RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 GOLGA6L3A6NEY3 463 aa16.66■□□□□ 0.26
THBS3-202ENST00000428962 GLRX3O76003 335 aaKnown RBP16.66■□□□□ 0.26
THBS3-202ENST00000428962 ISY1Q9ULR0 285 aaKnown RBP16.66■□□□□ 0.26
THBS3-202ENST00000428962 PDIA6Q15084 440 aa16.65■□□□□ 0.26
THBS3-202ENST00000428962 CWF19L2Q2TBE0 894 aaKnown RBP16.65■□□□□ 0.26
THBS3-202ENST00000428962 RIC3Q7Z5B4 369 aa16.65■□□□□ 0.26
THBS3-202ENST00000428962 UNC5CLQ8IV45 518 aa16.65■□□□□ 0.26
THBS3-202ENST00000428962 JCADQ9P266 1359 aa16.64■□□□□ 0.25
THBS3-202ENST00000428962 SNRPA1P09661 255 aaKnown RBP16.64■□□□□ 0.25
THBS3-202ENST00000428962 SSFA2P28290 1259 aa16.64■□□□□ 0.25
THBS3-202ENST00000428962 SLC39A6Q13433 755 aa16.64■□□□□ 0.25
THBS3-202ENST00000428962 NFATC2IPQ8NCF5 419 aa16.64■□□□□ 0.25
THBS3-202ENST00000428962 CABLES1Q8TDN4 633 aa16.64■□□□□ 0.25
THBS3-202ENST00000428962 LAMB4A4D0S4 1761 aa16.64■□□□□ 0.25
THBS3-202ENST00000428962 NEK4P51957 841 aa16.63■□□□□ 0.25
THBS3-202ENST00000428962 AIMP1Q12904 312 aaKnown RBP16.63■□□□□ 0.25
THBS3-202ENST00000428962 CHRNA2Q15822 529 aa16.63■□□□□ 0.25
THBS3-202ENST00000428962 ILDR2Q71H61 639 aa16.63■□□□□ 0.25
THBS3-202ENST00000428962 FMNL2Q96PY5 1086 aa16.63■□□□□ 0.25
THBS3-202ENST00000428962 BRPF3Q9ULD4 1205 aa16.63■□□□□ 0.25
THBS3-202ENST00000428962 PHLPP1O60346 1717 aa16.63■□□□□ 0.25
THBS3-202ENST00000428962 GZF1Q9H116 711 aaPredicted RBP16.63■□□□□ 0.25
THBS3-202ENST00000428962 AHDC1Q5TGY3 1603 aaPredicted RBP16.63■□□□□ 0.25
THBS3-202ENST00000428962 FSD2A1L4K1 749 aa16.62■□□□□ 0.25
THBS3-202ENST00000428962 IFIT2P09913 472 aaKnown RBP16.62■□□□□ 0.25
THBS3-202ENST00000428962 SUCLG2Q96I99 432 aa16.62■□□□□ 0.25
THBS3-202ENST00000428962 ECHDC1Q9NTX5 307 aa16.62■□□□□ 0.25
THBS3-202ENST00000428962 CYP27B1O15528 508 aa16.61■□□□□ 0.25
THBS3-202ENST00000428962 SGSM2O43147 1006 aa16.61■□□□□ 0.25
THBS3-202ENST00000428962 CYP2E1P05181 493 aaPredicted RBP16.61■□□□□ 0.25
THBS3-202ENST00000428962 RUFY2Q8WXA3 655 aa16.61■□□□□ 0.25
THBS3-202ENST00000428962 ZNF496Q96IT1 587 aaPredicted RBP16.61■□□□□ 0.25
THBS3-202ENST00000428962 METTL22Q9BUU2 404 aaPredicted RBP16.61■□□□□ 0.25
THBS3-202ENST00000428962 RAD50Q92878 1312 aa16.61■□□□□ 0.25
THBS3-202ENST00000428962 BAG4O95429 457 aaKnown RBP16.61■□□□□ 0.25
THBS3-202ENST00000428962 MYL6BP14649 208 aa16.61■□□□□ 0.25
THBS3-202ENST00000428962 HSPA4P34932 840 aa16.61■□□□□ 0.25
THBS3-202ENST00000428962 CABP4P57796 275 aa16.61■□□□□ 0.25
THBS3-202ENST00000428962 KIAA1211Q6ZU35 1233 aa16.61■□□□□ 0.25
THBS3-202ENST00000428962 XAGE3Q8WTP9 111 aa16.61■□□□□ 0.25
THBS3-202ENST00000428962 BICC1Q9H694 974 aaKnown RBP16.61■□□□□ 0.25
THBS3-202ENST00000428962 NEURL1BA8MQ27 555 aa16.6■□□□□ 0.25
THBS3-202ENST00000428962 PRKCSHP14314 528 aaPredicted RBP16.6■□□□□ 0.25
THBS3-202ENST00000428962 G3BP1Q13283 466 aaKnown RBP eCLIP16.6■□□□□ 0.25
THBS3-202ENST00000428962 PALD1Q9ULE6 856 aa16.6■□□□□ 0.25
THBS3-202ENST00000428962 COL16A1Q07092 1604 aaPredicted RBP16.6■□□□□ 0.25
THBS3-202ENST00000428962 MAP4K4O95819 1239 aaPredicted RBP16.59■□□□□ 0.25
THBS3-202ENST00000428962 IGKV5-2P06315 115 aa16.59■□□□□ 0.25
THBS3-202ENST00000428962 COPS6Q7L5N1 327 aa16.59■□□□□ 0.25
THBS3-202ENST00000428962 TMX3Q96JJ7 454 aa16.59■□□□□ 0.25
THBS3-202ENST00000428962 DIAPH3Q9NSV4 1193 aa16.59■□□□□ 0.25
THBS3-202ENST00000428962 WDR17Q8IZU2 1322 aa16.59■□□□□ 0.25
THBS3-202ENST00000428962 PCDH11XQ9BZA7 1347 aa16.59■□□□□ 0.25
THBS3-202ENST00000428962 PCDH11YQ9BZA8 1340 aa16.59■□□□□ 0.25
THBS3-202ENST00000428962 GCKRQ14397 625 aa16.59■□□□□ 0.25
THBS3-202ENST00000428962 INTS4Q96HW7 963 aaKnown RBP16.59■□□□□ 0.25
THBS3-202ENST00000428962 ERBB4Q15303 1308 aa16.58■□□□□ 0.25
THBS3-202ENST00000428962 CUL4AQ13619 759 aa16.58■□□□□ 0.24
THBS3-202ENST00000428962 ANKRD13DQ6ZTN6 518 aa16.58■□□□□ 0.24
THBS3-202ENST00000428962 AACSQ86V21 672 aa16.58■□□□□ 0.24
THBS3-202ENST00000428962 EVI5LQ96CN4 794 aa16.58■□□□□ 0.24
THBS3-202ENST00000428962 MYD88Q99836 296 aa16.58■□□□□ 0.24
THBS3-202ENST00000428962 PRDM11Q9NQV5 511 aa16.58■□□□□ 0.24
THBS3-202ENST00000428962 PA2G4Q9UQ80 394 aaKnown RBP16.58■□□□□ 0.24
THBS3-202ENST00000428962 SPATA31A6Q5VVP1 1343 aa16.58■□□□□ 0.24
THBS3-202ENST00000428962 COL15A1P39059 1388 aa16.58■□□□□ 0.24
THBS3-202ENST00000428962 HIP1O00291 1037 aa16.57■□□□□ 0.24
THBS3-202ENST00000428962 MRE11P49959 708 aa16.57■□□□□ 0.24
THBS3-202ENST00000428962 ZGPATQ8N5A5 531 aaKnown RBP16.57■□□□□ 0.24
THBS3-202ENST00000428962 KAZALD1Q96I82 304 aa16.57■□□□□ 0.24
THBS3-202ENST00000428962 ARFGEF2Q9Y6D5 1785 aa16.57■□□□□ 0.24
THBS3-202ENST00000428962 AFDNP55196 1824 aaKnown RBP16.57■□□□□ 0.24
THBS3-202ENST00000428962 GLI3P10071 1580 aa16.57■□□□□ 0.24
THBS3-202ENST00000428962 SOS2Q07890 1332 aaPredicted RBP16.56■□□□□ 0.24
THBS3-202ENST00000428962 KLHL40Q2TBA0 621 aa16.56■□□□□ 0.24
THBS3-202ENST00000428962 LRP10Q7Z4F1 713 aa16.56■□□□□ 0.24
THBS3-202ENST00000428962 LSG1Q9H089 658 aaKnown RBP16.56■□□□□ 0.24
THBS3-202ENST00000428962 COL5A2P05997 1499 aaPredicted RBP16.55■□□□□ 0.24
THBS3-202ENST00000428962 TOM1L2Q6ZVM7 507 aa16.55■□□□□ 0.24
THBS3-202ENST00000428962 IL25Q9H293 177 aa16.55■□□□□ 0.24
THBS3-202ENST00000428962 USP16Q9Y5T5 823 aa16.55■□□□□ 0.24
THBS3-202ENST00000428962 ABCA3Q99758 1704 aa16.55■□□□□ 0.24
THBS3-202ENST00000428962 CWC27Q6UX04 472 aaKnown RBP16.54■□□□□ 0.24
THBS3-202ENST00000428962 ZCRB1Q8TBF4 217 aaKnown RBP16.54■□□□□ 0.24
THBS3-202ENST00000428962 UBR2Q8IWV8 1755 aa16.54■□□□□ 0.24
THBS3-202ENST00000428962 ERVV-2B6SEH9 535 aa16.54■□□□□ 0.24
THBS3-202ENST00000428962 SASH1O94885 1247 aa16.54■□□□□ 0.24
THBS3-202ENST00000428962 MCTP1Q6DN14 999 aa16.54■□□□□ 0.24
THBS3-202ENST00000428962 PLBD2Q8NHP8 589 aa16.54■□□□□ 0.24
THBS3-202ENST00000428962 DDX49Q9Y6V7 483 aaKnown RBP16.54■□□□□ 0.24
THBS3-202ENST00000428962 PAPPAQ13219 1627 aa16.53■□□□□ 0.24
THBS3-202ENST00000428962 NHSL1Q5SYE7 1610 aa16.53■□□□□ 0.24
THBS3-202ENST00000428962 XRCC6P12956 609 aaKnown RBP eCLIP16.52■□□□□ 0.24
THBS3-202ENST00000428962 PKP1Q13835 747 aa16.52■□□□□ 0.24
THBS3-202ENST00000428962 UPF3BQ9BZI7 483 aaKnown RBP16.52■□□□□ 0.24
THBS3-202ENST00000428962 GRPEL1Q9HAV7 217 aa16.52■□□□□ 0.24
THBS3-202ENST00000428962 RGS17Q9UGC6 210 aaPredicted RBP16.52■□□□□ 0.24
THBS3-202ENST00000428962 SNX14Q9Y5W7 946 aa16.52■□□□□ 0.24
THBS3-202ENST00000428962 EAF2Q96CJ1 260 aaPredicted RBP16.52■□□□□ 0.23
THBS3-202ENST00000428962 CARD10Q9BWT7 1032 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms