RNA–Protein interactions for RNA: ENST00000428007.1

PAICSP3-201, Transcript of phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 3, humanhuman

BASIC

Gene PAICSP3, Length 1,168 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAICSP3-201ENST00000428007 LRP5O75197 1615 aa11.55□□□□□ -0.56
PAICSP3-201ENST00000428007 C4BP0C0L5 1744 aa11.55□□□□□ -0.56
PAICSP3-201ENST00000428007 GIGYF1O75420 1035 aaPredicted RBP11.54□□□□□ -0.56
PAICSP3-201ENST00000428007 EIF5P55010 431 aaKnown RBP11.54□□□□□ -0.56
PAICSP3-201ENST00000428007 DCTN1Q14203 1278 aa11.54□□□□□ -0.56
PAICSP3-201ENST00000428007 INTS5Q6P9B9 1019 aaKnown RBP11.54□□□□□ -0.56
PAICSP3-201ENST00000428007 ARHGEF1Q92888 912 aaKnown RBP11.54□□□□□ -0.56
PAICSP3-201ENST00000428007 ZNF652Q9Y2D9 606 aa11.54□□□□□ -0.56
PAICSP3-201ENST00000428007 KCPQ6ZWJ8 1503 aa11.54□□□□□ -0.56
PAICSP3-201ENST00000428007 KCNQ4P56696 695 aa11.53□□□□□ -0.56
PAICSP3-201ENST00000428007 WWC1Q8IX03 1113 aa11.53□□□□□ -0.56
PAICSP3-201ENST00000428007 ARXQ96QS3 562 aa11.53□□□□□ -0.56
PAICSP3-201ENST00000428007 NARFQ9UHQ1 456 aa11.53□□□□□ -0.56
PAICSP3-201ENST00000428007 PDZRN3Q9UPQ7 1066 aa11.53□□□□□ -0.56
PAICSP3-201ENST00000428007 ZNF853P0CG23 659 aa11.52□□□□□ -0.57
PAICSP3-201ENST00000428007 FAM9BQ8IZU0 186 aa11.52□□□□□ -0.57
PAICSP3-201ENST00000428007 MYH16Q9H6N6 1097 aa11.52□□□□□ -0.57
PAICSP3-201ENST00000428007 CD2APQ9Y5K6 639 aa11.52□□□□□ -0.57
PAICSP3-201ENST00000428007 SIPA1L3O60292 1781 aaPredicted RBP11.51□□□□□ -0.57
PAICSP3-201ENST00000428007 UBR2Q8IWV8 1755 aa11.51□□□□□ -0.57
PAICSP3-201ENST00000428007 TAF1LQ8IZX4 1826 aa11.51□□□□□ -0.57
PAICSP3-201ENST00000428007 ERVV-1B6SEH8 477 aa11.51□□□□□ -0.57
PAICSP3-201ENST00000428007 ZBTB7AO95365 584 aa11.51□□□□□ -0.57
PAICSP3-201ENST00000428007 CD44P16070 742 aaKnown RBP11.51□□□□□ -0.57
PAICSP3-201ENST00000428007 PHF14O94880 888 aa11.5□□□□□ -0.57
PAICSP3-201ENST00000428007 PTGER2P43116 358 aa11.5□□□□□ -0.57
PAICSP3-201ENST00000428007 CCDC184Q52MB2 194 aa11.5□□□□□ -0.57
PAICSP3-201ENST00000428007 RRP7AQ9Y3A4 280 aaKnown RBP11.5□□□□□ -0.57
PAICSP3-201ENST00000428007 USP16Q9Y5T5 823 aa11.5□□□□□ -0.57
PAICSP3-201ENST00000428007 PARP3Q9Y6F1 533 aa11.5□□□□□ -0.57
PAICSP3-201ENST00000428007 USP42Q9H9J4 1324 aaKnown RBP11.5□□□□□ -0.57
PAICSP3-201ENST00000428007 COL15A1P39059 1388 aa11.5□□□□□ -0.57
PAICSP3-201ENST00000428007 CASZ1Q86V15 1759 aa11.49□□□□□ -0.57
PAICSP3-201ENST00000428007 GYS1P13807 737 aa11.49□□□□□ -0.57
PAICSP3-201ENST00000428007 CANXP27824 592 aaKnown RBP11.49□□□□□ -0.57
PAICSP3-201ENST00000428007 GOLGA2Q08379 1002 aa11.49□□□□□ -0.57
PAICSP3-201ENST00000428007 ZNF428Q96B54 188 aa11.49□□□□□ -0.57
PAICSP3-201ENST00000428007 DBF4Q9UBU7 674 aaPredicted RBP11.49□□□□□ -0.57
PAICSP3-201ENST00000428007 TRPC6Q9Y210 931 aa11.49□□□□□ -0.57
PAICSP3-201ENST00000428007 ZBTB1Q9Y2K1 713 aa11.49□□□□□ -0.57
PAICSP3-201ENST00000428007 LAS1LQ9Y4W2 734 aaKnown RBP11.49□□□□□ -0.57
PAICSP3-201ENST00000428007 COL5A3P25940 1745 aaPredicted RBP11.49□□□□□ -0.57
PAICSP3-201ENST00000428007 TGFB2P61812 414 aa11.48□□□□□ -0.57
PAICSP3-201ENST00000428007 HSP90AB3PQ58FF7 597 aa11.48□□□□□ -0.57
PAICSP3-201ENST00000428007 CCDC30Q5VVM6 783 aa11.48□□□□□ -0.57
PAICSP3-201ENST00000428007 DDX21Q9NR30 783 aaKnown RBP eCLIP11.48□□□□□ -0.57
PAICSP3-201ENST00000428007 HYPKQ9NX55 129 aa11.48□□□□□ -0.57
PAICSP3-201ENST00000428007 MIS18AQ9NYP9 233 aa11.48□□□□□ -0.57
PAICSP3-201ENST00000428007 VIRMAQ69YN4 1812 aaKnown RBP11.48□□□□□ -0.57
PAICSP3-201ENST00000428007 DLG5Q8TDM6 1919 aa11.47□□□□□ -0.57
PAICSP3-201ENST00000428007 KCNQ3O43525 872 aa11.47□□□□□ -0.57
PAICSP3-201ENST00000428007 A1BGP04217 495 aa11.47□□□□□ -0.57
PAICSP3-201ENST00000428007 KIF6Q6ZMV9 814 aa11.47□□□□□ -0.57
PAICSP3-201ENST00000428007 DZIP3Q86Y13 1208 aaKnown RBP11.47□□□□□ -0.57
PAICSP3-201ENST00000428007 MS4A4AQ96JQ5 239 aa11.47□□□□□ -0.57
PAICSP3-201ENST00000428007 THUMPD2Q9BTF0 503 aaKnown RBP11.47□□□□□ -0.57
PAICSP3-201ENST00000428007 MBIPQ9NS73 344 aa11.47□□□□□ -0.57
PAICSP3-201ENST00000428007 UBR3Q6ZT12 1888 aa11.46□□□□□ -0.57
PAICSP3-201ENST00000428007 E9PSI1 815 aa11.46□□□□□ -0.57
PAICSP3-201ENST00000428007 CT47B1P0C2W7 299 aaPredicted RBP11.46□□□□□ -0.57
PAICSP3-201ENST00000428007 HSP90B1P14625 803 aaKnown RBP11.46□□□□□ -0.57
PAICSP3-201ENST00000428007 TM4SF1P30408 202 aa11.46□□□□□ -0.57
PAICSP3-201ENST00000428007 SETDB2Q96T68 719 aa11.46□□□□□ -0.57
PAICSP3-201ENST00000428007 TJP1Q07157 1748 aa11.46□□□□□ -0.58
PAICSP3-201ENST00000428007 RNF123Q5XPI4 1314 aa11.45□□□□□ -0.58
PAICSP3-201ENST00000428007 DDX58O95786 925 aaKnown RBP11.45□□□□□ -0.58
PAICSP3-201ENST00000428007 MMP10P09238 476 aa11.45□□□□□ -0.58
PAICSP3-201ENST00000428007 PARP10Q53GL7 1025 aa11.45□□□□□ -0.58
PAICSP3-201ENST00000428007 HDGFL1Q5TGJ6 251 aa11.45□□□□□ -0.58
PAICSP3-201ENST00000428007 DUSP27Q5VZP5 1158 aa11.45□□□□□ -0.58
PAICSP3-201ENST00000428007 USPL1Q5W0Q7 1092 aa11.45□□□□□ -0.58
PAICSP3-201ENST00000428007 TPTE2Q6XPS3 522 aa11.45□□□□□ -0.58
PAICSP3-201ENST00000428007 SYT17Q9BSW7 474 aa11.45□□□□□ -0.58
PAICSP3-201ENST00000428007 STK31Q9BXU1 1019 aa11.45□□□□□ -0.58
PAICSP3-201ENST00000428007 PDGFDQ9GZP0 370 aaPredicted RBP11.45□□□□□ -0.58
PAICSP3-201ENST00000428007 NYXQ9GZU5 481 aa11.45□□□□□ -0.58
PAICSP3-201ENST00000428007 KDM3BQ7LBC6 1761 aa11.45□□□□□ -0.58
PAICSP3-201ENST00000428007 COL24A1Q17RW2 1714 aa11.45□□□□□ -0.58
PAICSP3-201ENST00000428007 GRIN3BO60391 1043 aa11.44□□□□□ -0.58
PAICSP3-201ENST00000428007 CARMIL3Q8ND23 1372 aa11.43□□□□□ -0.58
PAICSP3-201ENST00000428007 MAP3K15Q6ZN16 1313 aa11.43□□□□□ -0.58
PAICSP3-201ENST00000428007 EIF2S2P20042 333 aaKnown RBP11.43□□□□□ -0.58
PAICSP3-201ENST00000428007 FHDC1Q9C0D6 1143 aaPredicted RBP11.43□□□□□ -0.58
PAICSP3-201ENST00000428007 ZNF330Q9Y3S2 320 aaPredicted RBP11.43□□□□□ -0.58
PAICSP3-201ENST00000428007 NBPF26B4DH59 902 aa11.42□□□□□ -0.58
PAICSP3-201ENST00000428007 CAMTA2O94983 1202 aa11.42□□□□□ -0.58
PAICSP3-201ENST00000428007 PDE6BP35913 854 aa11.42□□□□□ -0.58
PAICSP3-201ENST00000428007 ST5P78524 1137 aa11.42□□□□□ -0.58
PAICSP3-201ENST00000428007 TWISTNBQ3B726 338 aaPredicted RBP11.42□□□□□ -0.58
PAICSP3-201ENST00000428007 NBPF10Q6P3W6 841 aaKnown RBP11.42□□□□□ -0.58
PAICSP3-201ENST00000428007 GIGYF2Q6Y7W6 1299 aaKnown RBP11.42□□□□□ -0.58
PAICSP3-201ENST00000428007 PPP1R42Q7Z4L9 355 aa11.42□□□□□ -0.58
PAICSP3-201ENST00000428007 NBPF15Q8N660 670 aa11.42□□□□□ -0.58
PAICSP3-201ENST00000428007 MYH14Q7Z406 1995 aaKnown RBP11.41□□□□□ -0.58
PAICSP3-201ENST00000428007 ZNF521Q96K83 1311 aa11.41□□□□□ -0.58
PAICSP3-201ENST00000428007 POLRMTO00411 1230 aaKnown RBP11.41□□□□□ -0.58
PAICSP3-201ENST00000428007 NPHP1O15259 732 aa11.41□□□□□ -0.58
PAICSP3-201ENST00000428007 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.41□□□□□ -0.58
PAICSP3-201ENST00000428007 AMIGO3Q86WK7 504 aa11.41□□□□□ -0.58
PAICSP3-201ENST00000428007 PLBD2Q8NHP8 589 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms