RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 DACH1Q9UI36 760 aa9.39□□□□□ -0.91
EPHA4-206ENST00000424339 NUDCQ9Y266 331 aa9.39□□□□□ -0.91
EPHA4-206ENST00000424339 NRAPQ86VF7 1730 aa9.39□□□□□ -0.91
EPHA4-206ENST00000424339 WDR17Q8IZU2 1322 aa9.38□□□□□ -0.91
EPHA4-206ENST00000424339 CCER2I3L3R5 266 aa9.38□□□□□ -0.91
EPHA4-206ENST00000424339 DIAPH1O60610 1272 aaKnown RBP9.38□□□□□ -0.91
EPHA4-206ENST00000424339 EVA1CP58658 441 aa9.38□□□□□ -0.91
EPHA4-206ENST00000424339 INSM1Q01101 510 aaPredicted RBP9.38□□□□□ -0.91
EPHA4-206ENST00000424339 CNGB1Q14028 1251 aaPredicted RBP9.38□□□□□ -0.91
EPHA4-206ENST00000424339 CHRNA2Q15822 529 aa9.38□□□□□ -0.91
EPHA4-206ENST00000424339 UNC5CLQ8IV45 518 aa9.38□□□□□ -0.91
EPHA4-206ENST00000424339 BTG4Q9NY30 223 aa9.38□□□□□ -0.91
EPHA4-206ENST00000424339 CRB1P82279 1406 aa9.38□□□□□ -0.91
EPHA4-206ENST00000424339 RGPD5Q99666 1765 aa9.37□□□□□ -0.91
EPHA4-206ENST00000424339 COL3A1P02461 1466 aaPredicted RBP9.37□□□□□ -0.91
EPHA4-206ENST00000424339 BCL9LQ86UU0 1499 aa9.37□□□□□ -0.91
EPHA4-206ENST00000424339 ZBTB7CA1YPR0 619 aa9.37□□□□□ -0.91
EPHA4-206ENST00000424339 AXIN1O15169 862 aa9.37□□□□□ -0.91
EPHA4-206ENST00000424339 HSP90AB2PQ58FF8 381 aa9.37□□□□□ -0.91
EPHA4-206ENST00000424339 ANKRD24Q8TF21 1146 aa9.37□□□□□ -0.91
EPHA4-206ENST00000424339 PKD2L1Q9P0L9 805 aa9.37□□□□□ -0.91
EPHA4-206ENST00000424339 USP21Q9UK80 565 aa9.37□□□□□ -0.91
EPHA4-206ENST00000424339 THRAP3Q9Y2W1 955 aaKnown RBP9.37□□□□□ -0.91
EPHA4-206ENST00000424339 AFF2P51816 1311 aa9.36□□□□□ -0.91
EPHA4-206ENST00000424339 CFHP08603 1231 aa9.36□□□□□ -0.91
EPHA4-206ENST00000424339 CSB-PGBD3P0DP91 1061 aa9.36□□□□□ -0.91
EPHA4-206ENST00000424339 FBLN1P23142 703 aa9.36□□□□□ -0.91
EPHA4-206ENST00000424339 VPS72Q15906 364 aa9.36□□□□□ -0.91
EPHA4-206ENST00000424339 PLA2G2CQ5R387 149 aa9.36□□□□□ -0.91
EPHA4-206ENST00000424339 CRIPAKQ8N1N5 446 aa9.36□□□□□ -0.91
EPHA4-206ENST00000424339 RBM46Q8TBY0 533 aaKnown RBP9.36□□□□□ -0.91
EPHA4-206ENST00000424339 CDCA7Q9BWT1 371 aaPredicted RBP9.36□□□□□ -0.91
EPHA4-206ENST00000424339 CARD10Q9BWT7 1032 aa9.36□□□□□ -0.91
EPHA4-206ENST00000424339 PNNQ9H307 717 aaKnown RBP9.36□□□□□ -0.91
EPHA4-206ENST00000424339 GMPR2Q9P2T1 348 aaKnown RBP9.36□□□□□ -0.91
EPHA4-206ENST00000424339 TRPC5Q9UL62 973 aaPredicted RBP9.36□□□□□ -0.91
EPHA4-206ENST00000424339 NCAPD2Q15021 1401 aa9.36□□□□□ -0.91
EPHA4-206ENST00000424339 CD2BP2O95400 341 aaKnown RBP9.35□□□□□ -0.91
EPHA4-206ENST00000424339 RGPD1P0DJD0 1748 aa9.35□□□□□ -0.91
EPHA4-206ENST00000424339 IL13P35225 146 aa9.35□□□□□ -0.91
EPHA4-206ENST00000424339 EIF4A2Q14240 407 aaKnown RBP9.35□□□□□ -0.91
EPHA4-206ENST00000424339 TPRNQ4KMQ1 711 aa9.35□□□□□ -0.91
EPHA4-206ENST00000424339 TOM1L2Q6ZVM7 507 aa9.35□□□□□ -0.91
EPHA4-206ENST00000424339 CYP4X1Q8N118 509 aa9.35□□□□□ -0.91
EPHA4-206ENST00000424339 KDRP35968 1356 aa9.35□□□□□ -0.91
EPHA4-206ENST00000424339 IGSF1Q8N6C5 1336 aa9.34□□□□□ -0.91
EPHA4-206ENST00000424339 ATRNO75882 1429 aa9.34□□□□□ -0.91
EPHA4-206ENST00000424339 CENPBP07199 599 aaPredicted RBP9.34□□□□□ -0.91
EPHA4-206ENST00000424339 WDR43Q15061 677 aaKnown RBP eCLIP9.34□□□□□ -0.91
EPHA4-206ENST00000424339 TMEM134Q9H6X4 195 aa9.34□□□□□ -0.91
EPHA4-206ENST00000424339 MRS2Q9HD23 443 aa9.34□□□□□ -0.91
EPHA4-206ENST00000424339 STRN4Q9NRL3 753 aa9.34□□□□□ -0.91
EPHA4-206ENST00000424339 SPATA31A5Q5VU36 1347 aa9.33□□□□□ -0.92
EPHA4-206ENST00000424339 SPATA31A7Q8IWB4 1347 aa9.33□□□□□ -0.92
EPHA4-206ENST00000424339 NEFMP07197 916 aa9.33□□□□□ -0.92
EPHA4-206ENST00000424339 BARGINQ6ZT62 677 aa9.33□□□□□ -0.92
EPHA4-206ENST00000424339 SCUBE3Q8IX30 993 aa9.33□□□□□ -0.92
EPHA4-206ENST00000424339 TCP11L2Q8N4U5 519 aa9.33□□□□□ -0.92
EPHA4-206ENST00000424339 BBXQ8WY36 941 aaPredicted RBP9.33□□□□□ -0.92
EPHA4-206ENST00000424339 NLRP2Q9NX02 1062 aa9.33□□□□□ -0.92
EPHA4-206ENST00000424339 SPATA31A1Q5TZJ5 1347 aa9.32□□□□□ -0.92
EPHA4-206ENST00000424339 PARP4Q9UKK3 1724 aaKnown RBP9.32□□□□□ -0.92
EPHA4-206ENST00000424339 FCHSD2O94868 740 aa9.32□□□□□ -0.92
EPHA4-206ENST00000424339 AVPP01185 164 aa9.32□□□□□ -0.92
EPHA4-206ENST00000424339 NFX1Q12986 1120 aaKnown RBP9.32□□□□□ -0.92
EPHA4-206ENST00000424339 CTC1Q2NKJ3 1217 aa9.32□□□□□ -0.92
EPHA4-206ENST00000424339 LARP1Q6PKG0 1096 aaKnown RBP9.32□□□□□ -0.92
EPHA4-206ENST00000424339 RAPGEF4Q8WZA2 1011 aa9.32□□□□□ -0.92
EPHA4-206ENST00000424339 LTV1Q96GA3 475 aaPredicted RBP9.32□□□□□ -0.92
EPHA4-206ENST00000424339 GJD4Q96KN9 370 aaPredicted RBP9.32□□□□□ -0.92
EPHA4-206ENST00000424339 U2SURPO15042 1029 aaKnown RBP9.31□□□□□ -0.92
EPHA4-206ENST00000424339 WIPF1O43516 503 aa9.31□□□□□ -0.92
EPHA4-206ENST00000424339 U2AF1L5P0DN76 240 aaPredicted RBP9.31□□□□□ -0.92
EPHA4-206ENST00000424339 IL2RBP14784 551 aa9.31□□□□□ -0.92
EPHA4-206ENST00000424339 RBM6P78332 1123 aaKnown RBP9.31□□□□□ -0.92
EPHA4-206ENST00000424339 U2AF1Q01081 240 aaKnown RBP eCLIP9.31□□□□□ -0.92
EPHA4-206ENST00000424339 NBPF6Q5VWK0 638 aa9.31□□□□□ -0.92
EPHA4-206ENST00000424339 NBPF4Q96M43 638 aa9.31□□□□□ -0.92
EPHA4-206ENST00000424339 QTRT2Q9H974 415 aaKnown RBP9.31□□□□□ -0.92
EPHA4-206ENST00000424339 CCDC9Q9Y3X0 531 aaKnown RBP9.31□□□□□ -0.92
EPHA4-206ENST00000424339 WNK3Q9BYP7 1800 aa9.31□□□□□ -0.92
EPHA4-206ENST00000424339 RGPD2P0DJD1 1756 aa9.3□□□□□ -0.92
EPHA4-206ENST00000424339 RCCD1A6NED2 376 aa9.3□□□□□ -0.92
EPHA4-206ENST00000424339 RPIAP49247 311 aa9.3□□□□□ -0.92
EPHA4-206ENST00000424339 AMOTQ4VCS5 1084 aa9.3□□□□□ -0.92
EPHA4-206ENST00000424339 SPRYD3Q8NCJ5 442 aa9.3□□□□□ -0.92
EPHA4-206ENST00000424339 SPSB2Q99619 263 aa9.3□□□□□ -0.92
EPHA4-206ENST00000424339 TOR4AQ9NXH8 423 aa9.3□□□□□ -0.92
EPHA4-206ENST00000424339 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.3□□□□□ -0.92
EPHA4-206ENST00000424339 OVOS2A0A0G2JMS6 1433 aa9.3□□□□□ -0.92
EPHA4-206ENST00000424339 DISP2A7MBM2 1401 aa9.3□□□□□ -0.92
EPHA4-206ENST00000424339 TATP17735 454 aaPredicted RBP9.29□□□□□ -0.92
EPHA4-206ENST00000424339 SULT6B1Q6IMI4 303 aa9.29□□□□□ -0.92
EPHA4-206ENST00000424339 NGEFQ8N5V2 710 aa9.29□□□□□ -0.92
EPHA4-206ENST00000424339 PNISRQ8TF01 805 aaKnown RBP9.29□□□□□ -0.92
EPHA4-206ENST00000424339 GLI3P10071 1580 aa9.29□□□□□ -0.92
EPHA4-206ENST00000424339 RXRBP28702 533 aa9.28□□□□□ -0.92
EPHA4-206ENST00000424339 PAXIP1Q6ZW49 1069 aaPredicted RBP9.28□□□□□ -0.92
EPHA4-206ENST00000424339 RSPH6AQ9H0K4 717 aa9.28□□□□□ -0.92
EPHA4-206ENST00000424339 SPG7Q9UQ90 795 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms