RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.48□□□□□ -0.89
LRCH3-204ENST00000428136 TSPY26PQ9H489 355 aa9.48□□□□□ -0.89
LRCH3-204ENST00000428136 HYPKQ9NX55 129 aa9.48□□□□□ -0.89
LRCH3-204ENST00000428136 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.48□□□□□ -0.89
LRCH3-204ENST00000428136 GIGYF1O75420 1035 aaPredicted RBP9.48□□□□□ -0.89
LRCH3-204ENST00000428136 VPS53Q5VIR6 699 aa9.48□□□□□ -0.89
LRCH3-204ENST00000428136 RUFY2Q8WXA3 655 aa9.48□□□□□ -0.89
LRCH3-204ENST00000428136 ZSWIM6Q9HCJ5 1215 aa9.48□□□□□ -0.89
LRCH3-204ENST00000428136 CCDC39Q9UFE4 941 aa9.48□□□□□ -0.89
LRCH3-204ENST00000428136 PXDNQ92626 1479 aa9.48□□□□□ -0.89
LRCH3-204ENST00000428136 GADD45BO75293 160 aaPredicted RBP9.48□□□□□ -0.89
LRCH3-204ENST00000428136 ARHGEF25Q86VW2 580 aa9.48□□□□□ -0.89
LRCH3-204ENST00000428136 FAM184AQ8NB25 1140 aa9.48□□□□□ -0.89
LRCH3-204ENST00000428136 ECHDC1Q9NTX5 307 aa9.48□□□□□ -0.89
LRCH3-204ENST00000428136 TRPM3Q9HCF6 1732 aaPredicted RBP9.47□□□□□ -0.89
LRCH3-204ENST00000428136 LETM1O95202 739 aaPredicted RBP9.47□□□□□ -0.89
LRCH3-204ENST00000428136 MAP4K4O95819 1239 aaPredicted RBP9.47□□□□□ -0.89
LRCH3-204ENST00000428136 TEFQ10587 303 aa9.47□□□□□ -0.89
LRCH3-204ENST00000428136 NECTIN1Q15223 517 aa9.47□□□□□ -0.89
LRCH3-204ENST00000428136 FOXD4L5Q5VV16 416 aaPredicted RBP9.47□□□□□ -0.89
LRCH3-204ENST00000428136 ZNF530Q6P9A1 599 aaPredicted RBP9.47□□□□□ -0.89
LRCH3-204ENST00000428136 KIAA1211Q6ZU35 1233 aa9.47□□□□□ -0.89
LRCH3-204ENST00000428136 CLASRPQ8N2M8 674 aaKnown RBP9.47□□□□□ -0.89
LRCH3-204ENST00000428136 FOXD4L4Q8WXT5 416 aaPredicted RBP9.47□□□□□ -0.89
LRCH3-204ENST00000428136 EVI5LQ96CN4 794 aa9.47□□□□□ -0.89
LRCH3-204ENST00000428136 ZSCAN31Q96LW9 406 aaPredicted RBP9.47□□□□□ -0.89
LRCH3-204ENST00000428136 ALDH8A1Q9H2A2 487 aaPredicted RBP9.47□□□□□ -0.89
LRCH3-204ENST00000428136 STX6O43752 255 aa9.46□□□□□ -0.89
LRCH3-204ENST00000428136 PDIA4P13667 645 aaKnown RBP9.46□□□□□ -0.89
LRCH3-204ENST00000428136 SYT1P21579 422 aa9.46□□□□□ -0.89
LRCH3-204ENST00000428136 SH2B1Q9NRF2 756 aaPredicted RBP9.46□□□□□ -0.89
LRCH3-204ENST00000428136 JCADQ9P266 1359 aa9.46□□□□□ -0.89
LRCH3-204ENST00000428136 CCDC183Q5T5S1 534 aa9.46□□□□□ -0.89
LRCH3-204ENST00000428136 CWC27Q6UX04 472 aaKnown RBP9.46□□□□□ -0.89
LRCH3-204ENST00000428136 MAP3K2Q9Y2U5 619 aa9.46□□□□□ -0.89
LRCH3-204ENST00000428136 ABCC6O95255 1503 aa9.46□□□□□ -0.9
LRCH3-204ENST00000428136 TCHHQ07283 1943 aa9.46□□□□□ -0.9
LRCH3-204ENST00000428136 F13A1P00488 732 aa9.46□□□□□ -0.9
LRCH3-204ENST00000428136 UBE2HP62256 183 aa9.46□□□□□ -0.9
LRCH3-204ENST00000428136 PTH1RQ03431 593 aa9.46□□□□□ -0.9
LRCH3-204ENST00000428136 NOL8Q76FK4 1167 aaKnown RBP9.46□□□□□ -0.9
LRCH3-204ENST00000428136 LINS1Q8NG48 757 aa9.46□□□□□ -0.9
LRCH3-204ENST00000428136 KAZALD1Q96I82 304 aa9.46□□□□□ -0.9
LRCH3-204ENST00000428136 HIP1O00291 1037 aa9.45□□□□□ -0.9
LRCH3-204ENST00000428136 PDIA6Q15084 440 aa9.45□□□□□ -0.9
LRCH3-204ENST00000428136 CSPP1Q1MSJ5 1256 aa9.45□□□□□ -0.9
LRCH3-204ENST00000428136 MPRIPQ6WCQ1 1025 aa9.45□□□□□ -0.9
LRCH3-204ENST00000428136 GPATCH3Q96I76 525 aa9.45□□□□□ -0.9
LRCH3-204ENST00000428136 ATP6V1DQ9Y5K8 247 aa9.45□□□□□ -0.9
LRCH3-204ENST00000428136 PLEKHG2Q9H7P9 1386 aa9.45□□□□□ -0.9
LRCH3-204ENST00000428136 MAP4K1Q92918 833 aa9.45□□□□□ -0.9
LRCH3-204ENST00000428136 LRRC59Q96AG4 307 aaKnown RBP9.45□□□□□ -0.9
LRCH3-204ENST00000428136 DIAPH3Q9NSV4 1193 aa9.45□□□□□ -0.9
LRCH3-204ENST00000428136 SPG7Q9UQ90 795 aa9.45□□□□□ -0.9
LRCH3-204ENST00000428136 GCP02774 474 aa9.44□□□□□ -0.9
LRCH3-204ENST00000428136 PSME1Q06323 249 aa9.44□□□□□ -0.9
LRCH3-204ENST00000428136 PROSER3Q2NL68 480 aa9.44□□□□□ -0.9
LRCH3-204ENST00000428136 ANKLE2Q86XL3 938 aa9.44□□□□□ -0.9
LRCH3-204ENST00000428136 FUCA2Q9BTY2 467 aa9.44□□□□□ -0.9
LRCH3-204ENST00000428136 CCDC171Q6TFL3 1326 aa9.44□□□□□ -0.9
LRCH3-204ENST00000428136 SASH1O94885 1247 aa9.44□□□□□ -0.9
LRCH3-204ENST00000428136 CASTP20810 708 aaKnown RBP9.44□□□□□ -0.9
LRCH3-204ENST00000428136 ST3GAL1Q11201 340 aa9.44□□□□□ -0.9
LRCH3-204ENST00000428136 C1orf141Q5JVX7 400 aa9.44□□□□□ -0.9
LRCH3-204ENST00000428136 DDX21Q9NR30 783 aaKnown RBP eCLIP9.44□□□□□ -0.9
LRCH3-204ENST00000428136 PDRG1Q9NUG6 133 aa9.44□□□□□ -0.9
LRCH3-204ENST00000428136 SMC3Q9UQE7 1217 aa9.44□□□□□ -0.9
LRCH3-204ENST00000428136 MTMR6Q9Y217 621 aa9.44□□□□□ -0.9
LRCH3-204ENST00000428136 CNPY2Q9Y2B0 182 aa9.44□□□□□ -0.9
LRCH3-204ENST00000428136 COL15A1P39059 1388 aa9.44□□□□□ -0.9
LRCH3-204ENST00000428136 GRM8O00222 908 aa9.44□□□□□ -0.9
LRCH3-204ENST00000428136 LARGE1O95461 756 aa9.44□□□□□ -0.9
LRCH3-204ENST00000428136 ANXA1P04083 346 aa9.44□□□□□ -0.9
LRCH3-204ENST00000428136 TSGA10IPQ3SY00 556 aa9.44□□□□□ -0.9
LRCH3-204ENST00000428136 GDPD2Q9HCC8 539 aa9.44□□□□□ -0.9
LRCH3-204ENST00000428136 C9orf78Q9NZ63 289 aaPredicted RBP9.44□□□□□ -0.9
LRCH3-204ENST00000428136 SCN11AQ9UI33 1791 aa9.43□□□□□ -0.9
LRCH3-204ENST00000428136 ADCK5Q3MIX3 580 aa9.43□□□□□ -0.9
LRCH3-204ENST00000428136 CYP46A1Q9Y6A2 500 aa9.43□□□□□ -0.9
LRCH3-204ENST00000428136 IFIT2P09913 472 aaKnown RBP9.43□□□□□ -0.9
LRCH3-204ENST00000428136 HSP90AA2PQ14568 343 aaPredicted RBP9.43□□□□□ -0.9
LRCH3-204ENST00000428136 C14orf37Q86TY3 774 aa9.43□□□□□ -0.9
LRCH3-204ENST00000428136 SUCLG2Q96I99 432 aa9.43□□□□□ -0.9
LRCH3-204ENST00000428136 MED23Q9ULK4 1368 aa9.43□□□□□ -0.9
LRCH3-204ENST00000428136 C5P01031 1676 aa9.43□□□□□ -0.9
LRCH3-204ENST00000428136 NPHP4O75161 1426 aaPredicted RBP9.43□□□□□ -0.9
LRCH3-204ENST00000428136 KIF1AQ12756 1690 aa9.43□□□□□ -0.9
LRCH3-204ENST00000428136 OS9Q13438 667 aaPredicted RBP9.43□□□□□ -0.9
LRCH3-204ENST00000428136 ESCO1Q5FWF5 840 aa9.43□□□□□ -0.9
LRCH3-204ENST00000428136 ANKRD24Q8TF21 1146 aa9.43□□□□□ -0.9
LRCH3-204ENST00000428136 DDX58O95786 925 aaKnown RBP9.42□□□□□ -0.9
LRCH3-204ENST00000428136 GJB2P29033 226 aa9.42□□□□□ -0.9
LRCH3-204ENST00000428136 CWF19L2Q2TBE0 894 aaKnown RBP9.42□□□□□ -0.9
LRCH3-204ENST00000428136 CREB3L3Q68CJ9 461 aa9.42□□□□□ -0.9
LRCH3-204ENST00000428136 PRPF40BQ6NWY9 871 aaKnown RBP9.42□□□□□ -0.9
LRCH3-204ENST00000428136 EAF2Q96CJ1 260 aaPredicted RBP9.42□□□□□ -0.9
LRCH3-204ENST00000428136 JAKMIP1Q96N16 626 aaKnown RBP9.42□□□□□ -0.9
LRCH3-204ENST00000428136 PA2G4Q9UQ80 394 aaKnown RBP9.42□□□□□ -0.9
LRCH3-204ENST00000428136 SETD1BQ9UPS6 1966 aaKnown RBP9.42□□□□□ -0.9
LRCH3-204ENST00000428136 ME3Q16798 604 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms