RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 GUCY1B3Q02153 619 aa14.91□□□□□ -0.02
CDH3-202ENST00000429102 CDC37L1Q7L3B6 337 aa14.91□□□□□ -0.02
CDH3-202ENST00000429102 INTS4Q96HW7 963 aaKnown RBP14.91□□□□□ -0.02
CDH3-202ENST00000429102 C16orf45Q96MC5 204 aaPredicted RBP14.91□□□□□ -0.02
CDH3-202ENST00000429102 DNAJC2Q99543 621 aaKnown RBP14.91□□□□□ -0.02
CDH3-202ENST00000429102 PTGS1P23219 599 aa14.9□□□□□ -0.02
CDH3-202ENST00000429102 HOXC9P31274 260 aa14.9□□□□□ -0.02
CDH3-202ENST00000429102 LSG1Q9H089 658 aaKnown RBP14.9□□□□□ -0.02
CDH3-202ENST00000429102 EID1Q9Y6B2 187 aa14.9□□□□□ -0.02
CDH3-202ENST00000429102 SETD1BQ9UPS6 1966 aaKnown RBP14.9□□□□□ -0.02
CDH3-202ENST00000429102 UBE2HP62256 183 aa14.9□□□□□ -0.02
CDH3-202ENST00000429102 SLFNL1Q499Z3 407 aa14.9□□□□□ -0.02
CDH3-202ENST00000429102 TRIM5Q9C035 493 aa14.9□□□□□ -0.02
CDH3-202ENST00000429102 RBM8AQ9Y5S9 174 aaKnown RBP14.9□□□□□ -0.02
CDH3-202ENST00000429102 NRBP1Q9UHY1 535 aa14.9□□□□□ -0.02
CDH3-202ENST00000429102 ATP7BP35670 1465 aa14.89□□□□□ -0.03
CDH3-202ENST00000429102 ANAPC15P60006 121 aa14.89□□□□□ -0.03
CDH3-202ENST00000429102 G3BP1Q13283 466 aaKnown RBP eCLIP14.89□□□□□ -0.03
CDH3-202ENST00000429102 HS1BP3Q53T59 392 aa14.89□□□□□ -0.03
CDH3-202ENST00000429102 NBPF6Q5VWK0 638 aa14.89□□□□□ -0.03
CDH3-202ENST00000429102 RAD50Q92878 1312 aa14.89□□□□□ -0.03
CDH3-202ENST00000429102 NBPF4Q96M43 638 aa14.89□□□□□ -0.03
CDH3-202ENST00000429102 DACT1Q9NYF0 836 aa14.89□□□□□ -0.03
CDH3-202ENST00000429102 TPCN1Q9ULQ1 816 aa14.89□□□□□ -0.03
CDH3-202ENST00000429102 NEURL4Q96JN8 1562 aa14.89□□□□□ -0.03
CDH3-202ENST00000429102 A2ML1A8K2U0 1454 aa14.89□□□□□ -0.03
CDH3-202ENST00000429102 NMIQ13287 307 aaPredicted RBP14.89□□□□□ -0.03
CDH3-202ENST00000429102 PPP4R3BQ5MIZ7 849 aa14.89□□□□□ -0.03
CDH3-202ENST00000429102 CCDC129Q6ZRS4 1044 aa14.89□□□□□ -0.03
CDH3-202ENST00000429102 SSH3Q8TE77 659 aa14.89□□□□□ -0.03
CDH3-202ENST00000429102 ZNF330Q9Y3S2 320 aaPredicted RBP14.88□□□□□ -0.03
CDH3-202ENST00000429102 RIMBP3CA6NJZ7 1639 aa14.88□□□□□ -0.03
CDH3-202ENST00000429102 RIMBP3BA6NNM3 1639 aa14.88□□□□□ -0.03
CDH3-202ENST00000429102 RIMBP3Q9UFD9 1639 aa14.88□□□□□ -0.03
CDH3-202ENST00000429102 SALL3Q9BXA9 1300 aa14.88□□□□□ -0.03
CDH3-202ENST00000429102 SYTL4Q96C24 671 aaPredicted RBP14.88□□□□□ -0.03
CDH3-202ENST00000429102 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.88□□□□□ -0.03
CDH3-202ENST00000429102 V9GYY5 206 aaPredicted RBP14.88□□□□□ -0.03
CDH3-202ENST00000429102 JAK2O60674 1132 aa14.87□□□□□ -0.03
CDH3-202ENST00000429102 NAA30Q147X3 362 aaPredicted RBP14.87□□□□□ -0.03
CDH3-202ENST00000429102 CCDC186Q7Z3E2 898 aa14.87□□□□□ -0.03
CDH3-202ENST00000429102 RAB11FIP4Q86YS3 637 aa14.87□□□□□ -0.03
CDH3-202ENST00000429102 HYPKQ9NX55 129 aa14.87□□□□□ -0.03
CDH3-202ENST00000429102 MTMR6Q9Y217 621 aa14.87□□□□□ -0.03
CDH3-202ENST00000429102 KIF24Q5T7B8 1368 aa14.87□□□□□ -0.03
CDH3-202ENST00000429102 RPAP1Q9BWH6 1393 aaPredicted RBP14.87□□□□□ -0.03
CDH3-202ENST00000429102 TRHP20396 242 aaPredicted RBP14.87□□□□□ -0.03
CDH3-202ENST00000429102 ESCO1Q5FWF5 840 aa14.87□□□□□ -0.03
CDH3-202ENST00000429102 CHST3Q7LGC8 479 aa14.87□□□□□ -0.03
CDH3-202ENST00000429102 TTC6Q86TZ1 520 aa14.87□□□□□ -0.03
CDH3-202ENST00000429102 ATP6V1DQ9Y5K8 247 aa14.87□□□□□ -0.03
CDH3-202ENST00000429102 DIP2CQ9Y2E4 1556 aa14.87□□□□□ -0.03
CDH3-202ENST00000429102 GLRX3O76003 335 aaKnown RBP14.87□□□□□ -0.03
CDH3-202ENST00000429102 TNMDQ9H2S6 317 aa14.87□□□□□ -0.03
CDH3-202ENST00000429102 ECHDC1Q9NTX5 307 aa14.87□□□□□ -0.03
CDH3-202ENST00000429102 H3BQV1 296 aa14.86□□□□□ -0.03
CDH3-202ENST00000429102 CHAF1AQ13111 956 aaPredicted RBP14.86□□□□□ -0.03
CDH3-202ENST00000429102 IFFO2Q5TF58 517 aa14.86□□□□□ -0.03
CDH3-202ENST00000429102 LARP1Q6PKG0 1096 aaKnown RBP14.86□□□□□ -0.03
CDH3-202ENST00000429102 RIC3Q7Z5B4 369 aa14.86□□□□□ -0.03
CDH3-202ENST00000429102 RUFY2Q8WXA3 655 aa14.86□□□□□ -0.03
CDH3-202ENST00000429102 STAP2Q9UGK3 403 aa14.86□□□□□ -0.03
CDH3-202ENST00000429102 ARHGAP31Q2M1Z3 1444 aa14.86□□□□□ -0.03
CDH3-202ENST00000429102 DYNC1I1O14576 645 aa14.86□□□□□ -0.03
CDH3-202ENST00000429102 PSME1Q06323 249 aa14.86□□□□□ -0.03
CDH3-202ENST00000429102 ZBTB9Q96C00 473 aa14.86□□□□□ -0.03
CDH3-202ENST00000429102 SEC62Q99442 399 aaKnown RBP14.86□□□□□ -0.03
CDH3-202ENST00000429102 FLT4P35916 1363 aa14.86□□□□□ -0.03
CDH3-202ENST00000429102 ANO6Q4KMQ2 910 aa14.86□□□□□ -0.03
CDH3-202ENST00000429102 CREB3L3Q68CJ9 461 aa14.85□□□□□ -0.03
CDH3-202ENST00000429102 BLOC1S2Q6QNY1 142 aa14.85□□□□□ -0.03
CDH3-202ENST00000429102 SPATA32Q96LK8 384 aa14.85□□□□□ -0.03
CDH3-202ENST00000429102 FTOQ9C0B1 505 aaKnown RBP eCLIP14.85□□□□□ -0.03
CDH3-202ENST00000429102 NUP62CLQ9H1M0 184 aa14.85□□□□□ -0.03
CDH3-202ENST00000429102 DNAJC25Q9H1X3 360 aa14.85□□□□□ -0.03
CDH3-202ENST00000429102 KIF3AQ9Y496 699 aa14.85□□□□□ -0.03
CDH3-202ENST00000429102 A0A0D9SFI3 127 aa14.85□□□□□ -0.03
CDH3-202ENST00000429102 CCDC192P0DO97 292 aa14.85□□□□□ -0.03
CDH3-202ENST00000429102 FILIP1Q7Z7B0 1213 aa14.85□□□□□ -0.03
CDH3-202ENST00000429102 EAF2Q96CJ1 260 aaPredicted RBP14.85□□□□□ -0.03
CDH3-202ENST00000429102 GPATCH3Q96I76 525 aa14.85□□□□□ -0.03
CDH3-202ENST00000429102 FMNL2Q96PY5 1086 aa14.85□□□□□ -0.03
CDH3-202ENST00000429102 ATP5J2-PTCD1G3V325 749 aa14.85□□□□□ -0.03
CDH3-202ENST00000429102 PTCD1O75127 700 aaKnown RBP14.85□□□□□ -0.03
CDH3-202ENST00000429102 CCT2P78371 535 aaKnown RBP14.85□□□□□ -0.03
CDH3-202ENST00000429102 MAPK8IP2Q13387 824 aaPredicted RBP14.85□□□□□ -0.03
CDH3-202ENST00000429102 KCNA6P17658 529 aa14.84□□□□□ -0.03
CDH3-202ENST00000429102 KRT85P78386 507 aa14.84□□□□□ -0.03
CDH3-202ENST00000429102 BEND3Q5T5X7 828 aa14.84□□□□□ -0.03
CDH3-202ENST00000429102 PIBF1Q8WXW3 757 aa14.84□□□□□ -0.03
CDH3-202ENST00000429102 NEUROD6Q96NK8 337 aa14.84□□□□□ -0.03
CDH3-202ENST00000429102 CCDC85AQ96PX6 553 aaPredicted RBP14.84□□□□□ -0.03
CDH3-202ENST00000429102 TRMT1Q9NXH9 659 aaKnown RBP14.84□□□□□ -0.03
CDH3-202ENST00000429102 TMEM131LA2VDJ0 1609 aa14.84□□□□□ -0.03
CDH3-202ENST00000429102 PLEKHG3A1L390 1219 aa14.84□□□□□ -0.03
CDH3-202ENST00000429102 RIOK3O14730 519 aaKnown RBP14.84□□□□□ -0.03
CDH3-202ENST00000429102 C1orf141Q5JVX7 400 aa14.84□□□□□ -0.03
CDH3-202ENST00000429102 TTC14Q96N46 770 aa14.84□□□□□ -0.03
CDH3-202ENST00000429102 BICC1Q9H694 974 aaKnown RBP14.84□□□□□ -0.03
CDH3-202ENST00000429102 U2AF2P26368 475 aaKnown RBP eCLIP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms