RNA–Protein interactions for RNA: ENST00000430591.1

SMC6-205, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-205ENST00000430591 PRKRIP1Q9H875 184 aaPredicted RBP8.84□□□□□ -0.99
SMC6-205ENST00000430591 TFCP2L1Q9NZI6 479 aa8.84□□□□□ -0.99
SMC6-205ENST00000430591 PLEKHG2Q9H7P9 1386 aa8.84□□□□□ -0.99
SMC6-205ENST00000430591 PRAMEF22A3QJZ6 481 aa8.83□□□□□ -1
SMC6-205ENST00000430591 FAM205CA6NFA0 338 aa8.83□□□□□ -1
SMC6-205ENST00000430591 DNAJC10Q8IXB1 793 aa8.83□□□□□ -1
SMC6-205ENST00000430591 TMC2Q8TDI7 906 aa8.83□□□□□ -1
SMC6-205ENST00000430591 HS3ST6Q96QI5 342 aa8.83□□□□□ -1
SMC6-205ENST00000430591 SPON1Q9HCB6 807 aa8.83□□□□□ -1
SMC6-205ENST00000430591 RRP7AQ9Y3A4 280 aaKnown RBP8.83□□□□□ -1
SMC6-205ENST00000430591 ZNF831Q5JPB2 1677 aa8.83□□□□□ -1
SMC6-205ENST00000430591 MYBBP1AQ9BQG0 1328 aaKnown RBP8.82□□□□□ -1
SMC6-205ENST00000430591 GNAT3A8MTJ3 354 aa8.82□□□□□ -1
SMC6-205ENST00000430591 RIMBP2O15034 1052 aa8.82□□□□□ -1
SMC6-205ENST00000430591 HSP90AB1P08238 724 aaKnown RBP8.82□□□□□ -1
SMC6-205ENST00000430591 PIP4K2AP48426 406 aaPredicted RBP8.82□□□□□ -1
SMC6-205ENST00000430591 SMARCC1Q92922 1105 aaPredicted RBP8.82□□□□□ -1
SMC6-205ENST00000430591 KHSRPQ92945 711 aaKnown RBP eCLIP8.82□□□□□ -1
SMC6-205ENST00000430591 ZSWIM6Q9HCJ5 1215 aa8.82□□□□□ -1
SMC6-205ENST00000430591 PLSCR2Q9NRY7 297 aa8.82□□□□□ -1
SMC6-205ENST00000430591 MIS18AQ9NYP9 233 aa8.82□□□□□ -1
SMC6-205ENST00000430591 CICQ96RK0 1608 aaPredicted RBP8.82□□□□□ -1
SMC6-205ENST00000430591 GNPATO15228 680 aa8.81□□□□□ -1
SMC6-205ENST00000430591 RALBP1Q15311 655 aa8.81□□□□□ -1
SMC6-205ENST00000430591 AK7Q96M32 723 aa8.81□□□□□ -1
SMC6-205ENST00000430591 NUDCQ9Y266 331 aa8.81□□□□□ -1
SMC6-205ENST00000430591 CEMIPQ8WUJ3 1361 aa8.81□□□□□ -1
SMC6-205ENST00000430591 KDM3BQ7LBC6 1761 aa8.81□□□□□ -1
SMC6-205ENST00000430591 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.8□□□□□ -1
SMC6-205ENST00000430591 FCHSD2O94868 740 aa8.8□□□□□ -1
SMC6-205ENST00000430591 CRKLP46109 303 aaKnown RBP8.8□□□□□ -1
SMC6-205ENST00000430591 ARSIQ5FYB1 569 aa8.8□□□□□ -1
SMC6-205ENST00000430591 GAS2L2Q8NHY3 880 aa8.8□□□□□ -1
SMC6-205ENST00000430591 ZNF496Q96IT1 587 aaPredicted RBP8.8□□□□□ -1
SMC6-205ENST00000430591 FHDC1Q9C0D6 1143 aaPredicted RBP8.8□□□□□ -1
SMC6-205ENST00000430591 MTFR1LQ9H019 292 aa8.8□□□□□ -1
SMC6-205ENST00000430591 RYDENQ9NUL5 291 aaKnown RBP8.8□□□□□ -1
SMC6-205ENST00000430591 SRP68Q9UHB9 627 aaKnown RBP8.8□□□□□ -1
SMC6-205ENST00000430591 ADAMTS8Q9UP79 889 aa8.8□□□□□ -1
SMC6-205ENST00000430591 INTS5Q6P9B9 1019 aaKnown RBP8.79□□□□□ -1
SMC6-205ENST00000430591 NLGN2Q8NFZ4 835 aa8.79□□□□□ -1
SMC6-205ENST00000430591 GPHNQ9NQX3 736 aaPredicted RBP8.79□□□□□ -1
SMC6-205ENST00000430591 WWC3Q9ULE0 1092 aa8.79□□□□□ -1
SMC6-205ENST00000430591 CYP19A1P11511 503 aaPredicted RBP8.78□□□□□ -1
SMC6-205ENST00000430591 FOXK1P85037 733 aa8.78□□□□□ -1
SMC6-205ENST00000430591 TEFQ10587 303 aa8.78□□□□□ -1
SMC6-205ENST00000430591 DSG2Q14126 1118 aa8.78□□□□□ -1
SMC6-205ENST00000430591 NEUROD2Q15784 382 aa8.78□□□□□ -1
SMC6-205ENST00000430591 ARHGEF1Q92888 912 aaKnown RBP8.78□□□□□ -1
SMC6-205ENST00000430591 PPP1R1BQ9UD71 204 aaPredicted RBP8.78□□□□□ -1
SMC6-205ENST00000430591 ZBTB1Q9Y2K1 713 aa8.78□□□□□ -1
SMC6-205ENST00000430591 KIAA1551Q9HCM1 1747 aa8.77□□□□□ -1
SMC6-205ENST00000430591 NFE2L2Q16236 605 aa8.77□□□□□ -1.01
SMC6-205ENST00000430591 ZNF790Q6PG37 636 aa8.77□□□□□ -1.01
SMC6-205ENST00000430591 ARXQ96QS3 562 aa8.77□□□□□ -1.01
SMC6-205ENST00000430591 KRTAP3-3Q9BYR6 98 aa8.77□□□□□ -1.01
SMC6-205ENST00000430591 KRTAP3-2Q9BYR7 98 aa8.77□□□□□ -1.01
SMC6-205ENST00000430591 CRISPLD2Q9H0B8 497 aa8.77□□□□□ -1.01
SMC6-205ENST00000430591 DAXXQ9UER7 740 aaPredicted RBP8.77□□□□□ -1.01
SMC6-205ENST00000430591 CNTNAP4Q9C0A0 1308 aa8.77□□□□□ -1.01
SMC6-205ENST00000430591 N4BP2Q86UW6 1770 aaPredicted RBP8.76□□□□□ -1.01
SMC6-205ENST00000430591 HEG1Q9ULI3 1381 aa8.76□□□□□ -1.01
SMC6-205ENST00000430591 BTBD11A6QL63 1104 aa8.76□□□□□ -1.01
SMC6-205ENST00000430591 RPS6KA4O75676 772 aa8.76□□□□□ -1.01
SMC6-205ENST00000430591 SLC34A2O95436 690 aa8.76□□□□□ -1.01
SMC6-205ENST00000430591 A1BGP04217 495 aa8.76□□□□□ -1.01
SMC6-205ENST00000430591 TMPOP42166 694 aaKnown RBP8.76□□□□□ -1.01
SMC6-205ENST00000430591 KRT24Q2M2I5 525 aa8.76□□□□□ -1.01
SMC6-205ENST00000430591 SYT17Q9BSW7 474 aa8.76□□□□□ -1.01
SMC6-205ENST00000430591 USP16Q9Y5T5 823 aa8.76□□□□□ -1.01
SMC6-205ENST00000430591 AFDNP55196 1824 aaKnown RBP8.75□□□□□ -1.01
SMC6-205ENST00000430591 GYS1P13807 737 aa8.75□□□□□ -1.01
SMC6-205ENST00000430591 CANXP27824 592 aaKnown RBP8.75□□□□□ -1.01
SMC6-205ENST00000430591 SSFA2P28290 1259 aa8.75□□□□□ -1.01
SMC6-205ENST00000430591 RIPK4P57078 832 aa8.75□□□□□ -1.01
SMC6-205ENST00000430591 VARS2Q5ST30 1063 aaKnown RBP8.75□□□□□ -1.01
SMC6-205ENST00000430591 PLPP6Q8IY26 295 aa8.75□□□□□ -1.01
SMC6-205ENST00000430591 BCL2L12Q9HB09 334 aa8.75□□□□□ -1.01
SMC6-205ENST00000430591 CCDC87Q9NVE4 849 aa8.75□□□□□ -1.01
SMC6-205ENST00000430591 RTCBQ9Y3I0 505 aaKnown RBP8.75□□□□□ -1.01
SMC6-205ENST00000430591 PCDHGA4Q9Y5G9 962 aa8.75□□□□□ -1.01
SMC6-205ENST00000430591 LAMB4A4D0S4 1761 aa8.75□□□□□ -1.01
SMC6-205ENST00000430591 GOLGB1Q14789 3259 aaKnown RBP8.75□□□□□ -1.01
SMC6-205ENST00000430591 SOS1Q07889 1333 aaPredicted RBP8.75□□□□□ -1.01
SMC6-205ENST00000430591 UTRNP46939 3433 aa8.74□□□□□ -1.01
SMC6-205ENST00000430591 MMP10P09238 476 aa8.74□□□□□ -1.01
SMC6-205ENST00000430591 DDR1Q08345 913 aa8.74□□□□□ -1.01
SMC6-205ENST00000430591 WDR43Q15061 677 aaKnown RBP eCLIP8.74□□□□□ -1.01
SMC6-205ENST00000430591 RC3H1Q5TC82 1133 aaKnown RBP8.74□□□□□ -1.01
SMC6-205ENST00000430591 TTC5Q8N0Z6 440 aa8.74□□□□□ -1.01
SMC6-205ENST00000430591 SLC16A10Q8TF71 515 aa8.74□□□□□ -1.01
SMC6-205ENST00000430591 RTF1Q92541 710 aaKnown RBP8.74□□□□□ -1.01
SMC6-205ENST00000430591 MAPK8IP3Q9UPT6 1336 aa8.74□□□□□ -1.01
SMC6-205ENST00000430591 COL15A1P39059 1388 aa8.73□□□□□ -1.01
SMC6-205ENST00000430591 SCN7AQ01118 1682 aa8.73□□□□□ -1.01
SMC6-205ENST00000430591 NBPF26B4DH59 902 aa8.73□□□□□ -1.01
SMC6-205ENST00000430591 APAF1O14727 1248 aa8.73□□□□□ -1.01
SMC6-205ENST00000430591 NUDT7P0C024 238 aa8.73□□□□□ -1.01
SMC6-205ENST00000430591 TRAPPC3LQ5T215 181 aa8.73□□□□□ -1.01
SMC6-205ENST00000430591 USPL1Q5W0Q7 1092 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms