RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 ZNF853P0CG23 659 aa23.99■■□□□ 1.43
SMARCAL1-205ENST00000425815 PROSER3Q2NL68 480 aa23.99■■□□□ 1.43
SMARCAL1-205ENST00000425815 ZNF652Q9Y2D9 606 aa23.99■■□□□ 1.43
SMARCAL1-205ENST00000425815 ADCY9O60503 1353 aa23.99■■□□□ 1.43
SMARCAL1-205ENST00000425815 CFAP44Q96MT7 982 aa23.98■■□□□ 1.43
SMARCAL1-205ENST00000425815 NIP7Q9Y221 180 aaKnown RBP eCLIP23.98■■□□□ 1.43
SMARCAL1-205ENST00000425815 ERBB4Q15303 1308 aa23.98■■□□□ 1.43
SMARCAL1-205ENST00000425815 H0YIN7 160 aa23.97■■□□□ 1.43
SMARCAL1-205ENST00000425815 MAP3K15Q6ZN16 1313 aa23.97■■□□□ 1.43
SMARCAL1-205ENST00000425815 CNBD1Q8NA66 436 aa23.97■■□□□ 1.43
SMARCAL1-205ENST00000425815 BCORQ6W2J9 1755 aa23.96■■□□□ 1.43
SMARCAL1-205ENST00000425815 ANXA1P04083 346 aa23.96■■□□□ 1.43
SMARCAL1-205ENST00000425815 PDE6BP35913 854 aa23.96■■□□□ 1.43
SMARCAL1-205ENST00000425815 BRCA1P38398 1863 aaKnown RBP23.96■■□□□ 1.43
SMARCAL1-205ENST00000425815 LAMB4A4D0S4 1761 aa23.96■■□□□ 1.43
SMARCAL1-205ENST00000425815 NBPF5PQ86XG9 351 aaPredicted RBP23.95■■□□□ 1.42
SMARCAL1-205ENST00000425815 TTLL6Q8N841 843 aa23.95■■□□□ 1.42
SMARCAL1-205ENST00000425815 NECTIN2Q92692 538 aa23.95■■□□□ 1.42
SMARCAL1-205ENST00000425815 MBIPQ9NS73 344 aa23.95■■□□□ 1.42
SMARCAL1-205ENST00000425815 ATP10DQ9P241 1426 aa23.94■■□□□ 1.42
SMARCAL1-205ENST00000425815 ZBTB3Q9H5J0 574 aa23.94■■□□□ 1.42
SMARCAL1-205ENST00000425815 MRS2Q9HD23 443 aa23.94■■□□□ 1.42
SMARCAL1-205ENST00000425815 SENP3-EIF4A1A0A087X0R7 540 aa23.93■■□□□ 1.42
SMARCAL1-205ENST00000425815 PDZRN3Q9UPQ7 1066 aa23.93■■□□□ 1.42
SMARCAL1-205ENST00000425815 FAM177BA6PVY3 158 aa23.92■■□□□ 1.42
SMARCAL1-205ENST00000425815 ST5P78524 1137 aa23.92■■□□□ 1.42
SMARCAL1-205ENST00000425815 TPTE2Q6XPS3 522 aa23.92■■□□□ 1.42
SMARCAL1-205ENST00000425815 KIF6Q6ZMV9 814 aa23.92■■□□□ 1.42
SMARCAL1-205ENST00000425815 ZNF622Q969S3 477 aaKnown RBP eCLIP23.92■■□□□ 1.42
SMARCAL1-205ENST00000425815 KLRG2A4D1S0 409 aaPredicted RBP23.91■■□□□ 1.42
SMARCAL1-205ENST00000425815 SRGNP10124 158 aa23.91■■□□□ 1.42
SMARCAL1-205ENST00000425815 ZNF34Q8IZ26 560 aa23.91■■□□□ 1.42
SMARCAL1-205ENST00000425815 IFT57Q9NWB7 429 aa23.91■■□□□ 1.42
SMARCAL1-205ENST00000425815 NPHP1O15259 732 aa23.9■■□□□ 1.42
SMARCAL1-205ENST00000425815 GIGYF2Q6Y7W6 1299 aaKnown RBP23.9■■□□□ 1.42
SMARCAL1-205ENST00000425815 COPS6Q7L5N1 327 aa23.9■■□□□ 1.42
SMARCAL1-205ENST00000425815 DDX21Q9NR30 783 aaKnown RBP eCLIP23.9■■□□□ 1.42
SMARCAL1-205ENST00000425815 UBN2Q6ZU65 1347 aa23.89■■□□□ 1.42
SMARCAL1-205ENST00000425815 HOXB7P09629 217 aa23.89■■□□□ 1.41
SMARCAL1-205ENST00000425815 PRELPP51888 382 aa23.89■■□□□ 1.41
SMARCAL1-205ENST00000425815 SUSD4Q5VX71 490 aa23.89■■□□□ 1.41
SMARCAL1-205ENST00000425815 C9orf131Q5VYM1 1079 aa23.89■■□□□ 1.41
SMARCAL1-205ENST00000425815 DUSP27Q5VZP5 1158 aa23.89■■□□□ 1.41
SMARCAL1-205ENST00000425815 ANKRD31Q8N7Z5 1873 aa23.89■■□□□ 1.41
SMARCAL1-205ENST00000425815 GPTP24298 496 aa23.88■■□□□ 1.41
SMARCAL1-205ENST00000425815 STYK1Q6J9G0 422 aa23.88■■□□□ 1.41
SMARCAL1-205ENST00000425815 XAGE3Q8WTP9 111 aa23.88■■□□□ 1.41
SMARCAL1-205ENST00000425815 CHPF2Q9P2E5 772 aa23.88■■□□□ 1.41
SMARCAL1-205ENST00000425815 GNAI1P63096 354 aa23.87■■□□□ 1.41
SMARCAL1-205ENST00000425815 NUTM1Q86Y26 1132 aa23.87■■□□□ 1.41
SMARCAL1-205ENST00000425815 ZNF526Q8TF50 670 aaPredicted RBP23.87■■□□□ 1.41
SMARCAL1-205ENST00000425815 MASTLQ96GX5 879 aa23.87■■□□□ 1.41
SMARCAL1-205ENST00000425815 CALD1Q05682 793 aaKnown RBP23.86■■□□□ 1.41
SMARCAL1-205ENST00000425815 AIMP1Q12904 312 aaKnown RBP23.86■■□□□ 1.41
SMARCAL1-205ENST00000425815 CCDC27Q2M243 656 aa23.86■■□□□ 1.41
SMARCAL1-205ENST00000425815 HDGFL1Q5TGJ6 251 aa23.86■■□□□ 1.41
SMARCAL1-205ENST00000425815 ARFGEF1Q9Y6D6 1849 aa23.86■■□□□ 1.41
SMARCAL1-205ENST00000425815 C21orf2O43822 256 aa23.85■■□□□ 1.41
SMARCAL1-205ENST00000425815 RASSF7Q02833 373 aa23.85■■□□□ 1.41
SMARCAL1-205ENST00000425815 ERFEQ4G0M1 354 aa23.85■■□□□ 1.41
SMARCAL1-205ENST00000425815 WWC1Q8IX03 1113 aa23.85■■□□□ 1.41
SMARCAL1-205ENST00000425815 NFKBIEO00221 500 aa23.84■■□□□ 1.41
SMARCAL1-205ENST00000425815 C8orf58Q8NAV2 365 aa23.84■■□□□ 1.41
SMARCAL1-205ENST00000425815 C7orf43Q8WVR3 580 aa23.84■■□□□ 1.41
SMARCAL1-205ENST00000425815 CNKSR1Q969H4 720 aa23.84■■□□□ 1.41
SMARCAL1-205ENST00000425815 GPBP1L1Q9HC44 474 aaPredicted RBP23.84■■□□□ 1.41
SMARCAL1-205ENST00000425815 DLEC1Q9Y238 1755 aa23.83■■□□□ 1.41
SMARCAL1-205ENST00000425815 ABCC12Q96J65 1359 aa23.83■■□□□ 1.41
SMARCAL1-205ENST00000425815 ELL2O00472 640 aaPredicted RBP23.83■■□□□ 1.41
SMARCAL1-205ENST00000425815 NTSR2O95665 410 aa23.83■■□□□ 1.41
SMARCAL1-205ENST00000425815 NCBP3Q53F19 620 aaKnown RBP23.83■■□□□ 1.41
SMARCAL1-205ENST00000425815 NYXQ9GZU5 481 aa23.83■■□□□ 1.41
SMARCAL1-205ENST00000425815 ZNF219Q9P2Y4 722 aaPredicted RBP23.83■■□□□ 1.41
SMARCAL1-205ENST00000425815 NPR1P16066 1061 aa23.82■■□□□ 1.4
SMARCAL1-205ENST00000425815 GTF2E1P29083 439 aaPredicted RBP23.82■■□□□ 1.4
SMARCAL1-205ENST00000425815 C1QTNF8P60827 252 aa23.82■■□□□ 1.4
SMARCAL1-205ENST00000425815 PRPF40BQ6NWY9 871 aaKnown RBP23.82■■□□□ 1.4
SMARCAL1-205ENST00000425815 RNF181Q9P0P0 153 aa23.82■■□□□ 1.4
SMARCAL1-205ENST00000425815 DBF4Q9UBU7 674 aaPredicted RBP23.82■■□□□ 1.4
SMARCAL1-205ENST00000425815 COL11A2P13942 1736 aaPredicted RBP23.81■■□□□ 1.4
SMARCAL1-205ENST00000425815 TCIRG1Q13488 830 aa23.8■■□□□ 1.4
SMARCAL1-205ENST00000425815 CRY2Q49AN0 593 aa23.8■■□□□ 1.4
SMARCAL1-205ENST00000425815 PARP10Q53GL7 1025 aa23.8■■□□□ 1.4
SMARCAL1-205ENST00000425815 TSPYL6Q8N831 410 aa23.8■■□□□ 1.4
SMARCAL1-205ENST00000425815 IBTKQ9P2D0 1353 aaPredicted RBP23.79■■□□□ 1.4
SMARCAL1-205ENST00000425815 TSR2Q969E8 191 aaKnown RBP23.79■■□□□ 1.4
SMARCAL1-205ENST00000425815 NUP98P52948 1817 aa23.78■■□□□ 1.4
SMARCAL1-205ENST00000425815 KIF3CO14782 793 aa23.78■■□□□ 1.4
SMARCAL1-205ENST00000425815 LMNB1P20700 586 aa23.78■■□□□ 1.4
SMARCAL1-205ENST00000425815 C3orf67Q6ZVT6 689 aa23.78■■□□□ 1.4
SMARCAL1-205ENST00000425815 PPP1R42Q7Z4L9 355 aa23.78■■□□□ 1.4
SMARCAL1-205ENST00000425815 NLRP10Q86W26 655 aa23.78■■□□□ 1.4
SMARCAL1-205ENST00000425815 HYPKQ9NX55 129 aa23.78■■□□□ 1.4
SMARCAL1-205ENST00000425815 SLC10A5Q5PT55 438 aa23.77■■□□□ 1.4
SMARCAL1-205ENST00000425815 ANKRD13DQ6ZTN6 518 aa23.77■■□□□ 1.4
SMARCAL1-205ENST00000425815 PLBD2Q8NHP8 589 aa23.77■■□□□ 1.4
SMARCAL1-205ENST00000425815 UTP14AQ9BVJ6 771 aaKnown RBP23.77■■□□□ 1.4
SMARCAL1-205ENST00000425815 HSP90AB3PQ58FF7 597 aa23.76■■□□□ 1.39
SMARCAL1-205ENST00000425815 OLFM4Q6UX06 510 aa23.76■■□□□ 1.39
SMARCAL1-205ENST00000425815 FAM9BQ8IZU0 186 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms