RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 RALBP1Q15311 655 aa15.62■□□□□ 0.09
HDAC4-202ENST00000430200 SLC51AQ86UW1 340 aa15.62■□□□□ 0.09
HDAC4-202ENST00000430200 CCDC146Q8IYE0 955 aa15.62■□□□□ 0.09
HDAC4-202ENST00000430200 CNBD1Q8NA66 436 aa15.62■□□□□ 0.09
HDAC4-202ENST00000430200 MAPK8IP3Q9UPT6 1336 aa15.62■□□□□ 0.09
HDAC4-202ENST00000430200 SNED1Q8TER0 1413 aa15.61■□□□□ 0.09
HDAC4-202ENST00000430200 TTLL7Q6ZT98 887 aa15.61■□□□□ 0.09
HDAC4-202ENST00000430200 TTLL6Q8N841 843 aa15.61■□□□□ 0.09
HDAC4-202ENST00000430200 BRIP1Q9BX63 1249 aa15.61■□□□□ 0.09
HDAC4-202ENST00000430200 RRP7AQ9Y3A4 280 aaKnown RBP15.61■□□□□ 0.09
HDAC4-202ENST00000430200 COL4A5P29400 1685 aa15.6■□□□□ 0.09
HDAC4-202ENST00000430200 H0YIN7 160 aa15.6■□□□□ 0.09
HDAC4-202ENST00000430200 LRP10Q7Z4F1 713 aa15.6■□□□□ 0.09
HDAC4-202ENST00000430200 SETDB2Q96T68 719 aa15.6■□□□□ 0.09
HDAC4-202ENST00000430200 ZNF219Q9P2Y4 722 aaPredicted RBP15.6■□□□□ 0.09
HDAC4-202ENST00000430200 UBN2Q6ZU65 1347 aa15.6■□□□□ 0.09
HDAC4-202ENST00000430200 COL4A1P02462 1669 aa15.6■□□□□ 0.09
HDAC4-202ENST00000430200 SRGNP10124 158 aa15.59■□□□□ 0.09
HDAC4-202ENST00000430200 PROSER3Q2NL68 480 aa15.59■□□□□ 0.09
HDAC4-202ENST00000430200 FAM177BA6PVY3 158 aa15.58■□□□□ 0.08
HDAC4-202ENST00000430200 C21orf2O43822 256 aa15.58■□□□□ 0.08
HDAC4-202ENST00000430200 HSPA6P17066 643 aa15.58■□□□□ 0.08
HDAC4-202ENST00000430200 TMPOP42166 694 aaKnown RBP15.58■□□□□ 0.08
HDAC4-202ENST00000430200 KRT24Q2M2I5 525 aa15.58■□□□□ 0.08
HDAC4-202ENST00000430200 OLFM4Q6UX06 510 aa15.58■□□□□ 0.08
HDAC4-202ENST00000430200 ZNF622Q969S3 477 aaKnown RBP eCLIP15.58■□□□□ 0.08
HDAC4-202ENST00000430200 ANXA1P04083 346 aa15.57■□□□□ 0.08
HDAC4-202ENST00000430200 RIPK4P57078 832 aa15.57■□□□□ 0.08
HDAC4-202ENST00000430200 PRPF40BQ6NWY9 871 aaKnown RBP15.57■□□□□ 0.08
HDAC4-202ENST00000430200 CLEC4GQ6UXB4 293 aa15.57■□□□□ 0.08
HDAC4-202ENST00000430200 NGEFQ8N5V2 710 aa15.57■□□□□ 0.08
HDAC4-202ENST00000430200 TRIM35Q9UPQ4 493 aa15.57■□□□□ 0.08
HDAC4-202ENST00000430200 NIP7Q9Y221 180 aaKnown RBP eCLIP15.57■□□□□ 0.08
HDAC4-202ENST00000430200 MYL6BP14649 208 aa15.56■□□□□ 0.08
HDAC4-202ENST00000430200 LMNB1P20700 586 aa15.56■□□□□ 0.08
HDAC4-202ENST00000430200 PDE6BP35913 854 aa15.56■□□□□ 0.08
HDAC4-202ENST00000430200 ST5P78524 1137 aa15.56■□□□□ 0.08
HDAC4-202ENST00000430200 PDIA6Q15084 440 aa15.56■□□□□ 0.08
HDAC4-202ENST00000430200 NBPF5PQ86XG9 351 aaPredicted RBP15.56■□□□□ 0.08
HDAC4-202ENST00000430200 PNISRQ8TF01 805 aaKnown RBP15.56■□□□□ 0.08
HDAC4-202ENST00000430200 PRKRIP1Q9H875 184 aaPredicted RBP15.56■□□□□ 0.08
HDAC4-202ENST00000430200 MAP3K15Q6ZN16 1313 aa15.56■□□□□ 0.08
HDAC4-202ENST00000430200 RIC1Q4ADV7 1423 aa15.56■□□□□ 0.08
HDAC4-202ENST00000430200 LRRC37AA6NMS7 1700 aa15.56■□□□□ 0.08
HDAC4-202ENST00000430200 ADAMTSL1Q8N6G6 1762 aa15.56■□□□□ 0.08
HDAC4-202ENST00000430200 NEFMP07197 916 aa15.55■□□□□ 0.08
HDAC4-202ENST00000430200 ZBTB3Q9H5J0 574 aa15.55■□□□□ 0.08
HDAC4-202ENST00000430200 TSPYL4Q9UJ04 414 aa15.55■□□□□ 0.08
HDAC4-202ENST00000430200 ZNF652Q9Y2D9 606 aa15.55■□□□□ 0.08
HDAC4-202ENST00000430200 SCN4AP35499 1836 aa15.54■□□□□ 0.08
HDAC4-202ENST00000430200 LTBP1Q14766 1721 aa15.54■□□□□ 0.08
HDAC4-202ENST00000430200 KLRG2A4D1S0 409 aaPredicted RBP15.54■□□□□ 0.08
HDAC4-202ENST00000430200 STYK1Q6J9G0 422 aa15.54■□□□□ 0.08
HDAC4-202ENST00000430200 C3orf67Q6ZVT6 689 aa15.54■□□□□ 0.08
HDAC4-202ENST00000430200 NUTM1Q86Y26 1132 aa15.54■□□□□ 0.08
HDAC4-202ENST00000430200 C7orf43Q8WVR3 580 aa15.54■□□□□ 0.08
HDAC4-202ENST00000430200 IBTKQ9P2D0 1353 aaPredicted RBP15.53■□□□□ 0.08
HDAC4-202ENST00000430200 ZC3H4Q9UPT8 1303 aaKnown RBP15.53■□□□□ 0.08
HDAC4-202ENST00000430200 RGL2O15211 777 aa15.53■□□□□ 0.08
HDAC4-202ENST00000430200 TOMM70O94826 608 aa15.53■□□□□ 0.08
HDAC4-202ENST00000430200 GPTP24298 496 aa15.53■□□□□ 0.08
HDAC4-202ENST00000430200 NEUROD2Q15784 382 aa15.53■□□□□ 0.08
HDAC4-202ENST00000430200 NPM2Q86SE8 214 aaKnown RBP15.53■□□□□ 0.08
HDAC4-202ENST00000430200 RRAGCQ9HB90 399 aa15.53■□□□□ 0.08
HDAC4-202ENST00000430200 ADAMTS8Q9UP79 889 aa15.53■□□□□ 0.08
HDAC4-202ENST00000430200 LTBP3Q9NS15 1303 aa15.52■□□□□ 0.08
HDAC4-202ENST00000430200 POTECB2RU33 542 aa15.52■□□□□ 0.08
HDAC4-202ENST00000430200 HTRA3P83110 453 aa15.52■□□□□ 0.08
HDAC4-202ENST00000430200 CCDC184Q52MB2 194 aa15.52■□□□□ 0.08
HDAC4-202ENST00000430200 NECTIN2Q92692 538 aa15.52■□□□□ 0.08
HDAC4-202ENST00000430200 MASTLQ96GX5 879 aa15.52■□□□□ 0.08
HDAC4-202ENST00000430200 ERBB4Q15303 1308 aa15.51■□□□□ 0.07
HDAC4-202ENST00000430200 KDM2BQ8NHM5 1336 aa15.51■□□□□ 0.07
HDAC4-202ENST00000430200 DUOX1Q9NRD9 1551 aa15.51■□□□□ 0.07
HDAC4-202ENST00000430200 NPHP1O15259 732 aa15.51■□□□□ 0.07
HDAC4-202ENST00000430200 NTSR2O95665 410 aa15.51■□□□□ 0.07
HDAC4-202ENST00000430200 ERFEQ4G0M1 354 aa15.51■□□□□ 0.07
HDAC4-202ENST00000430200 GLTPD2A6NH11 291 aa15.5■□□□□ 0.07
HDAC4-202ENST00000430200 ERVV-1B6SEH8 477 aa15.5■□□□□ 0.07
HDAC4-202ENST00000430200 CRY2Q49AN0 593 aa15.5■□□□□ 0.07
HDAC4-202ENST00000430200 SUSD4Q5VX71 490 aa15.5■□□□□ 0.07
HDAC4-202ENST00000430200 ZNF34Q8IZ26 560 aa15.5■□□□□ 0.07
HDAC4-202ENST00000430200 RBM46Q8TBY0 533 aaKnown RBP15.5■□□□□ 0.07
HDAC4-202ENST00000430200 CNKSR1Q969H4 720 aa15.5■□□□□ 0.07
HDAC4-202ENST00000430200 RUNDC1Q96C34 613 aa15.5■□□□□ 0.07
HDAC4-202ENST00000430200 TAOK3Q9H2K8 898 aa15.5■□□□□ 0.07
HDAC4-202ENST00000430200 PNNQ9H307 717 aaKnown RBP15.5■□□□□ 0.07
HDAC4-202ENST00000430200 PDZRN3Q9UPQ7 1066 aa15.5■□□□□ 0.07
HDAC4-202ENST00000430200 SPEF2Q9C093 1822 aa15.5■□□□□ 0.07
HDAC4-202ENST00000430200 CHL1O00533 1208 aa15.49■□□□□ 0.07
HDAC4-202ENST00000430200 NPR1P16066 1061 aa15.49■□□□□ 0.07
HDAC4-202ENST00000430200 EIF2S2P20042 333 aaKnown RBP15.49■□□□□ 0.07
HDAC4-202ENST00000430200 KIF6Q6ZMV9 814 aa15.49■□□□□ 0.07
HDAC4-202ENST00000430200 WDR43Q15061 677 aaKnown RBP eCLIP15.48■□□□□ 0.07
HDAC4-202ENST00000430200 TPTE2Q6XPS3 522 aa15.48■□□□□ 0.07
HDAC4-202ENST00000430200 GIGYF2Q6Y7W6 1299 aaKnown RBP15.48■□□□□ 0.07
HDAC4-202ENST00000430200 ZNF541Q9H0D2 1346 aa15.47■□□□□ 0.07
HDAC4-202ENST00000430200 LMOD3Q0VAK6 560 aa15.47■□□□□ 0.07
HDAC4-202ENST00000430200 ZNF428Q96B54 188 aa15.47■□□□□ 0.07
HDAC4-202ENST00000430200 POTEIP0CG38 1075 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms