RNA–Protein interactions for RNA: ENST00000424968.5

LINC00240-202, long intergenic non-protein coding RNA 240, humanhuman

TSL 2

Gene LINC00240, Length 507 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-202ENST00000424968 IGHA2P01877 340 aa7.61□□□□□ -1.19
LINC00240-202ENST00000424968 ST13P50502 369 aaKnown RBP7.61□□□□□ -1.19
LINC00240-202ENST00000424968 MMP16P51512 607 aa7.61□□□□□ -1.19
LINC00240-202ENST00000424968 RACK1P63244 317 aaKnown RBP7.61□□□□□ -1.19
LINC00240-202ENST00000424968 TAF1CQ15572 869 aaPredicted RBP7.61□□□□□ -1.19
LINC00240-202ENST00000424968 PLEKHG4Q58EX7 1191 aa7.61□□□□□ -1.19
LINC00240-202ENST00000424968 SMC5Q8IY18 1101 aa7.61□□□□□ -1.19
LINC00240-202ENST00000424968 THAP11Q96EK4 314 aa7.61□□□□□ -1.19
LINC00240-202ENST00000424968 IRF2BPLQ9H1B7 796 aa7.61□□□□□ -1.19
LINC00240-202ENST00000424968 PCDHB3Q9Y5E6 796 aa7.61□□□□□ -1.19
LINC00240-202ENST00000424968 PCDHGB7Q9Y5F8 929 aa7.61□□□□□ -1.19
LINC00240-202ENST00000424968 USP31Q70CQ4 1352 aa7.6□□□□□ -1.19
LINC00240-202ENST00000424968 PBX2P40425 430 aa7.6□□□□□ -1.19
LINC00240-202ENST00000424968 PAK2Q13177 524 aa7.6□□□□□ -1.19
LINC00240-202ENST00000424968 PWP1Q13610 501 aa7.6□□□□□ -1.19
LINC00240-202ENST00000424968 ERFEQ4G0M1 354 aa7.6□□□□□ -1.19
LINC00240-202ENST00000424968 RASGRP4Q8TDF6 673 aa7.6□□□□□ -1.19
LINC00240-202ENST00000424968 MYO19Q96H55 970 aa7.6□□□□□ -1.19
LINC00240-202ENST00000424968 SRCIN1Q9C0H9 1055 aa7.6□□□□□ -1.19
LINC00240-202ENST00000424968 UNC93B1Q9H1C4 597 aa7.6□□□□□ -1.19
LINC00240-202ENST00000424968 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.6□□□□□ -1.19
LINC00240-202ENST00000424968 ARHGAP33O14559 1287 aa7.59□□□□□ -1.19
LINC00240-202ENST00000424968 SERINC3Q13530 473 aa7.59□□□□□ -1.19
LINC00240-202ENST00000424968 ESCO1Q5FWF5 840 aa7.59□□□□□ -1.19
LINC00240-202ENST00000424968 ANKRD13DQ6ZTN6 518 aa7.59□□□□□ -1.19
LINC00240-202ENST00000424968 SH3RF1Q7Z6J0 888 aa7.59□□□□□ -1.19
LINC00240-202ENST00000424968 ZFRQ96KR1 1074 aaKnown RBP7.59□□□□□ -1.19
LINC00240-202ENST00000424968 NEUROD4Q9HD90 331 aa7.59□□□□□ -1.19
LINC00240-202ENST00000424968 AXIN2Q9Y2T1 843 aa7.59□□□□□ -1.19
LINC00240-202ENST00000424968 CDC45O75419 566 aa7.58□□□□□ -1.2
LINC00240-202ENST00000424968 GDF10P55107 478 aa7.58□□□□□ -1.2
LINC00240-202ENST00000424968 COL9A2Q14055 689 aaPredicted RBP7.58□□□□□ -1.2
LINC00240-202ENST00000424968 PLEKHG6Q3KR16 790 aa7.58□□□□□ -1.2
LINC00240-202ENST00000424968 COX20Q5RI15 118 aa7.58□□□□□ -1.2
LINC00240-202ENST00000424968 TNS4Q8IZW8 715 aa7.58□□□□□ -1.2
LINC00240-202ENST00000424968 SAP130Q9H0E3 1048 aa7.58□□□□□ -1.2
LINC00240-202ENST00000424968 DDX56Q9NY93 547 aaKnown RBP7.58□□□□□ -1.2
LINC00240-202ENST00000424968 FAM8A1Q9UBU6 413 aa7.58□□□□□ -1.2
LINC00240-202ENST00000424968 POLIQ9UNA4 740 aa7.58□□□□□ -1.2
LINC00240-202ENST00000424968 EIF1AYO14602 144 aaKnown RBP7.57□□□□□ -1.2
LINC00240-202ENST00000424968 CPNE3O75131 537 aaKnown RBP7.57□□□□□ -1.2
LINC00240-202ENST00000424968 CTSHP09668 335 aa7.57□□□□□ -1.2
LINC00240-202ENST00000424968 PPP4CP60510 307 aa7.57□□□□□ -1.2
LINC00240-202ENST00000424968 PSMA6P60900 246 aaKnown RBP7.57□□□□□ -1.2
LINC00240-202ENST00000424968 DNM1Q05193 864 aaKnown RBP7.57□□□□□ -1.2
LINC00240-202ENST00000424968 APPBP2Q92624 585 aa7.57□□□□□ -1.2
LINC00240-202ENST00000424968 SPSB2Q99619 263 aa7.57□□□□□ -1.2
LINC00240-202ENST00000424968 C12orf49Q9H741 205 aa7.57□□□□□ -1.2
LINC00240-202ENST00000424968 RNF19AQ9NV58 838 aa7.57□□□□□ -1.2
LINC00240-202ENST00000424968 TMEM229AB2RXF0 380 aa7.56□□□□□ -1.2
LINC00240-202ENST00000424968 TNFRSF10BO14763 440 aa7.56□□□□□ -1.2
LINC00240-202ENST00000424968 INHAP05111 366 aa7.56□□□□□ -1.2
LINC00240-202ENST00000424968 HOMER1Q86YM7 354 aa7.56□□□□□ -1.2
LINC00240-202ENST00000424968 TRMT44Q8IYL2 757 aaKnown RBP7.56□□□□□ -1.2
LINC00240-202ENST00000424968 SLC4A9Q96Q91 983 aa7.56□□□□□ -1.2
LINC00240-202ENST00000424968 C2orf49Q9BVC5 232 aaPredicted RBP7.56□□□□□ -1.2
LINC00240-202ENST00000424968 TSPAN10Q9H1Z9 355 aaPredicted RBP7.56□□□□□ -1.2
LINC00240-202ENST00000424968 SLC52A1Q9NWF4 448 aa7.56□□□□□ -1.2
LINC00240-202ENST00000424968 LSM11P83369 360 aaKnown RBP eCLIP7.55□□□□□ -1.2
LINC00240-202ENST00000424968 CCDC24Q8N4L8 307 aa7.55□□□□□ -1.2
LINC00240-202ENST00000424968 NBPF15Q8N660 670 aa7.55□□□□□ -1.2
LINC00240-202ENST00000424968 RNPC3Q96LT9 517 aaKnown RBP7.55□□□□□ -1.2
LINC00240-202ENST00000424968 SETDB2Q96T68 719 aa7.55□□□□□ -1.2
LINC00240-202ENST00000424968 UBA5Q9GZZ9 404 aa7.55□□□□□ -1.2
LINC00240-202ENST00000424968 PPP4R2Q9NY27 417 aa7.55□□□□□ -1.2
LINC00240-202ENST00000424968 TCEAL9Q9UHQ7 104 aa7.55□□□□□ -1.2
LINC00240-202ENST00000424968 PEX14O75381 377 aa7.54□□□□□ -1.2
LINC00240-202ENST00000424968 MAP4K4O95819 1239 aaPredicted RBP7.54□□□□□ -1.2
LINC00240-202ENST00000424968 PDGFAP04085 211 aa7.54□□□□□ -1.2
LINC00240-202ENST00000424968 RLBP1P12271 317 aa7.54□□□□□ -1.2
LINC00240-202ENST00000424968 PSEN2P49810 448 aa7.54□□□□□ -1.2
LINC00240-202ENST00000424968 C11orf91Q3C1V1 193 aa7.54□□□□□ -1.2
LINC00240-202ENST00000424968 KIAA0825Q8IV33 1275 aa7.54□□□□□ -1.2
LINC00240-202ENST00000424968 MRPL50Q8N5N7 158 aaKnown RBP7.54□□□□□ -1.2
LINC00240-202ENST00000424968 EDEM1Q92611 657 aa7.54□□□□□ -1.2
LINC00240-202ENST00000424968 RELTQ969Z4 430 aa7.54□□□□□ -1.2
LINC00240-202ENST00000424968 STAC3Q96MF2 364 aa7.54□□□□□ -1.2
LINC00240-202ENST00000424968 SPON2Q9BUD6 331 aa7.54□□□□□ -1.2
LINC00240-202ENST00000424968 KRTAP3-3Q9BYR6 98 aa7.54□□□□□ -1.2
LINC00240-202ENST00000424968 KRTAP3-2Q9BYR7 98 aa7.54□□□□□ -1.2
LINC00240-202ENST00000424968 A0A1W2PRU2 124 aa7.53□□□□□ -1.2
LINC00240-202ENST00000424968 IFRD2Q12894 506 aaPredicted RBP7.53□□□□□ -1.2
LINC00240-202ENST00000424968 RAB33AQ14088 237 aa7.53□□□□□ -1.2
LINC00240-202ENST00000424968 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.53□□□□□ -1.2
LINC00240-202ENST00000424968 ANKS3Q6ZW76 656 aa7.53□□□□□ -1.2
LINC00240-202ENST00000424968 ERMP1Q7Z2K6 904 aa7.53□□□□□ -1.2
LINC00240-202ENST00000424968 CCDC146Q8IYE0 955 aa7.53□□□□□ -1.2
LINC00240-202ENST00000424968 CPLX3Q8WVH0 158 aa7.53□□□□□ -1.2
LINC00240-202ENST00000424968 DEPDC7Q96QD5 511 aa7.53□□□□□ -1.2
LINC00240-202ENST00000424968 NOC4LQ9BVI4 516 aaKnown RBP7.53□□□□□ -1.2
LINC00240-202ENST00000424968 SCHIP1Q9P0W5 487 aaPredicted RBP7.53□□□□□ -1.2
LINC00240-202ENST00000424968 V9GY48 417 aaPredicted RBP7.53□□□□□ -1.2
LINC00240-202ENST00000424968 PRC1O43663 620 aa7.52□□□□□ -1.21
LINC00240-202ENST00000424968 PDGFRBP09619 1106 aa7.52□□□□□ -1.21
LINC00240-202ENST00000424968 ZAP70P43403 619 aa7.52□□□□□ -1.21
LINC00240-202ENST00000424968 EPHA4P54764 986 aa7.52□□□□□ -1.21
LINC00240-202ENST00000424968 DHX9Q08211 1270 aaKnown RBP7.52□□□□□ -1.21
LINC00240-202ENST00000424968 TNNI3KQ59H18 835 aa7.52□□□□□ -1.21
LINC00240-202ENST00000424968 CYP2U1Q7Z449 544 aa7.52□□□□□ -1.21
LINC00240-202ENST00000424968 RELL1Q8IUW5 271 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms