RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 MRC1P22897 1456 aa10.55□□□□□ -0.72
SMARCAL1-206ENST00000427645 KDM3BQ7LBC6 1761 aa10.54□□□□□ -0.72
SMARCAL1-206ENST00000427645 BCAR3O75815 825 aa10.54□□□□□ -0.72
SMARCAL1-206ENST00000427645 RFC4P35249 363 aa10.54□□□□□ -0.72
SMARCAL1-206ENST00000427645 MKRN4PQ13434 485 aaPredicted RBP10.54□□□□□ -0.72
SMARCAL1-206ENST00000427645 PDE3AQ14432 1141 aa10.54□□□□□ -0.72
SMARCAL1-206ENST00000427645 NLGN1Q8N2Q7 840 aa10.54□□□□□ -0.72
SMARCAL1-206ENST00000427645 SSH1Q8WYL5 1049 aa10.54□□□□□ -0.72
SMARCAL1-206ENST00000427645 ARHGAP45Q92619 1136 aa10.54□□□□□ -0.72
SMARCAL1-206ENST00000427645 FMNL2Q96PY5 1086 aa10.54□□□□□ -0.72
SMARCAL1-206ENST00000427645 STK31Q9BXU1 1019 aa10.54□□□□□ -0.72
SMARCAL1-206ENST00000427645 SMC4Q9NTJ3 1288 aa10.54□□□□□ -0.72
SMARCAL1-206ENST00000427645 GTF3C3Q9Y5Q9 886 aa10.54□□□□□ -0.72
SMARCAL1-206ENST00000427645 CICQ96RK0 1608 aaPredicted RBP10.54□□□□□ -0.72
SMARCAL1-206ENST00000427645 KIF16BQ96L93 1317 aa10.54□□□□□ -0.72
SMARCAL1-206ENST00000427645 RPS6KA4O75676 772 aa10.53□□□□□ -0.72
SMARCAL1-206ENST00000427645 SNRPA1P09661 255 aaKnown RBP10.53□□□□□ -0.72
SMARCAL1-206ENST00000427645 TGFB2P61812 414 aa10.53□□□□□ -0.72
SMARCAL1-206ENST00000427645 ZKSCAN2Q63HK3 967 aa10.53□□□□□ -0.72
SMARCAL1-206ENST00000427645 TEX13AQ9BXU3 409 aaPredicted RBP10.53□□□□□ -0.72
SMARCAL1-206ENST00000427645 PARP3Q9Y6F1 533 aa10.53□□□□□ -0.72
SMARCAL1-206ENST00000427645 CACNA1FO60840 1977 aa10.53□□□□□ -0.72
SMARCAL1-206ENST00000427645 HEG1Q9ULI3 1381 aa10.52□□□□□ -0.72
SMARCAL1-206ENST00000427645 KCNQ3O43525 872 aa10.52□□□□□ -0.73
SMARCAL1-206ENST00000427645 KCNA3P22001 575 aa10.52□□□□□ -0.73
SMARCAL1-206ENST00000427645 CRKLP46109 303 aaKnown RBP10.52□□□□□ -0.73
SMARCAL1-206ENST00000427645 SLC39A6Q13433 755 aa10.52□□□□□ -0.73
SMARCAL1-206ENST00000427645 RC3H1Q5TC82 1133 aaKnown RBP10.52□□□□□ -0.73
SMARCAL1-206ENST00000427645 MRPL50Q8N5N7 158 aaKnown RBP10.52□□□□□ -0.73
SMARCAL1-206ENST00000427645 FRAT1Q92837 279 aaPredicted RBP10.52□□□□□ -0.73
SMARCAL1-206ENST00000427645 NMRK2Q9NPI5 230 aa10.52□□□□□ -0.73
SMARCAL1-206ENST00000427645 CCDC87Q9NVE4 849 aa10.52□□□□□ -0.73
SMARCAL1-206ENST00000427645 KRT24Q2M2I5 525 aa10.51□□□□□ -0.73
SMARCAL1-206ENST00000427645 HDGFL1Q5TGJ6 251 aa10.51□□□□□ -0.73
SMARCAL1-206ENST00000427645 VSIG10Q8N0Z9 540 aa10.51□□□□□ -0.73
SMARCAL1-206ENST00000427645 DBF4Q9UBU7 674 aaPredicted RBP10.51□□□□□ -0.73
SMARCAL1-206ENST00000427645 NOB1Q9ULX3 412 aaKnown RBP10.51□□□□□ -0.73
SMARCAL1-206ENST00000427645 CNTNAP4Q9C0A0 1308 aa10.51□□□□□ -0.73
SMARCAL1-206ENST00000427645 C10orf71Q711Q0 1435 aa10.5□□□□□ -0.73
SMARCAL1-206ENST00000427645 N4BP2Q86UW6 1770 aaPredicted RBP10.5□□□□□ -0.73
SMARCAL1-206ENST00000427645 PLIN1O60240 522 aa10.5□□□□□ -0.73
SMARCAL1-206ENST00000427645 CHRNA5P30532 468 aa10.5□□□□□ -0.73
SMARCAL1-206ENST00000427645 HTRA3P83110 453 aa10.5□□□□□ -0.73
SMARCAL1-206ENST00000427645 DDR1Q08345 913 aa10.5□□□□□ -0.73
SMARCAL1-206ENST00000427645 AAMPQ13685 434 aa10.5□□□□□ -0.73
SMARCAL1-206ENST00000427645 C9orf131Q5VYM1 1079 aa10.5□□□□□ -0.73
SMARCAL1-206ENST00000427645 ATF7IPQ6VMQ6 1270 aa10.5□□□□□ -0.73
SMARCAL1-206ENST00000427645 ZNF496Q96IT1 587 aaPredicted RBP10.5□□□□□ -0.73
SMARCAL1-206ENST00000427645 BCL2L13Q9BXK5 485 aa10.5□□□□□ -0.73
SMARCAL1-206ENST00000427645 API5Q9BZZ5 524 aaKnown RBP10.5□□□□□ -0.73
SMARCAL1-206ENST00000427645 PTPRCP08575 1304 aa10.5□□□□□ -0.73
SMARCAL1-206ENST00000427645 EIF2S2P20042 333 aaKnown RBP10.49□□□□□ -0.73
SMARCAL1-206ENST00000427645 INTS5Q6P9B9 1019 aaKnown RBP10.49□□□□□ -0.73
SMARCAL1-206ENST00000427645 CHMP4BQ9H444 224 aaKnown RBP10.49□□□□□ -0.73
SMARCAL1-206ENST00000427645 KIAA1551Q9HCM1 1747 aa10.49□□□□□ -0.73
SMARCAL1-206ENST00000427645 TOMM70O94826 608 aa10.48□□□□□ -0.73
SMARCAL1-206ENST00000427645 DNAJC10Q8IXB1 793 aa10.48□□□□□ -0.73
SMARCAL1-206ENST00000427645 FTSJ3Q8IY81 847 aaKnown RBP10.48□□□□□ -0.73
SMARCAL1-206ENST00000427645 DZIP1LQ8IYY4 767 aaKnown RBP10.48□□□□□ -0.73
SMARCAL1-206ENST00000427645 HYPKQ9NX55 129 aa10.48□□□□□ -0.73
SMARCAL1-206ENST00000427645 PIM2Q9P1W9 311 aa10.48□□□□□ -0.73
SMARCAL1-206ENST00000427645 ERBB4Q15303 1308 aa10.48□□□□□ -0.73
SMARCAL1-206ENST00000427645 STARD3NLO95772 234 aa10.47□□□□□ -0.73
SMARCAL1-206ENST00000427645 DALRD3Q5D0E6 543 aaKnown RBP10.47□□□□□ -0.73
SMARCAL1-206ENST00000427645 USPL1Q5W0Q7 1092 aa10.47□□□□□ -0.73
SMARCAL1-206ENST00000427645 DDX21Q9NR30 783 aaKnown RBP eCLIP10.47□□□□□ -0.73
SMARCAL1-206ENST00000427645 USP42Q9H9J4 1324 aaKnown RBP10.47□□□□□ -0.73
SMARCAL1-206ENST00000427645 C4AP0C0L4 1744 aa10.47□□□□□ -0.73
SMARCAL1-206ENST00000427645 UBR2Q8IWV8 1755 aa10.47□□□□□ -0.73
SMARCAL1-206ENST00000427645 POLRMTO00411 1230 aaKnown RBP10.46□□□□□ -0.73
SMARCAL1-206ENST00000427645 TCERG1O14776 1098 aaKnown RBP10.46□□□□□ -0.73
SMARCAL1-206ENST00000427645 TRIM27P14373 513 aa10.46□□□□□ -0.73
SMARCAL1-206ENST00000427645 IRX6P78412 446 aaPredicted RBP10.46□□□□□ -0.73
SMARCAL1-206ENST00000427645 DNAJC5GQ8N7S2 189 aa10.46□□□□□ -0.73
SMARCAL1-206ENST00000427645 NECTIN2Q92692 538 aa10.46□□□□□ -0.73
SMARCAL1-206ENST00000427645 RRAGCQ9HB90 399 aa10.46□□□□□ -0.73
SMARCAL1-206ENST00000427645 RNF181Q9P0P0 153 aa10.46□□□□□ -0.73
SMARCAL1-206ENST00000427645 USP16Q9Y5T5 823 aa10.46□□□□□ -0.73
SMARCAL1-206ENST00000427645 COL5A3P25940 1745 aaPredicted RBP10.46□□□□□ -0.74
SMARCAL1-206ENST00000427645 MYH14Q7Z406 1995 aaKnown RBP10.45□□□□□ -0.74
SMARCAL1-206ENST00000427645 SPDYE4A6NLX3 237 aa10.45□□□□□ -0.74
SMARCAL1-206ENST00000427645 DDX58O95786 925 aaKnown RBP10.45□□□□□ -0.74
SMARCAL1-206ENST00000427645 TM4SF1P30408 202 aa10.45□□□□□ -0.74
SMARCAL1-206ENST00000427645 APLP1P51693 650 aa10.45□□□□□ -0.74
SMARCAL1-206ENST00000427645 RASSF7Q02833 373 aa10.45□□□□□ -0.74
SMARCAL1-206ENST00000427645 FLIIQ13045 1269 aa10.45□□□□□ -0.74
SMARCAL1-206ENST00000427645 PPP4R2Q9NY27 417 aa10.45□□□□□ -0.74
SMARCAL1-206ENST00000427645 CHPF2Q9P2E5 772 aa10.45□□□□□ -0.74
SMARCAL1-206ENST00000427645 KIF13BQ9NQT8 1826 aa10.44□□□□□ -0.74
SMARCAL1-206ENST00000427645 KCPQ6ZWJ8 1503 aa10.44□□□□□ -0.74
SMARCAL1-206ENST00000427645 PRAMEF22A3QJZ6 481 aa10.44□□□□□ -0.74
SMARCAL1-206ENST00000427645 ABCB7O75027 752 aa10.44□□□□□ -0.74
SMARCAL1-206ENST00000427645 ZPR1O75312 459 aa10.44□□□□□ -0.74
SMARCAL1-206ENST00000427645 CYP19A1P11511 503 aaPredicted RBP10.44□□□□□ -0.74
SMARCAL1-206ENST00000427645 FKBP5Q13451 457 aaPredicted RBP10.44□□□□□ -0.74
SMARCAL1-206ENST00000427645 MVPQ14764 893 aaKnown RBP10.44□□□□□ -0.74
SMARCAL1-206ENST00000427645 NFIXQ14938 502 aa10.44□□□□□ -0.74
SMARCAL1-206ENST00000427645 C20orf194Q5TEA3 1177 aa10.44□□□□□ -0.74
SMARCAL1-206ENST00000427645 CLUAP1Q96AJ1 413 aa10.44□□□□□ -0.74
SMARCAL1-206ENST00000427645 CRBNQ96SW2 442 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms