 aa16.41■□□□□ 0.22
SMPD4-204ENST00000430682 LAS1LQ9Y4W2 734 aaKnown RBP16.41■□□□□ 0.22
SMPD4-204ENST00000430682 TIAM2Q8IVF5 1701 aa16.4■□□□□ 0.22
SMPD4-204ENST00000430682 RGL2O15211 777 aa16.4■□□□□ 0.22
SMPD4-204ENST00000430682 SRGNP10124 158 aa16.4■□□□□ 0.22
SMPD4-204ENST00000430682 PDE6BP35913 854 aa16.4■□□□□ 0.22
SMPD4-204ENST00000430682 ZNF622Q969S3 477 aaKnown RBP eCLIP16.4■□□□□ 0.22
SMPD4-204ENST00000430682 GPBP1L1Q9HC44 474 aaPredicted RBP16.4■□□□□ 0.22
SMPD4-204ENST00000430682 ZNF219Q9P2Y4 722 aaPredicted RBP16.4■□□□□ 0.22
SMPD4-204ENST00000430682 ZNF652Q9Y2D9 606 aa16.4■□□□□ 0.22
SMPD4-204ENST00000430682 UBN2Q6ZU65 1347 aa16.4■□□□□ 0.22
SMPD4-204ENST00000430682 ERVV-1B6SEH8 477 aa16.39■□□□□ 0.21
SMPD4-204ENST00000430682 NFKBIEO00221 500 aa16.39■□□□□ 0.21
SMPD4-204ENST00000430682 ERBB4Q15303 1308 aa16.39■□□□□ 0.21
SMPD4-204ENST00000430682 ABCC12Q96J65 1359 aa16.38■□□□□ 0.21
SMPD4-204ENST00000430682 KLRG2A4D1S0 409 aaPredicted RBP16.38■□□□□ 0.21
SMPD4-204ENST00000430682 KIF3CO14782 793 aa16.38■□□□□ 0.21
SMPD4-204ENST00000430682 ZNF853P0CG23 659 aa16.38■□□□□ 0.21
SMPD4-204ENST00000430682 GPTP24298 496 aa16.38■□□□□ 0.21
SMPD4-204ENST00000430682 ST5P78524 1137 aa16.38■□□□□ 0.21
SMPD4-204ENST00000430682 RNF181Q9P0P0 153 aa16.38■□□□□ 0.21
SMPD4-204ENST00000430682 LAMB2P55268 1798 aa16.38■□□□□ 0.21
SMPD4-204ENST00000430682 C21orf2O43822 256 aa16.37■□□□□ 0.21
SMPD4-204ENST00000430682 NUTM1Q86Y26 1132 aa16.37■□□□□ 0.21
SMPD4-204ENST00000430682 ZNF34Q8IZ26 560 aa16.37■□□□□ 0.21
SMPD4-204ENST00000430682 CFAP44Q96MT7 982 aa16.37■□□□□ 0.21
SMPD4-204ENST00000430682 MBIPQ9NS73 344 aa16.37■□□□□ 0.21
SMPD4-204ENST00000430682 TAF1P21675 1872 aa16.36■□□□□ 0.21
SMPD4-204ENST00000430682 NPHP1O15259 732 aa16.36■□□□□ 0.21
SMPD4-204ENST00000430682 ERFEQ4G0M1 354 aa16.36■□□□□ 0.21
SMPD4-204ENST00000430682 SUSD4Q5VX71 490 aa16.36■□□□□ 0.21
SMPD4-204ENST00000430682 STYK1Q6J9G0 422 aa16.36■□□□□ 0.21
SMPD4-204ENST00000430682 TPTE2Q6XPS3 522 aa16.36■□□□□ 0.21
SMPD4-204ENST00000430682 GIGYF2Q6Y7W6 1299 aaKnown RBP16.36■□□□□ 0.21
SMPD4-204ENST00000430682 KIF6Q6ZMV9 814 aa16.36■□□□□ 0.21
SMPD4-204ENST00000430682 NMRK2Q9NPI5 230 aa16.36■□□□□ 0.21
SMPD4-204ENST00000430682 PRPF40BQ6NWY9 871 aaKnown RBP16.35■□□□□ 0.21
SMPD4-204ENST00000430682 OLFM4Q6UX06 510 aa16.35■□□□□ 0.21
SMPD4-204ENST00000430682 COPS6Q7L5N1 327 aa16.35■□□□□ 0.21
SMPD4-204ENST00000430682 SLC51AQ86UW1 340 aa16.35■□□□□ 0.21
SMPD4-204ENST00000430682 XAGE3Q8WTP9 111 aa16.35■□□□□ 0.21
SMPD4-204ENST00000430682 C7orf43Q8WVR3 580 aa16.35■□□□□ 0.21
SMPD4-204ENST00000430682 MASTLQ96GX5 879 aa16.35■□□□□ 0.21
SMPD4-204ENST00000430682 CHPF2Q9P2E5 772 aa16.35■□□□□ 0.21
SMPD4-204ENST00000430682 PDZRN3Q9UPQ7 1066 aa16.35■□□□□ 0.21
SMPD4-204ENST00000430682 NTSR2O95665 410 aa16.34■□□□□ 0.21
SMPD4-204ENST00000430682 AIMP1Q12904 312 aaKnown RBP16.34■□□□□ 0.21
SMPD4-204ENST00000430682 C3orf67Q6ZVT6 689 aa16.34■□□□□ 0.21
SMPD4-204ENST00000430682 DDX21Q9NR30 783 aaKnown RBP eCLIP16.34■□□□□ 0.21
SMPD4-204ENST00000430682 DUSP27Q5VZP5 1158 aa16.33■□□□□ 0.2
SMPD4-204ENST00000430682 ZNF428Q96B54 188 aa16.33■□□□□ 0.2
SMPD4-204ENST00000430682 NPR1P16066 1061 aa16.32■□□□□ 0.2
SMPD4-204ENST00000430682 LMNB1P20700 586 aa16.32■□□□□ 0.2
SMPD4-204ENST00000430682 HDGFL1Q5TGJ6 251 aa16.32■□□□□ 0.2
SMPD4-204ENST00000430682 SYNE4Q8N205 404 aa16.32■□□□□ 0.2
SMPD4-204ENST00000430682 C8orf58Q8NAV2 365 aa16.32■□□□□ 0.2
SMPD4-204ENST00000430682 CNKSR1Q969H4 720 aa16.32■□□□□ 0.2
SMPD4-204ENST00000430682 MRS2Q9HD23 443 aa16.32■□□□□ 0.2
SMPD4-204ENST00000430682 DDX60Q8IY21 1712 aaKnown RBP16.31■□□□□ 0.2
SMPD4-204ENST00000430682 IBTKQ9P2D0 1353 aaPredicted RBP16.31■□□□□ 0.2
SMPD4-204ENST00000430682 ELL2O00472 640 aaPredicted RBP16.31■□□□□ 0.2
SMPD4-204ENST00000430682 IFT57Q9NWB7 429 aa16.31■□□□□ 0.2
SMPD4-204ENST00000430682 RIC1Q4ADV7 1423 aa16.3■□□□□ 0.2
SMPD4-204ENST00000430682 GNAI1P63096 354 aa16.3■□□□□ 0.2
SMPD4-204ENST00000430682 CRY2Q49AN0 593 aa16.3■□□□□ 0.2
SMPD4-204ENST00000430682 NYXQ9GZU5 481 aa16.3■□□□□ 0.2
SMPD4-204ENST00000430682 SNED1Q8TER0 1413 aa16.29■□□□□ 0.2
SMPD4-204ENST00000430682 ANP32CO43423 234 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms