RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 TCHHQ07283 1943 aa18.07■□□□□ 0.48
LINC00839-202ENST00000429940 DYNC1I1O14576 645 aa18.06■□□□□ 0.48
LINC00839-202ENST00000429940 LIMCH1Q9UPQ0 1083 aa18.06■□□□□ 0.48
LINC00839-202ENST00000429940 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.06■□□□□ 0.48
LINC00839-202ENST00000429940 HOXC9P31274 260 aa18.06■□□□□ 0.48
LINC00839-202ENST00000429940 MARF1Q9Y4F3 1742 aaKnown RBP18.06■□□□□ 0.48
LINC00839-202ENST00000429940 ZBTB7CA1YPR0 619 aa18.05■□□□□ 0.48
LINC00839-202ENST00000429940 STX6O43752 255 aa18.05■□□□□ 0.48
LINC00839-202ENST00000429940 LETM1O95202 739 aaPredicted RBP18.05■□□□□ 0.48
LINC00839-202ENST00000429940 RUFY3Q7L099 469 aa18.05■□□□□ 0.48
LINC00839-202ENST00000429940 RASEFQ8IZ41 740 aa18.05■□□□□ 0.48
LINC00839-202ENST00000429940 LARP6Q9BRS8 491 aaKnown RBP18.05■□□□□ 0.48
LINC00839-202ENST00000429940 SYT1P21579 422 aa18.05■□□□□ 0.48
LINC00839-202ENST00000429940 TPRNQ4KMQ1 711 aa18.05■□□□□ 0.48
LINC00839-202ENST00000429940 USP25Q9UHP3 1055 aa18.05■□□□□ 0.48
LINC00839-202ENST00000429940 UBE2HP62256 183 aa18.04■□□□□ 0.48
LINC00839-202ENST00000429940 CWC27Q6UX04 472 aaKnown RBP18.04■□□□□ 0.48
LINC00839-202ENST00000429940 SMC3Q9UQE7 1217 aa18.04■□□□□ 0.48
LINC00839-202ENST00000429940 NBPF7P0C2Y1 421 aaPredicted RBP18.03■□□□□ 0.48
LINC00839-202ENST00000429940 CABLES1Q8TDN4 633 aa18.03■□□□□ 0.48
LINC00839-202ENST00000429940 LTV1Q96GA3 475 aaPredicted RBP18.03■□□□□ 0.48
LINC00839-202ENST00000429940 F13A1P00488 732 aa18.03■□□□□ 0.48
LINC00839-202ENST00000429940 PKNOX2Q96KN3 472 aa18.03■□□□□ 0.48
LINC00839-202ENST00000429940 SPG7Q9UQ90 795 aa18.03■□□□□ 0.48
LINC00839-202ENST00000429940 LTBP4Q8N2S1 1624 aa18.03■□□□□ 0.48
LINC00839-202ENST00000429940 EIF2S2P20042 333 aaKnown RBP18.02■□□□□ 0.48
LINC00839-202ENST00000429940 ATP6V1DQ9Y5K8 247 aa18.02■□□□□ 0.48
LINC00839-202ENST00000429940 CRYBG1Q9Y4K1 1723 aa18.02■□□□□ 0.48
LINC00839-202ENST00000429940 ADCY5O95622 1261 aa18.02■□□□□ 0.47
LINC00839-202ENST00000429940 HCLS1P14317 486 aaPredicted RBP18.02■□□□□ 0.47
LINC00839-202ENST00000429940 CASTP20810 708 aaKnown RBP18.02■□□□□ 0.47
LINC00839-202ENST00000429940 MPNDQ8N594 471 aa18.02■□□□□ 0.47
LINC00839-202ENST00000429940 KIF1AQ12756 1690 aa18.02■□□□□ 0.47
LINC00839-202ENST00000429940 FIBPO43427 364 aa18.01■□□□□ 0.47
LINC00839-202ENST00000429940 HSP90AB4PQ58FF6 505 aa18.01■□□□□ 0.47
LINC00839-202ENST00000429940 DNTTIP2Q5QJE6 756 aaKnown RBP18.01■□□□□ 0.47
LINC00839-202ENST00000429940 TRPM3Q9HCF6 1732 aaPredicted RBP18.01■□□□□ 0.47
LINC00839-202ENST00000429940 CPA1P15085 419 aa18.01■□□□□ 0.47
LINC00839-202ENST00000429940 NPHP3Q7Z494 1330 aa18.01■□□□□ 0.47
LINC00839-202ENST00000429940 ZNF830Q96NB3 372 aaPredicted RBP18.01■□□□□ 0.47
LINC00839-202ENST00000429940 OS9Q13438 667 aaPredicted RBP18■□□□□ 0.47
LINC00839-202ENST00000429940 BEND3Q5T5X7 828 aa18■□□□□ 0.47
LINC00839-202ENST00000429940 DIAPH3Q9NSV4 1193 aa18■□□□□ 0.47
LINC00839-202ENST00000429940 TTC41PQ6P2S7 1318 aa18■□□□□ 0.47
LINC00839-202ENST00000429940 USP42Q9H9J4 1324 aaKnown RBP18■□□□□ 0.47
LINC00839-202ENST00000429940 GLRX3O76003 335 aaKnown RBP18■□□□□ 0.47
LINC00839-202ENST00000429940 LARGE1O95461 756 aa18■□□□□ 0.47
LINC00839-202ENST00000429940 MTERF4Q7Z6M4 381 aaKnown RBP18■□□□□ 0.47
LINC00839-202ENST00000429940 USHBP1Q8N6Y0 703 aa18■□□□□ 0.47
LINC00839-202ENST00000429940 DNAAF4Q8WXU2 420 aa18■□□□□ 0.47
LINC00839-202ENST00000429940 PIBF1Q8WXW3 757 aa18■□□□□ 0.47
LINC00839-202ENST00000429940 HYPKQ9NX55 129 aa18■□□□□ 0.47
LINC00839-202ENST00000429940 GCP02774 474 aa17.99■□□□□ 0.47
LINC00839-202ENST00000429940 CCDC83Q8IWF9 413 aa17.99■□□□□ 0.47
LINC00839-202ENST00000429940 RUFY2Q8WXA3 655 aa17.99■□□□□ 0.47
LINC00839-202ENST00000429940 CHPF2Q9P2E5 772 aa17.99■□□□□ 0.47
LINC00839-202ENST00000429940 PI4KAP2A4QPH2 592 aa17.98■□□□□ 0.47
LINC00839-202ENST00000429940 GJB2P29033 226 aa17.98■□□□□ 0.47
LINC00839-202ENST00000429940 PI4KAP1Q8N8J0 262 aa17.98■□□□□ 0.47
LINC00839-202ENST00000429940 PDRG1Q9NUG6 133 aa17.98■□□□□ 0.47
LINC00839-202ENST00000429940 EIF4A1P60842 406 aaKnown RBP17.97■□□□□ 0.47
LINC00839-202ENST00000429940 ZC3H6P61129 1189 aaKnown RBP17.97■□□□□ 0.47
LINC00839-202ENST00000429940 NOLC1Q14978 699 aaKnown RBP eCLIP17.97■□□□□ 0.47
LINC00839-202ENST00000429940 VPS53Q5VIR6 699 aa17.97■□□□□ 0.47
LINC00839-202ENST00000429940 JAKMIP1Q96N16 626 aaKnown RBP17.97■□□□□ 0.47
LINC00839-202ENST00000429940 TTC12Q9H892 705 aaPredicted RBP17.97■□□□□ 0.47
LINC00839-202ENST00000429940 CEMIPQ8WUJ3 1361 aa17.97■□□□□ 0.47
LINC00839-202ENST00000429940 PXDNQ92626 1479 aa17.97■□□□□ 0.47
LINC00839-202ENST00000429940 KDM4AO75164 1064 aa17.97■□□□□ 0.47
LINC00839-202ENST00000429940 PTH1RQ03431 593 aa17.97■□□□□ 0.47
LINC00839-202ENST00000429940 DNM1Q05193 864 aaKnown RBP17.96■□□□□ 0.47
LINC00839-202ENST00000429940 ADCK5Q3MIX3 580 aa17.96■□□□□ 0.47
LINC00839-202ENST00000429940 GIMAP6Q6P9H5 292 aa17.96■□□□□ 0.47
LINC00839-202ENST00000429940 CLASRPQ8N2M8 674 aaKnown RBP17.96■□□□□ 0.47
LINC00839-202ENST00000429940 MYRIPQ8NFW9 859 aa17.96■□□□□ 0.47
LINC00839-202ENST00000429940 MTMR6Q9Y217 621 aa17.96■□□□□ 0.47
LINC00839-202ENST00000429940 HOXB7P09629 217 aa17.96■□□□□ 0.47
LINC00839-202ENST00000429940 PRPF40BQ6NWY9 871 aaKnown RBP17.96■□□□□ 0.47
LINC00839-202ENST00000429940 ZSCAN31Q96LW9 406 aaPredicted RBP17.96■□□□□ 0.47
LINC00839-202ENST00000429940 FUCA2Q9BTY2 467 aa17.96■□□□□ 0.47
LINC00839-202ENST00000429940 SH2B1Q9NRF2 756 aaPredicted RBP17.96■□□□□ 0.47
LINC00839-202ENST00000429940 CYP46A1Q9Y6A2 500 aa17.96■□□□□ 0.47
LINC00839-202ENST00000429940 USP54Q70EL1 1684 aa17.95■□□□□ 0.46
LINC00839-202ENST00000429940 PIP4K2BP78356 416 aa17.95■□□□□ 0.46
LINC00839-202ENST00000429940 KLHL34Q8N239 644 aa17.95■□□□□ 0.46
LINC00839-202ENST00000429940 CHMP4AQ9BY43 222 aa17.95■□□□□ 0.46
LINC00839-202ENST00000429940 ZSWIM6Q9HCJ5 1215 aa17.95■□□□□ 0.46
LINC00839-202ENST00000429940 MED1Q15648 1581 aaPredicted RBP17.95■□□□□ 0.46
LINC00839-202ENST00000429940 KDM3BQ7LBC6 1761 aa17.95■□□□□ 0.46
LINC00839-202ENST00000429940 DTNBO60941 627 aa17.95■□□□□ 0.46
LINC00839-202ENST00000429940 GPATCH3Q96I76 525 aa17.95■□□□□ 0.46
LINC00839-202ENST00000429940 PRIMPOLQ96LW4 560 aa17.95■□□□□ 0.46
LINC00839-202ENST00000429940 TM6SF1Q9BZW5 370 aa17.95■□□□□ 0.46
LINC00839-202ENST00000429940 LGR6Q9HBX8 967 aa17.95■□□□□ 0.46
LINC00839-202ENST00000429940 ECHDC1Q9NTX5 307 aa17.95■□□□□ 0.46
LINC00839-202ENST00000429940 ALS2Q96Q42 1657 aa17.94■□□□□ 0.46
LINC00839-202ENST00000429940 SPATA31A3Q5VYP0 1347 aa17.94■□□□□ 0.46
LINC00839-202ENST00000429940 ANXA1P04083 346 aa17.94■□□□□ 0.46
LINC00839-202ENST00000429940 PLCB2Q00722 1185 aa17.94■□□□□ 0.46
LINC00839-202ENST00000429940 ADCY9O60503 1353 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms