RNA–Protein interactions for RNA: ENST00000428088.1

AL954642.1-201, humanhuman

TSL 3 BASIC

Gene AL954642.1, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL954642.1-201ENST00000428088 RASSF7Q02833 373 aa25.1■■□□□ 1.61
AL954642.1-201ENST00000428088 NEUROD2Q15784 382 aa25.1■■□□□ 1.61
AL954642.1-201ENST00000428088 HLFQ16534 295 aa25.1■■□□□ 1.61
AL954642.1-201ENST00000428088 PDZRN3Q9UPQ7 1066 aa25.1■■□□□ 1.61
AL954642.1-201ENST00000428088 KIF3CO14782 793 aa25.09■■□□□ 1.61
AL954642.1-201ENST00000428088 WDR43Q15061 677 aaKnown RBP eCLIP25.09■■□□□ 1.61
AL954642.1-201ENST00000428088 NBPF5PQ86XG9 351 aaPredicted RBP25.09■■□□□ 1.61
AL954642.1-201ENST00000428088 PRKRIP1Q9H875 184 aaPredicted RBP25.09■■□□□ 1.61
AL954642.1-201ENST00000428088 NIP7Q9Y221 180 aaKnown RBP eCLIP25.09■■□□□ 1.61
AL954642.1-201ENST00000428088 CCDC88AQ3V6T2 1871 aa25.08■■□□□ 1.61
AL954642.1-201ENST00000428088 CEP350Q5VT06 3117 aa25.07■■□□□ 1.6
AL954642.1-201ENST00000428088 MYL6BP14649 208 aa25.07■■□□□ 1.6
AL954642.1-201ENST00000428088 LMOD3Q0VAK6 560 aa25.07■■□□□ 1.6
AL954642.1-201ENST00000428088 RUNDC1Q96C34 613 aa25.07■■□□□ 1.6
AL954642.1-201ENST00000428088 ADAMTS8Q9UP79 889 aa25.07■■□□□ 1.6
AL954642.1-201ENST00000428088 FAM177BA6PVY3 158 aa25.06■■□□□ 1.6
AL954642.1-201ENST00000428088 ZNF219Q9P2Y4 722 aaPredicted RBP25.06■■□□□ 1.6
AL954642.1-201ENST00000428088 CACNA1SQ13698 1873 aa25.06■■□□□ 1.6
AL954642.1-201ENST00000428088 NUP98P52948 1817 aa25.05■■□□□ 1.6
AL954642.1-201ENST00000428088 RGL2O15211 777 aa25.05■■□□□ 1.6
AL954642.1-201ENST00000428088 NMRK2Q9NPI5 230 aa25.05■■□□□ 1.6
AL954642.1-201ENST00000428088 C21orf2O43822 256 aa25.04■■□□□ 1.6
AL954642.1-201ENST00000428088 PRELPP51888 382 aa25.04■■□□□ 1.6
AL954642.1-201ENST00000428088 TTLL7Q6ZT98 887 aa25.04■■□□□ 1.6
AL954642.1-201ENST00000428088 SRGNP10124 158 aa25.03■■□□□ 1.6
AL954642.1-201ENST00000428088 TPTE2Q6XPS3 522 aa25.03■■□□□ 1.6
AL954642.1-201ENST00000428088 BABAM1Q9NWV8 329 aa25.03■■□□□ 1.6
AL954642.1-201ENST00000428088 SLX4Q8IY92 1834 aa25.02■■□□□ 1.6
AL954642.1-201ENST00000428088 ERVV-1B6SEH8 477 aa25.02■■□□□ 1.6
AL954642.1-201ENST00000428088 NFKBIEO00221 500 aa25.02■■□□□ 1.6
AL954642.1-201ENST00000428088 EIF2S2P20042 333 aaKnown RBP25.02■■□□□ 1.6
AL954642.1-201ENST00000428088 LMNB1P20700 586 aa25.02■■□□□ 1.6
AL954642.1-201ENST00000428088 STYK1Q6J9G0 422 aa25.02■■□□□ 1.6
AL954642.1-201ENST00000428088 KIF6Q6ZMV9 814 aa25.02■■□□□ 1.6
AL954642.1-201ENST00000428088 MASTLQ96GX5 879 aa25.02■■□□□ 1.6
AL954642.1-201ENST00000428088 TRIM35Q9UPQ4 493 aa25.02■■□□□ 1.6
AL954642.1-201ENST00000428088 MAP3K15Q6ZN16 1313 aa25.02■■□□□ 1.6
AL954642.1-201ENST00000428088 CNKSR1Q969H4 720 aa25.01■■□□□ 1.59
AL954642.1-201ENST00000428088 ZBTB3Q9H5J0 574 aa25■■□□□ 1.59
AL954642.1-201ENST00000428088 ERBB4Q15303 1308 aa24.99■■□□□ 1.59
AL954642.1-201ENST00000428088 FER1L6Q2WGJ9 1857 aa24.99■■□□□ 1.59
AL954642.1-201ENST00000428088 PRPF40BQ6NWY9 871 aaKnown RBP24.99■■□□□ 1.59
AL954642.1-201ENST00000428088 LAS1LQ9Y4W2 734 aaKnown RBP24.99■■□□□ 1.59
AL954642.1-201ENST00000428088 KDM2BQ8NHM5 1336 aa24.98■■□□□ 1.59
AL954642.1-201ENST00000428088 GTF2E1P29083 439 aaPredicted RBP24.98■■□□□ 1.59
AL954642.1-201ENST00000428088 PDIA6Q15084 440 aa24.98■■□□□ 1.59
AL954642.1-201ENST00000428088 ARFGEF2Q9Y6D5 1785 aa24.98■■□□□ 1.59
AL954642.1-201ENST00000428088 CHL1O00533 1208 aa24.97■■□□□ 1.59
AL954642.1-201ENST00000428088 TOMM70O94826 608 aa24.97■■□□□ 1.59
AL954642.1-201ENST00000428088 NECTIN2Q92692 538 aa24.97■■□□□ 1.59
AL954642.1-201ENST00000428088 KLRG2A4D1S0 409 aaPredicted RBP24.96■■□□□ 1.59
AL954642.1-201ENST00000428088 ANXA1P04083 346 aa24.96■■□□□ 1.59
AL954642.1-201ENST00000428088 NPR1P16066 1061 aa24.96■■□□□ 1.59
AL954642.1-201ENST00000428088 GPTP24298 496 aa24.96■■□□□ 1.59
AL954642.1-201ENST00000428088 PROSER3Q2NL68 480 aa24.96■■□□□ 1.59
AL954642.1-201ENST00000428088 NUTM1Q86Y26 1132 aa24.96■■□□□ 1.59
AL954642.1-201ENST00000428088 RRAGCQ9HB90 399 aa24.96■■□□□ 1.59
AL954642.1-201ENST00000428088 HSPA6P17066 643 aa24.95■■□□□ 1.58
AL954642.1-201ENST00000428088 ZEB1P37275 1124 aaPredicted RBP24.95■■□□□ 1.58
AL954642.1-201ENST00000428088 KRT24Q2M2I5 525 aa24.95■■□□□ 1.58
AL954642.1-201ENST00000428088 LRP10Q7Z4F1 713 aa24.95■■□□□ 1.58
AL954642.1-201ENST00000428088 TIAM2Q8IVF5 1701 aa24.95■■□□□ 1.58
AL954642.1-201ENST00000428088 UBN2Q6ZU65 1347 aa24.94■■□□□ 1.58
AL954642.1-201ENST00000428088 ZC3H4Q9UPT8 1303 aaKnown RBP24.94■■□□□ 1.58
AL954642.1-201ENST00000428088 NYXQ9GZU5 481 aa24.94■■□□□ 1.58
AL954642.1-201ENST00000428088 DICER1Q9UPY3 1922 aaKnown RBP24.93■■□□□ 1.58
AL954642.1-201ENST00000428088 ERFEQ4G0M1 354 aa24.93■■□□□ 1.58
AL954642.1-201ENST00000428088 GIGYF2Q6Y7W6 1299 aaKnown RBP24.93■■□□□ 1.58
AL954642.1-201ENST00000428088 TNRC6CQ9HCJ0 1690 aaKnown RBP24.92■■□□□ 1.58
AL954642.1-201ENST00000428088 SUSD4Q5VX71 490 aa24.92■■□□□ 1.58
AL954642.1-201ENST00000428088 C16orf71Q8IYS4 520 aaPredicted RBP24.92■■□□□ 1.58
AL954642.1-201ENST00000428088 ZNF34Q8IZ26 560 aa24.92■■□□□ 1.58
AL954642.1-201ENST00000428088 TAOK3Q9H2K8 898 aa24.92■■□□□ 1.58
AL954642.1-201ENST00000428088 ABCC12Q96J65 1359 aa24.92■■□□□ 1.58
AL954642.1-201ENST00000428088 GLTPD2A6NH11 291 aa24.91■■□□□ 1.58
AL954642.1-201ENST00000428088 SOGA3Q5TF21 947 aa24.91■■□□□ 1.58
AL954642.1-201ENST00000428088 C7orf43Q8WVR3 580 aa24.91■■□□□ 1.58
AL954642.1-201ENST00000428088 APAF1O14727 1248 aa24.9■■□□□ 1.58
AL954642.1-201ENST00000428088 AIMP1Q12904 312 aaKnown RBP24.9■■□□□ 1.58
AL954642.1-201ENST00000428088 LTBP3Q9NS15 1303 aa24.89■■□□□ 1.58
AL954642.1-201ENST00000428088 COPS6Q7L5N1 327 aa24.89■■□□□ 1.58
AL954642.1-201ENST00000428088 ALDH1B1P30837 517 aa24.88■■□□□ 1.57
AL954642.1-201ENST00000428088 OLFM4Q6UX06 510 aa24.88■■□□□ 1.57
AL954642.1-201ENST00000428088 RBM46Q8TBY0 533 aaKnown RBP24.88■■□□□ 1.57
AL954642.1-201ENST00000428088 XAGE3Q8WTP9 111 aa24.88■■□□□ 1.57
AL954642.1-201ENST00000428088 CFAP44Q96MT7 982 aa24.88■■□□□ 1.57
AL954642.1-201ENST00000428088 NTSR2O95665 410 aa24.87■■□□□ 1.57
AL954642.1-201ENST00000428088 CCDC184Q52MB2 194 aa24.87■■□□□ 1.57
AL954642.1-201ENST00000428088 CCDC93Q567U6 631 aa24.87■■□□□ 1.57
AL954642.1-201ENST00000428088 DDX21Q9NR30 783 aaKnown RBP eCLIP24.87■■□□□ 1.57
AL954642.1-201ENST00000428088 IBTKQ9P2D0 1353 aaPredicted RBP24.87■■□□□ 1.57
AL954642.1-201ENST00000428088 CRY2Q49AN0 593 aa24.86■■□□□ 1.57
AL954642.1-201ENST00000428088 PPP1R42Q7Z4L9 355 aa24.86■■□□□ 1.57
AL954642.1-201ENST00000428088 PARP10Q53GL7 1025 aa24.85■■□□□ 1.57
AL954642.1-201ENST00000428088 HDGFL1Q5TGJ6 251 aa24.85■■□□□ 1.57
AL954642.1-201ENST00000428088 DPY19L2Q6NUT2 758 aa24.85■■□□□ 1.57
AL954642.1-201ENST00000428088 MBIPQ9NS73 344 aa24.85■■□□□ 1.57
AL954642.1-201ENST00000428088 CHPF2Q9P2E5 772 aa24.85■■□□□ 1.57
AL954642.1-201ENST00000428088 RPGRQ92834 1020 aaKnown RBP24.84■■□□□ 1.57
AL954642.1-201ENST00000428088 ANKRD36CQ5JPF3 1778 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms