RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 CHRM1P11229 460 aaPredicted RBP12.15□□□□□ -0.46
RFX3-AS1-202ENST00000427722 DDR1Q08345 913 aa12.15□□□□□ -0.46
RFX3-AS1-202ENST00000427722 TAF7Q15545 349 aaPredicted RBP12.15□□□□□ -0.46
RFX3-AS1-202ENST00000427722 CIZ1Q9ULV3 898 aaPredicted RBP12.15□□□□□ -0.46
RFX3-AS1-202ENST00000427722 RRP7AQ9Y3A4 280 aaKnown RBP12.15□□□□□ -0.46
RFX3-AS1-202ENST00000427722 PARP3Q9Y6F1 533 aa12.15□□□□□ -0.46
RFX3-AS1-202ENST00000427722 C4AP0C0L4 1744 aa12.14□□□□□ -0.47
RFX3-AS1-202ENST00000427722 A1BGP04217 495 aa12.14□□□□□ -0.47
RFX3-AS1-202ENST00000427722 SNRPA1P09661 255 aaKnown RBP12.14□□□□□ -0.47
RFX3-AS1-202ENST00000427722 YBX3P16989 372 aaKnown RBP eCLIP12.14□□□□□ -0.47
RFX3-AS1-202ENST00000427722 PIP4K2AP48426 406 aaPredicted RBP12.14□□□□□ -0.47
RFX3-AS1-202ENST00000427722 RIPK4P57078 832 aa12.14□□□□□ -0.47
RFX3-AS1-202ENST00000427722 NARFQ9UHQ1 456 aa12.14□□□□□ -0.47
RFX3-AS1-202ENST00000427722 METRNQ9UJH8 293 aa12.14□□□□□ -0.47
RFX3-AS1-202ENST00000427722 MYH14Q7Z406 1995 aaKnown RBP12.14□□□□□ -0.47
RFX3-AS1-202ENST00000427722 SIPA1L3O60292 1781 aaPredicted RBP12.13□□□□□ -0.47
RFX3-AS1-202ENST00000427722 TMPOP42166 694 aaKnown RBP12.13□□□□□ -0.47
RFX3-AS1-202ENST00000427722 EIF5P55010 431 aaKnown RBP12.13□□□□□ -0.47
RFX3-AS1-202ENST00000427722 LMOD3Q0VAK6 560 aa12.13□□□□□ -0.47
RFX3-AS1-202ENST00000427722 NEUROD2Q15784 382 aa12.13□□□□□ -0.47
RFX3-AS1-202ENST00000427722 NPM2Q86SE8 214 aaKnown RBP12.13□□□□□ -0.47
RFX3-AS1-202ENST00000427722 PNISRQ8TF01 805 aaKnown RBP12.13□□□□□ -0.47
RFX3-AS1-202ENST00000427722 PCDHB8Q9UN66 801 aa12.13□□□□□ -0.47
RFX3-AS1-202ENST00000427722 ADAMTS8Q9UP79 889 aa12.13□□□□□ -0.47
RFX3-AS1-202ENST00000427722 PXDNLA1KZ92 1463 aa12.13□□□□□ -0.47
RFX3-AS1-202ENST00000427722 A0A087WZG4 1122 aa12.12□□□□□ -0.47
RFX3-AS1-202ENST00000427722 IL6STP40189 918 aaPredicted RBP12.12□□□□□ -0.47
RFX3-AS1-202ENST00000427722 NFIXQ14938 502 aa12.12□□□□□ -0.47
RFX3-AS1-202ENST00000427722 RUNDC1Q96C34 613 aa12.12□□□□□ -0.47
RFX3-AS1-202ENST00000427722 BCL2L12Q9HB09 334 aa12.12□□□□□ -0.47
RFX3-AS1-202ENST00000427722 USP16Q9Y5T5 823 aa12.12□□□□□ -0.47
RFX3-AS1-202ENST00000427722 POLRMTO00411 1230 aaKnown RBP12.11□□□□□ -0.47
RFX3-AS1-202ENST00000427722 BICDL1Q6ZP65 573 aa12.11□□□□□ -0.47
RFX3-AS1-202ENST00000427722 TSPYL4Q9UJ04 414 aa12.11□□□□□ -0.47
RFX3-AS1-202ENST00000427722 TBC1D2BQ9UPU7 963 aa12.11□□□□□ -0.47
RFX3-AS1-202ENST00000427722 VIRMAQ69YN4 1812 aaKnown RBP12.1□□□□□ -0.47
RFX3-AS1-202ENST00000427722 POTEB2H3BUK9 544 aa12.1□□□□□ -0.47
RFX3-AS1-202ENST00000427722 GRIN3BO60391 1043 aa12.1□□□□□ -0.47
RFX3-AS1-202ENST00000427722 EIF4A1P60842 406 aaKnown RBP12.1□□□□□ -0.47
RFX3-AS1-202ENST00000427722 TMEM106CQ9BVX2 250 aa12.1□□□□□ -0.47
RFX3-AS1-202ENST00000427722 A0A0G2JLW4 131 aa12.09□□□□□ -0.47
RFX3-AS1-202ENST00000427722 NBPF26B4DH59 902 aa12.09□□□□□ -0.47
RFX3-AS1-202ENST00000427722 ANP32CO43423 234 aa12.09□□□□□ -0.47
RFX3-AS1-202ENST00000427722 CAMTA2O94983 1202 aa12.09□□□□□ -0.47
RFX3-AS1-202ENST00000427722 DPEP1P16444 411 aa12.09□□□□□ -0.47
RFX3-AS1-202ENST00000427722 TM4SF1P30408 202 aa12.09□□□□□ -0.47
RFX3-AS1-202ENST00000427722 CCDC184Q52MB2 194 aa12.09□□□□□ -0.47
RFX3-AS1-202ENST00000427722 NBPF10Q6P3W6 841 aaKnown RBP12.09□□□□□ -0.47
RFX3-AS1-202ENST00000427722 DZIP3Q86Y13 1208 aaKnown RBP12.09□□□□□ -0.47
RFX3-AS1-202ENST00000427722 NBPF15Q8N660 670 aa12.09□□□□□ -0.47
RFX3-AS1-202ENST00000427722 GIGYF1O75420 1035 aaPredicted RBP12.08□□□□□ -0.48
RFX3-AS1-202ENST00000427722 TGFB2P61812 414 aa12.08□□□□□ -0.48
RFX3-AS1-202ENST00000427722 TBC1D9BQ66K14 1250 aa12.08□□□□□ -0.48
RFX3-AS1-202ENST00000427722 TRIM35Q9UPQ4 493 aa12.08□□□□□ -0.48
RFX3-AS1-202ENST00000427722 SERPINB2P05120 415 aa12.07□□□□□ -0.48
RFX3-AS1-202ENST00000427722 CHRNA5P30532 468 aa12.07□□□□□ -0.48
RFX3-AS1-202ENST00000427722 ZNF467Q7Z7K2 595 aaPredicted RBP12.07□□□□□ -0.48
RFX3-AS1-202ENST00000427722 BCS1LQ9Y276 419 aa12.07□□□□□ -0.48
RFX3-AS1-202ENST00000427722 SCN7AQ01118 1682 aa12.06□□□□□ -0.48
RFX3-AS1-202ENST00000427722 CARMIL3Q8ND23 1372 aa12.06□□□□□ -0.48
RFX3-AS1-202ENST00000427722 APAF1O14727 1248 aa12.06□□□□□ -0.48
RFX3-AS1-202ENST00000427722 NGEFQ8N5V2 710 aa12.06□□□□□ -0.48
RFX3-AS1-202ENST00000427722 MRS2Q9HD23 443 aa12.06□□□□□ -0.48
RFX3-AS1-202ENST00000427722 LAS1LQ9Y4W2 734 aaKnown RBP12.06□□□□□ -0.48
RFX3-AS1-202ENST00000427722 UTRNP46939 3433 aa12.05□□□□□ -0.48
RFX3-AS1-202ENST00000427722 NPHP1O15259 732 aa12.05□□□□□ -0.48
RFX3-AS1-202ENST00000427722 ZNF652Q9Y2D9 606 aa12.05□□□□□ -0.48
RFX3-AS1-202ENST00000427722 KDM3BQ7LBC6 1761 aa12.05□□□□□ -0.48
RFX3-AS1-202ENST00000427722 GOLGB1Q14789 3259 aaKnown RBP12.04□□□□□ -0.48
RFX3-AS1-202ENST00000427722 MYL6BP14649 208 aa12.04□□□□□ -0.48
RFX3-AS1-202ENST00000427722 CCDC24Q8N4L8 307 aa12.04□□□□□ -0.48
RFX3-AS1-202ENST00000427722 CNBD1Q8NA66 436 aa12.04□□□□□ -0.48
RFX3-AS1-202ENST00000427722 ZNF784Q8NCA9 323 aaPredicted RBP12.04□□□□□ -0.48
RFX3-AS1-202ENST00000427722 SETDB2Q96T68 719 aa12.04□□□□□ -0.48
RFX3-AS1-202ENST00000427722 BABAM1Q9NWV8 329 aa12.04□□□□□ -0.48
RFX3-AS1-202ENST00000427722 SENP3-EIF4A1A0A087X0R7 540 aa12.03□□□□□ -0.48
RFX3-AS1-202ENST00000427722 CHL1O00533 1208 aa12.03□□□□□ -0.48
RFX3-AS1-202ENST00000427722 EIF2S2P20042 333 aaKnown RBP12.03□□□□□ -0.48
RFX3-AS1-202ENST00000427722 KCNA3P22001 575 aa12.03□□□□□ -0.48
RFX3-AS1-202ENST00000427722 KRT24Q2M2I5 525 aa12.03□□□□□ -0.48
RFX3-AS1-202ENST00000427722 DALRD3Q5D0E6 543 aaKnown RBP12.03□□□□□ -0.48
RFX3-AS1-202ENST00000427722 PRR5LQ6MZQ0 368 aa12.03□□□□□ -0.48
RFX3-AS1-202ENST00000427722 KIF6Q6ZMV9 814 aa12.03□□□□□ -0.48
RFX3-AS1-202ENST00000427722 NECTIN2Q92692 538 aa12.03□□□□□ -0.48
RFX3-AS1-202ENST00000427722 PIM2Q9P1W9 311 aa12.03□□□□□ -0.48
RFX3-AS1-202ENST00000427722 DLG5Q8TDM6 1919 aa12.03□□□□□ -0.48
RFX3-AS1-202ENST00000427722 POTEFA5A3E0 1075 aa12.02□□□□□ -0.49
RFX3-AS1-202ENST00000427722 IER5LQ5T953 404 aa12.02□□□□□ -0.49
RFX3-AS1-202ENST00000427722 TTLL7Q6ZT98 887 aa12.02□□□□□ -0.49
RFX3-AS1-202ENST00000427722 NBPF5PQ86XG9 351 aaPredicted RBP12.02□□□□□ -0.49
RFX3-AS1-202ENST00000427722 C2CD5Q86YS7 1000 aa12.02□□□□□ -0.49
RFX3-AS1-202ENST00000427722 ERBB4Q15303 1308 aa12.02□□□□□ -0.49
RFX3-AS1-202ENST00000427722 KIAA1551Q9HCM1 1747 aa12.02□□□□□ -0.49
RFX3-AS1-202ENST00000427722 LAMB4A4D0S4 1761 aa12.02□□□□□ -0.49
RFX3-AS1-202ENST00000427722 ANXA1P04083 346 aa12.01□□□□□ -0.49
RFX3-AS1-202ENST00000427722 ST5P78524 1137 aa12.01□□□□□ -0.49
RFX3-AS1-202ENST00000427722 HLFQ16534 295 aa12.01□□□□□ -0.49
RFX3-AS1-202ENST00000427722 PROSER3Q2NL68 480 aa12.01□□□□□ -0.49
RFX3-AS1-202ENST00000427722 CLEC4GQ6UXB4 293 aa12.01□□□□□ -0.49
RFX3-AS1-202ENST00000427722 ARHGAP27Q6ZUM4 889 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms