RNA–Protein interactions for RNA: ENST00000427076.5

POLR2J4-202, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 6,466 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-202ENST00000427076 SRGAP3O43295 1099 aa13.07□□□□□ -0.32
POLR2J4-202ENST00000427076 BANK1Q8NDB2 785 aa13.07□□□□□ -0.32
POLR2J4-202ENST00000427076 SMARCA5O60264 1052 aaPredicted RBP13.07□□□□□ -0.32
POLR2J4-202ENST00000427076 GNG11P61952 73 aa13.07□□□□□ -0.32
POLR2J4-202ENST00000427076 ZNF354CQ86Y25 554 aa13.07□□□□□ -0.32
POLR2J4-202ENST00000427076 PEX19P40855 299 aa13.07□□□□□ -0.32
POLR2J4-202ENST00000427076 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.07□□□□□ -0.32
POLR2J4-202ENST00000427076 AIDAQ96BJ3 306 aa13.07□□□□□ -0.32
POLR2J4-202ENST00000427076 OTUD6BQ8N6M0 293 aa13.07□□□□□ -0.32
POLR2J4-202ENST00000427076 ABCF2Q9UG63 623 aa13.07□□□□□ -0.32
POLR2J4-202ENST00000427076 CAPZA3Q96KX2 299 aa13.07□□□□□ -0.32
POLR2J4-202ENST00000427076 TNIP1Q15025 636 aa13.06□□□□□ -0.32
POLR2J4-202ENST00000427076 FEZ2Q9UHY8 353 aaPredicted RBP13.06□□□□□ -0.32
POLR2J4-202ENST00000427076 TXNDC2Q86VQ3 553 aa13.06□□□□□ -0.32
POLR2J4-202ENST00000427076 SSX2IPQ9Y2D8 614 aa13.06□□□□□ -0.32
POLR2J4-202ENST00000427076 DYNC1I1O14576 645 aa13.06□□□□□ -0.32
POLR2J4-202ENST00000427076 CCDC40Q4G0X9 1142 aa13.06□□□□□ -0.32
POLR2J4-202ENST00000427076 CCDC155Q8N6L0 562 aa13.06□□□□□ -0.32
POLR2J4-202ENST00000427076 IQCGQ9H095 443 aaKnown RBP13.06□□□□□ -0.32
POLR2J4-202ENST00000427076 RASSF4Q9H2L5 321 aa13.06□□□□□ -0.32
POLR2J4-202ENST00000427076 CTNNA3Q9UI47 895 aa13.06□□□□□ -0.32
POLR2J4-202ENST00000427076 GJC1P36383 396 aa13.05□□□□□ -0.32
POLR2J4-202ENST00000427076 CCDC144CPQ8IYA2 1237 aa13.05□□□□□ -0.32
POLR2J4-202ENST00000427076 SRCIN1Q9C0H9 1055 aa13.05□□□□□ -0.32
POLR2J4-202ENST00000427076 KIAA0753Q2KHM9 967 aa13.05□□□□□ -0.32
POLR2J4-202ENST00000427076 ANAPC4Q9UJX5 808 aa13.05□□□□□ -0.32
POLR2J4-202ENST00000427076 PDE6BP35913 854 aa13.05□□□□□ -0.32
POLR2J4-202ENST00000427076 CCT2P78371 535 aaKnown RBP13.05□□□□□ -0.32
POLR2J4-202ENST00000427076 ZBTB16Q05516 673 aa13.05□□□□□ -0.32
POLR2J4-202ENST00000427076 FSIP1Q8NA03 581 aa13.05□□□□□ -0.32
POLR2J4-202ENST00000427076 USH1CQ9Y6N9 552 aa13.05□□□□□ -0.32
POLR2J4-202ENST00000427076 KIF3CO14782 793 aa13.05□□□□□ -0.32
POLR2J4-202ENST00000427076 CA8P35219 290 aa13.04□□□□□ -0.32
POLR2J4-202ENST00000427076 CCDC121Q6ZUS5 278 aa13.04□□□□□ -0.32
POLR2J4-202ENST00000427076 CCDC94Q9BW85 323 aaPredicted RBP13.04□□□□□ -0.32
POLR2J4-202ENST00000427076 TFIP11Q9UBB9 837 aaKnown RBP13.04□□□□□ -0.32
POLR2J4-202ENST00000427076 TPX2Q9ULW0 747 aaKnown RBP13.04□□□□□ -0.32
POLR2J4-202ENST00000427076 BTBD11A6QL63 1104 aa13.04□□□□□ -0.32
POLR2J4-202ENST00000427076 U2AF2P26368 475 aaKnown RBP eCLIP13.04□□□□□ -0.32
POLR2J4-202ENST00000427076 CCDC114Q96M63 670 aa13.04□□□□□ -0.32
POLR2J4-202ENST00000427076 DNAI2Q9GZS0 605 aa13.04□□□□□ -0.32
POLR2J4-202ENST00000427076 NSRP1Q9H0G5 558 aaKnown RBP13.04□□□□□ -0.32
POLR2J4-202ENST00000427076 RBM28Q9NW13 759 aaKnown RBP13.04□□□□□ -0.32
POLR2J4-202ENST00000427076 ZNF219Q9P2Y4 722 aaPredicted RBP13.04□□□□□ -0.32
POLR2J4-202ENST00000427076 TMEM110-MUSTN1A8MSY1 372 aa13.04□□□□□ -0.32
POLR2J4-202ENST00000427076 CCT4P50991 539 aaKnown RBP13.04□□□□□ -0.32
POLR2J4-202ENST00000427076 KSR1Q8IVT5 923 aa13.04□□□□□ -0.32
POLR2J4-202ENST00000427076 C8orf76Q96K31 380 aa13.04□□□□□ -0.32
POLR2J4-202ENST00000427076 TMOD2Q9NZR1 351 aa13.04□□□□□ -0.32
POLR2J4-202ENST00000427076 FAM170AA1A519 330 aa13.04□□□□□ -0.32
POLR2J4-202ENST00000427076 CWC25Q9NXE8 425 aaPredicted RBP13.04□□□□□ -0.32
POLR2J4-202ENST00000427076 NDC80O14777 642 aa13.04□□□□□ -0.32
POLR2J4-202ENST00000427076 IGHMBP2P38935 993 aaKnown RBP13.04□□□□□ -0.32
POLR2J4-202ENST00000427076 SLC4A8Q2Y0W8 1093 aa13.04□□□□□ -0.32
POLR2J4-202ENST00000427076 DDX46Q7L014 1031 aaKnown RBP13.04□□□□□ -0.32
POLR2J4-202ENST00000427076 ARHGAP5Q13017 1502 aa13.04□□□□□ -0.32
POLR2J4-202ENST00000427076 RAB11FIP4Q86YS3 637 aa13.03□□□□□ -0.32
POLR2J4-202ENST00000427076 CRACR2BQ8N4Y2 399 aaPredicted RBP13.03□□□□□ -0.32
POLR2J4-202ENST00000427076 SMC6Q96SB8 1091 aa13.03□□□□□ -0.32
POLR2J4-202ENST00000427076 BUB1BO60566 1050 aaPredicted RBP13.03□□□□□ -0.32
POLR2J4-202ENST00000427076 POLR3DP05423 398 aaPredicted RBP13.03□□□□□ -0.32
POLR2J4-202ENST00000427076 MAP7D1Q3KQU3 841 aa13.03□□□□□ -0.32
POLR2J4-202ENST00000427076 RSRC1Q96IZ7 334 aaKnown RBP13.03□□□□□ -0.32
POLR2J4-202ENST00000427076 PRAM1Q96QH2 718 aa13.03□□□□□ -0.32
POLR2J4-202ENST00000427076 CIZ1Q9ULV3 898 aaPredicted RBP13.03□□□□□ -0.32
POLR2J4-202ENST00000427076 CKAP4Q07065 602 aaKnown RBP13.03□□□□□ -0.32
POLR2J4-202ENST00000427076 KRT32Q14532 448 aa13.03□□□□□ -0.32
POLR2J4-202ENST00000427076 ZNF530Q6P9A1 599 aaPredicted RBP13.03□□□□□ -0.32
POLR2J4-202ENST00000427076 RAD54L2Q9Y4B4 1467 aa13.03□□□□□ -0.32
POLR2J4-202ENST00000427076 FGFR1OPO95684 399 aaKnown RBP13.03□□□□□ -0.32
POLR2J4-202ENST00000427076 RHOXF2BP0C7M4 288 aa13.03□□□□□ -0.32
POLR2J4-202ENST00000427076 RHOXF2Q9BQY4 288 aa13.03□□□□□ -0.32
POLR2J4-202ENST00000427076 EXOC6BQ9Y2D4 811 aa13.02□□□□□ -0.32
POLR2J4-202ENST00000427076 KRT13P13646 458 aa13.02□□□□□ -0.32
POLR2J4-202ENST00000427076 IDEP14735 1019 aa13.02□□□□□ -0.32
POLR2J4-202ENST00000427076 DDX27Q96GQ7 796 aaKnown RBP13.02□□□□□ -0.32
POLR2J4-202ENST00000427076 GBP7Q8N8V2 638 aaPredicted RBP13.02□□□□□ -0.33
POLR2J4-202ENST00000427076 ACTN2P35609 894 aa13.02□□□□□ -0.33
POLR2J4-202ENST00000427076 TNPO1Q92973 898 aaKnown RBP13.02□□□□□ -0.33
POLR2J4-202ENST00000427076 MKNK2Q9HBH9 465 aa13.02□□□□□ -0.33
POLR2J4-202ENST00000427076 CCDC7Q96M83 1385 aa13.02□□□□□ -0.33
POLR2J4-202ENST00000427076 KIF5BP33176 963 aa13.02□□□□□ -0.33
POLR2J4-202ENST00000427076 MVPQ14764 893 aaKnown RBP13.02□□□□□ -0.33
POLR2J4-202ENST00000427076 SULT6B1Q6IMI4 303 aa13.02□□□□□ -0.33
POLR2J4-202ENST00000427076 CCDC170Q8IYT3 715 aa13.02□□□□□ -0.33
POLR2J4-202ENST00000427076 VIMP08670 466 aaKnown RBP13.01□□□□□ -0.33
POLR2J4-202ENST00000427076 NLRP5P59047 1200 aa13.01□□□□□ -0.33
POLR2J4-202ENST00000427076 WIZO95785 1651 aa13.01□□□□□ -0.33
POLR2J4-202ENST00000427076 GOLGA6L9A6NEM1 432 aa13.01□□□□□ -0.33
POLR2J4-202ENST00000427076 RANBP6O60518 1105 aaKnown RBP13.01□□□□□ -0.33
POLR2J4-202ENST00000427076 ERCC5P28715 1186 aaPredicted RBP13.01□□□□□ -0.33
POLR2J4-202ENST00000427076 TACO1Q9BSH4 297 aaKnown RBP13.01□□□□□ -0.33
POLR2J4-202ENST00000427076 PTGS1P23219 599 aa13.01□□□□□ -0.33
POLR2J4-202ENST00000427076 SREK1Q8WXA9 508 aaKnown RBP13.01□□□□□ -0.33
POLR2J4-202ENST00000427076 SYCP3Q8IZU3 236 aa13.01□□□□□ -0.33
POLR2J4-202ENST00000427076 CDK19Q9BWU1 502 aa13.01□□□□□ -0.33
POLR2J4-202ENST00000427076 IVLP07476 585 aa13.01□□□□□ -0.33
POLR2J4-202ENST00000427076 LRCH2Q5VUJ6 765 aa13.01□□□□□ -0.33
POLR2J4-202ENST00000427076 ANKS4BQ8N8V4 417 aa13.01□□□□□ -0.33
POLR2J4-202ENST00000427076 ANKIB1Q9P2G1 1089 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms