RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 CARMIL3Q8ND23 1372 aa22.69■■□□□ 1.22
CTSD-203ENST00000429746 ANXA1P04083 346 aa22.69■■□□□ 1.22
CTSD-203ENST00000429746 TSR2Q969E8 191 aaKnown RBP22.69■■□□□ 1.22
CTSD-203ENST00000429746 RGL2O15211 777 aa22.68■■□□□ 1.22
CTSD-203ENST00000429746 EIF2S2P20042 333 aaKnown RBP22.68■■□□□ 1.22
CTSD-203ENST00000429746 TGFB2P61812 414 aa22.68■■□□□ 1.22
CTSD-203ENST00000429746 HLFQ16534 295 aa22.68■■□□□ 1.22
CTSD-203ENST00000429746 DUSP27Q5VZP5 1158 aa22.68■■□□□ 1.22
CTSD-203ENST00000429746 SALL2Q9Y467 1007 aaPredicted RBP22.68■■□□□ 1.22
CTSD-203ENST00000429746 MYL6BP14649 208 aa22.67■■□□□ 1.22
CTSD-203ENST00000429746 WDR63Q8IWG1 891 aa22.67■■□□□ 1.22
CTSD-203ENST00000429746 TSPYL6Q8N831 410 aa22.67■■□□□ 1.22
CTSD-203ENST00000429746 PARP3Q9Y6F1 533 aa22.67■■□□□ 1.22
CTSD-203ENST00000429746 DLEC1Q9Y238 1755 aa22.66■■□□□ 1.22
CTSD-203ENST00000429746 CLEC4GQ6UXB4 293 aa22.66■■□□□ 1.22
CTSD-203ENST00000429746 NECTIN2Q92692 538 aa22.66■■□□□ 1.22
CTSD-203ENST00000429746 KCNA3P22001 575 aa22.65■■□□□ 1.22
CTSD-203ENST00000429746 DDX21Q9NR30 783 aaKnown RBP eCLIP22.65■■□□□ 1.22
CTSD-203ENST00000429746 COL11A2P13942 1736 aaPredicted RBP22.65■■□□□ 1.22
CTSD-203ENST00000429746 MAP3K15Q6ZN16 1313 aa22.64■■□□□ 1.22
CTSD-203ENST00000429746 FANCIQ9NVI1 1328 aa22.64■■□□□ 1.22
CTSD-203ENST00000429746 ANKRD36CQ5JPF3 1778 aa22.64■■□□□ 1.22
CTSD-203ENST00000429746 SERPINB2P05120 415 aa22.64■■□□□ 1.21
CTSD-203ENST00000429746 NGEFQ8N5V2 710 aa22.64■■□□□ 1.21
CTSD-203ENST00000429746 CHPF2Q9P2E5 772 aa22.64■■□□□ 1.21
CTSD-203ENST00000429746 ATP10DQ9P241 1426 aa22.64■■□□□ 1.21
CTSD-203ENST00000429746 ERVV-1B6SEH8 477 aa22.63■■□□□ 1.21
CTSD-203ENST00000429746 HDGFL1Q5TGJ6 251 aa22.63■■□□□ 1.21
CTSD-203ENST00000429746 BICDL1Q6ZP65 573 aa22.63■■□□□ 1.21
CTSD-203ENST00000429746 ELL2O00472 640 aaPredicted RBP22.62■■□□□ 1.21
CTSD-203ENST00000429746 PRR5LQ6MZQ0 368 aa22.61■■□□□ 1.21
CTSD-203ENST00000429746 UBN2Q6ZU65 1347 aa22.59■■□□□ 1.21
CTSD-203ENST00000429746 ARFGEF2Q9Y6D5 1785 aa22.59■■□□□ 1.21
CTSD-203ENST00000429746 A0A0G2JLW4 131 aa22.59■■□□□ 1.21
CTSD-203ENST00000429746 DPEP1P16444 411 aa22.59■■□□□ 1.21
CTSD-203ENST00000429746 COPS6Q7L5N1 327 aa22.59■■□□□ 1.21
CTSD-203ENST00000429746 XAGE3Q8WTP9 111 aa22.59■■□□□ 1.21
CTSD-203ENST00000429746 ZBTB3Q9H5J0 574 aa22.59■■□□□ 1.21
CTSD-203ENST00000429746 TNRC6CQ9HCJ0 1690 aaKnown RBP22.58■■□□□ 1.21
CTSD-203ENST00000429746 GIGYF2Q6Y7W6 1299 aaKnown RBP22.58■■□□□ 1.21
CTSD-203ENST00000429746 ZNF34Q8IZ26 560 aa22.58■■□□□ 1.21
CTSD-203ENST00000429746 DBF4Q9UBU7 674 aaPredicted RBP22.58■■□□□ 1.21
CTSD-203ENST00000429746 ARFGEF1Q9Y6D6 1849 aa22.58■■□□□ 1.21
CTSD-203ENST00000429746 NPM2Q86SE8 214 aaKnown RBP22.57■■□□□ 1.2
CTSD-203ENST00000429746 SETDB2Q96T68 719 aa22.57■■□□□ 1.2
CTSD-203ENST00000429746 ZNF652Q9Y2D9 606 aa22.57■■□□□ 1.2
CTSD-203ENST00000429746 CHRNA5P30532 468 aa22.56■■□□□ 1.2
CTSD-203ENST00000429746 CCDC24Q8N4L8 307 aa22.56■■□□□ 1.2
CTSD-203ENST00000429746 NIP7Q9Y221 180 aaKnown RBP eCLIP22.56■■□□□ 1.2
CTSD-203ENST00000429746 KIF6Q6ZMV9 814 aa22.55■■□□□ 1.2
CTSD-203ENST00000429746 PHAXQ9H814 394 aaKnown RBP22.55■■□□□ 1.2
CTSD-203ENST00000429746 EXOSC9Q06265 439 aaKnown RBP22.54■■□□□ 1.2
CTSD-203ENST00000429746 TWISTNBQ3B726 338 aaPredicted RBP22.54■■□□□ 1.2
CTSD-203ENST00000429746 WWC3Q9ULE0 1092 aa22.54■■□□□ 1.2
CTSD-203ENST00000429746 ABCC12Q96J65 1359 aa22.53■■□□□ 1.2
CTSD-203ENST00000429746 IBTKQ9P2D0 1353 aaPredicted RBP22.53■■□□□ 1.2
CTSD-203ENST00000429746 CACNA1FO60840 1977 aa22.53■■□□□ 1.2
CTSD-203ENST00000429746 VAMP4O75379 141 aa22.53■■□□□ 1.2
CTSD-203ENST00000429746 AIMP1Q12904 312 aaKnown RBP22.53■■□□□ 1.2
CTSD-203ENST00000429746 CNBD1Q8NA66 436 aa22.52■■□□□ 1.2
CTSD-203ENST00000429746 BRIP1Q9BX63 1249 aa22.52■■□□□ 1.2
CTSD-203ENST00000429746 HYPKQ9NX55 129 aa22.52■■□□□ 1.2
CTSD-203ENST00000429746 KLRG2A4D1S0 409 aaPredicted RBP22.51■■□□□ 1.19
CTSD-203ENST00000429746 NTSR2O95665 410 aa22.51■■□□□ 1.19
CTSD-203ENST00000429746 GPTP24298 496 aa22.51■■□□□ 1.19
CTSD-203ENST00000429746 SUSD4Q5VX71 490 aa22.51■■□□□ 1.19
CTSD-203ENST00000429746 TRMT2AQ8IZ69 625 aaKnown RBP22.51■■□□□ 1.19
CTSD-203ENST00000429746 RIC1Q4ADV7 1423 aa22.5■■□□□ 1.19
CTSD-203ENST00000429746 PLBD2Q8NHP8 589 aa22.5■■□□□ 1.19
CTSD-203ENST00000429746 PIM2Q9P1W9 311 aa22.5■■□□□ 1.19
CTSD-203ENST00000429746 ADCY9O60503 1353 aa22.5■■□□□ 1.19
CTSD-203ENST00000429746 TCERG1O14776 1098 aaKnown RBP22.49■■□□□ 1.19
CTSD-203ENST00000429746 GOLGA2Q08379 1002 aa22.49■■□□□ 1.19
CTSD-203ENST00000429746 SLFN5Q08AF3 891 aa22.49■■□□□ 1.19
CTSD-203ENST00000429746 CCDC30Q5VVM6 783 aa22.49■■□□□ 1.19
CTSD-203ENST00000429746 G2E3Q7L622 706 aa22.49■■□□□ 1.19
CTSD-203ENST00000429746 NBPF5PQ86XG9 351 aaPredicted RBP22.49■■□□□ 1.19
CTSD-203ENST00000429746 CDCA7LQ96GN5 454 aa22.49■■□□□ 1.19
CTSD-203ENST00000429746 BCS1LQ9Y276 419 aa22.49■■□□□ 1.19
CTSD-203ENST00000429746 LAMB2P55268 1798 aa22.48■■□□□ 1.19
CTSD-203ENST00000429746 C1QTNF8P60827 252 aa22.48■■□□□ 1.19
CTSD-203ENST00000429746 TCIRG1Q13488 830 aa22.48■■□□□ 1.19
CTSD-203ENST00000429746 ANKRD13DQ6ZTN6 518 aa22.48■■□□□ 1.19
CTSD-203ENST00000429746 ISCA1Q9BUE6 129 aa22.48■■□□□ 1.19
CTSD-203ENST00000429746 MYH16Q9H6N6 1097 aa22.48■■□□□ 1.19
CTSD-203ENST00000429746 NLRP10Q86W26 655 aa22.47■■□□□ 1.19
CTSD-203ENST00000429746 NUTM1Q86Y26 1132 aa22.47■■□□□ 1.19
CTSD-203ENST00000429746 DDX60Q8IY21 1712 aaKnown RBP22.47■■□□□ 1.19
CTSD-203ENST00000429746 SLX4Q8IY92 1834 aa22.47■■□□□ 1.19
CTSD-203ENST00000429746 CACNA1SQ13698 1873 aa22.47■■□□□ 1.19
CTSD-203ENST00000429746 FAM177BA6PVY3 158 aa22.46■■□□□ 1.19
CTSD-203ENST00000429746 ERFEQ4G0M1 354 aa22.46■■□□□ 1.19
CTSD-203ENST00000429746 TPTE2Q6XPS3 522 aa22.46■■□□□ 1.19
CTSD-203ENST00000429746 C2CD5Q86YS7 1000 aa22.46■■□□□ 1.19
CTSD-203ENST00000429746 SRGNP10124 158 aa22.45■■□□□ 1.18
CTSD-203ENST00000429746 E9PSI1 815 aa22.44■■□□□ 1.18
CTSD-203ENST00000429746 ST5P78524 1137 aa22.44■■□□□ 1.18
CTSD-203ENST00000429746 PARP10Q53GL7 1025 aa22.44■■□□□ 1.18
CTSD-203ENST00000429746 DALRD3Q5D0E6 543 aaKnown RBP22.44■■□□□ 1.18
CTSD-203ENST00000429746 C3orf67Q6ZVT6 689 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms