RNA–Protein interactions for RNA: ENST00000423692.5

SRRT-201, Transcript of serrate, RNA effector molecule, humanhuman

TSL 5

Gene SRRT, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-201ENST00000423692 LAMB4A4D0S4 1761 aa19.45■□□□□ 0.7
SRRT-201ENST00000423692 NFKBIEO00221 500 aa19.45■□□□□ 0.7
SRRT-201ENST00000423692 SRGNP10124 158 aa19.45■□□□□ 0.7
SRRT-201ENST00000423692 DDX10Q13206 875 aaKnown RBP19.45■□□□□ 0.7
SRRT-201ENST00000423692 STYK1Q6J9G0 422 aa19.45■□□□□ 0.7
SRRT-201ENST00000423692 ZNF622Q969S3 477 aaKnown RBP eCLIP19.45■□□□□ 0.72e-9■■□□□ 13.1
SRRT-201ENST00000423692 COL11A2P13942 1736 aaPredicted RBP19.45■□□□□ 0.7
SRRT-201ENST00000423692 MYBBP1AQ9BQG0 1328 aaKnown RBP19.44■□□□□ 0.7
SRRT-201ENST00000423692 KLRG2A4D1S0 409 aaPredicted RBP19.43■□□□□ 0.7
SRRT-201ENST00000423692 NBPF5PQ86XG9 351 aaPredicted RBP19.43■□□□□ 0.7
SRRT-201ENST00000423692 CNKSR1Q969H4 720 aa19.43■□□□□ 0.7
SRRT-201ENST00000423692 C21orf2O43822 256 aa19.42■□□□□ 0.7
SRRT-201ENST00000423692 HLFQ16534 295 aa19.42■□□□□ 0.7
SRRT-201ENST00000423692 TPTE2Q6XPS3 522 aa19.42■□□□□ 0.7
SRRT-201ENST00000423692 RBM46Q8TBY0 533 aaKnown RBP19.42■□□□□ 0.7
SRRT-201ENST00000423692 MASTLQ96GX5 879 aa19.42■□□□□ 0.7
SRRT-201ENST00000423692 BABAM1Q9NWV8 329 aa19.42■□□□□ 0.7
SRRT-201ENST00000423692 NIP7Q9Y221 180 aaKnown RBP eCLIP19.42■□□□□ 0.7
SRRT-201ENST00000423692 ERVV-1B6SEH8 477 aa19.41■□□□□ 0.7
SRRT-201ENST00000423692 NPHP1O15259 732 aa19.41■□□□□ 0.7
SRRT-201ENST00000423692 RIPK4P57078 832 aa19.41■□□□□ 0.7
SRRT-201ENST00000423692 LTBP3Q9NS15 1303 aa19.41■□□□□ 0.7
SRRT-201ENST00000423692 TMPOP42166 694 aaKnown RBP19.4■□□□□ 0.7
SRRT-201ENST00000423692 ERBB4Q15303 1308 aa19.4■□□□□ 0.7
SRRT-201ENST00000423692 GLTPD2A6NH11 291 aa19.39■□□□□ 0.69
SRRT-201ENST00000423692 PRPF40BQ6NWY9 871 aaKnown RBP19.39■□□□□ 0.69
SRRT-201ENST00000423692 C7orf43Q8WVR3 580 aa19.39■□□□□ 0.69
SRRT-201ENST00000423692 RRAGCQ9HB90 399 aa19.39■□□□□ 0.69
SRRT-201ENST00000423692 MAP3K15Q6ZN16 1313 aa19.39■□□□□ 0.69
SRRT-201ENST00000423692 NPR1P16066 1061 aa19.38■□□□□ 0.69
SRRT-201ENST00000423692 LMOD3Q0VAK6 560 aa19.38■□□□□ 0.69
SRRT-201ENST00000423692 SOGA3Q5TF21 947 aa19.38■□□□□ 0.69
SRRT-201ENST00000423692 TNRC6CQ9HCJ0 1690 aaKnown RBP19.38■□□□□ 0.69
SRRT-201ENST00000423692 TSPYL4Q9UJ04 414 aa19.38■□□□□ 0.69
SRRT-201ENST00000423692 RRP7AQ9Y3A4 280 aaKnown RBP19.38■□□□□ 0.69
SRRT-201ENST00000423692 FER1L6Q2WGJ9 1857 aa19.37■□□□□ 0.69
SRRT-201ENST00000423692 APLP1P51693 650 aa19.37■□□□□ 0.69
SRRT-201ENST00000423692 FSTL1Q12841 308 aa19.37■□□□□ 0.69
SRRT-201ENST00000423692 TTLL7Q6ZT98 887 aa19.37■□□□□ 0.69
SRRT-201ENST00000423692 C16orf71Q8IYS4 520 aaPredicted RBP19.37■□□□□ 0.69
SRRT-201ENST00000423692 ZNF219Q9P2Y4 722 aaPredicted RBP19.37■□□□□ 0.69
SRRT-201ENST00000423692 SLX4Q8IY92 1834 aa19.37■□□□□ 0.69
SRRT-201ENST00000423692 ARFGEF2Q9Y6D5 1785 aa19.37■□□□□ 0.69
SRRT-201ENST00000423692 LRP10Q7Z4F1 713 aa19.36■□□□□ 0.69
SRRT-201ENST00000423692 NGEFQ8N5V2 710 aa19.36■□□□□ 0.69
SRRT-201ENST00000423692 MYL6BP14649 208 aa19.35■□□□□ 0.69
SRRT-201ENST00000423692 PDIA6Q15084 440 aa19.35■□□□□ 0.69
SRRT-201ENST00000423692 KIF6Q6ZMV9 814 aa19.35■□□□□ 0.69
SRRT-201ENST00000423692 NYXQ9GZU5 481 aa19.35■□□□□ 0.69
SRRT-201ENST00000423692 TAOK3Q9H2K8 898 aa19.35■□□□□ 0.69
SRRT-201ENST00000423692 TIAM2Q8IVF5 1701 aa19.34■□□□□ 0.69
SRRT-201ENST00000423692 IBTKQ9P2D0 1353 aaPredicted RBP19.34■□□□□ 0.69
SRRT-201ENST00000423692 RUNDC1Q96C34 613 aa19.34■□□□□ 0.69
SRRT-201ENST00000423692 FAM177BA6PVY3 158 aa19.33■□□□□ 0.68
SRRT-201ENST00000423692 VEGFAP15692 232 aaPredicted RBP19.33■□□□□ 0.68
SRRT-201ENST00000423692 CRY2Q49AN0 593 aa19.33■□□□□ 0.68
SRRT-201ENST00000423692 ERFEQ4G0M1 354 aa19.33■□□□□ 0.68
SRRT-201ENST00000423692 GIGYF2Q6Y7W6 1299 aaKnown RBP19.33■□□□□ 0.68
SRRT-201ENST00000423692 ZNF34Q8IZ26 560 aa19.33■□□□□ 0.68
SRRT-201ENST00000423692 PRKRIP1Q9H875 184 aaPredicted RBP19.33■□□□□ 0.68
SRRT-201ENST00000423692 TRIM35Q9UPQ4 493 aa19.33■□□□□ 0.68
SRRT-201ENST00000423692 RIC1Q4ADV7 1423 aa19.33■□□□□ 0.68
SRRT-201ENST00000423692 CHL1O00533 1208 aa19.32■□□□□ 0.68
SRRT-201ENST00000423692 WDR43Q15061 677 aaKnown RBP eCLIP19.32■□□□□ 0.68
SRRT-201ENST00000423692 CCDC93Q567U6 631 aa19.32■□□□□ 0.68
SRRT-201ENST00000423692 DPY19L2Q6NUT2 758 aa19.32■□□□□ 0.68
SRRT-201ENST00000423692 CCDC146Q8IYE0 955 aa19.32■□□□□ 0.68
SRRT-201ENST00000423692 DNAJC5GQ8N7S2 189 aa19.32■□□□□ 0.68
SRRT-201ENST00000423692 ZBTB3Q9H5J0 574 aa19.32■□□□□ 0.68
SRRT-201ENST00000423692 ADAMTS8Q9UP79 889 aa19.32■□□□□ 0.68
SRRT-201ENST00000423692 ABCC12Q96J65 1359 aa19.32■□□□□ 0.68
SRRT-201ENST00000423692 UBN2Q6ZU65 1347 aa19.31■□□□□ 0.68
SRRT-201ENST00000423692 CCDC88AQ3V6T2 1871 aa19.31■□□□□ 0.68
SRRT-201ENST00000423692 NUP98P52948 1817 aa19.31■□□□□ 0.68
SRRT-201ENST00000423692 POTECB2RU33 542 aa19.31■□□□□ 0.68
SRRT-201ENST00000423692 GTF2E1P29083 439 aaPredicted RBP19.31■□□□□ 0.68
SRRT-201ENST00000423692 ALDH1B1P30837 517 aa19.31■□□□□ 0.68
SRRT-201ENST00000423692 DICER1Q9UPY3 1922 aaKnown RBP19.31■□□□□ 0.68
SRRT-201ENST00000423692 SUSD4Q5VX71 490 aa19.3■□□□□ 0.68
SRRT-201ENST00000423692 NUTM1Q86Y26 1132 aa19.3■□□□□ 0.68
SRRT-201ENST00000423692 SMC1BQ8NDV3 1235 aa19.3■□□□□ 0.68
SRRT-201ENST00000423692 WDR90Q96KV7 1748 aa19.3■□□□□ 0.68
SRRT-201ENST00000423692 NTSR2O95665 410 aa19.29■□□□□ 0.68
SRRT-201ENST00000423692 EIF2S2P20042 333 aaKnown RBP19.29■□□□□ 0.68
SRRT-201ENST00000423692 GPTP24298 496 aa19.29■□□□□ 0.68
SRRT-201ENST00000423692 HOXA10P31260 410 aaPredicted RBP19.29■□□□□ 0.68
SRRT-201ENST00000423692 FKBP4Q02790 459 aaKnown RBP eCLIP19.29■□□□□ 0.68
SRRT-201ENST00000423692 NEUROD2Q15784 382 aa19.29■□□□□ 0.68
SRRT-201ENST00000423692 SNED1Q8TER0 1413 aa19.28■□□□□ 0.68
SRRT-201ENST00000423692 PROSER3Q2NL68 480 aa19.28■□□□□ 0.68
SRRT-201ENST00000423692 PARP10Q53GL7 1025 aa19.28■□□□□ 0.68
SRRT-201ENST00000423692 RTKN2Q8IZC4 609 aa19.28■□□□□ 0.68
SRRT-201ENST00000423692 CACNA1SQ13698 1873 aa19.28■□□□□ 0.68
SRRT-201ENST00000423692 OLFM4Q6UX06 510 aa19.26■□□□□ 0.67
SRRT-201ENST00000423692 PPP1R42Q7Z4L9 355 aa19.26■□□□□ 0.67
SRRT-201ENST00000423692 DDX21Q9NR30 783 aaKnown RBP eCLIP19.26■□□□□ 0.67
SRRT-201ENST00000423692 ANXA1P04083 346 aa19.25■□□□□ 0.67
SRRT-201ENST00000423692 HOXB7P09629 217 aa19.25■□□□□ 0.67
SRRT-201ENST00000423692 SLC10A5Q5PT55 438 aa19.25■□□□□ 0.67
SRRT-201ENST00000423692 DDNO94850 711 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms