RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 CCDC69A6NI79 296 aa12.48□□□□□ -0.41
SEMA4D-208ENST00000422704 CBX1P83916 185 aa12.48□□□□□ -0.41
SEMA4D-208ENST00000422704 HCLS1P14317 486 aaPredicted RBP12.48□□□□□ -0.41
SEMA4D-208ENST00000422704 SLC4A8Q2Y0W8 1093 aa12.48□□□□□ -0.41
SEMA4D-208ENST00000422704 A0A087WZG4 1122 aa12.48□□□□□ -0.41
SEMA4D-208ENST00000422704 FILIP1LQ4L180 1135 aa12.48□□□□□ -0.41
SEMA4D-208ENST00000422704 HSP90AA4PQ58FG1 418 aa12.48□□□□□ -0.41
SEMA4D-208ENST00000422704 METTL24Q5JXM2 366 aa12.48□□□□□ -0.41
SEMA4D-208ENST00000422704 DNAAF4Q8WXU2 420 aa12.48□□□□□ -0.41
SEMA4D-208ENST00000422704 C16orf45Q96MC5 204 aaPredicted RBP12.48□□□□□ -0.41
SEMA4D-208ENST00000422704 NCKAP5LQ9HCH0 1330 aa12.47□□□□□ -0.41
SEMA4D-208ENST00000422704 SDSP20132 328 aa12.47□□□□□ -0.41
SEMA4D-208ENST00000422704 AMOTL2Q9Y2J4 779 aa12.47□□□□□ -0.41
SEMA4D-208ENST00000422704 ERVK-7P63135 1459 aa12.47□□□□□ -0.41
SEMA4D-208ENST00000422704 CEP57L1Q8IYX8 460 aa12.47□□□□□ -0.41
SEMA4D-208ENST00000422704 JMYQ8N9B5 988 aa12.47□□□□□ -0.41
SEMA4D-208ENST00000422704 INSRP06213 1382 aa12.47□□□□□ -0.41
SEMA4D-208ENST00000422704 PER1O15534 1290 aaPredicted RBP12.47□□□□□ -0.41
SEMA4D-208ENST00000422704 CHRNA2Q15822 529 aa12.47□□□□□ -0.41
SEMA4D-208ENST00000422704 C8orf34Q49A92 452 aa12.47□□□□□ -0.41
SEMA4D-208ENST00000422704 GIMAP6Q6P9H5 292 aa12.47□□□□□ -0.41
SEMA4D-208ENST00000422704 UBE3BQ7Z3V4 1068 aa12.47□□□□□ -0.41
SEMA4D-208ENST00000422704 TRERF1Q96PN7 1200 aa12.47□□□□□ -0.41
SEMA4D-208ENST00000422704 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.47□□□□□ -0.41
SEMA4D-208ENST00000422704 CFAP45Q9UL16 551 aa12.47□□□□□ -0.41
SEMA4D-208ENST00000422704 ADGRB1O14514 1584 aa12.47□□□□□ -0.41
SEMA4D-208ENST00000422704 KRT18P05783 430 aaKnown RBP12.46□□□□□ -0.41
SEMA4D-208ENST00000422704 XRCC6P12956 609 aaKnown RBP eCLIP12.46□□□□□ -0.41
SEMA4D-208ENST00000422704 CDK5RAP3Q96JB5 506 aa12.46□□□□□ -0.41
SEMA4D-208ENST00000422704 UBAC1Q9BSL1 405 aa12.46□□□□□ -0.41
SEMA4D-208ENST00000422704 POLR3DP05423 398 aaPredicted RBP12.46□□□□□ -0.41
SEMA4D-208ENST00000422704 ALDH1L2Q3SY69 923 aa12.46□□□□□ -0.41
SEMA4D-208ENST00000422704 CPLX3Q8WVH0 158 aa12.46□□□□□ -0.41
SEMA4D-208ENST00000422704 WASLO00401 505 aaPredicted RBP12.46□□□□□ -0.42
SEMA4D-208ENST00000422704 FAM193AP78312 1265 aa12.46□□□□□ -0.42
SEMA4D-208ENST00000422704 TRMT1LQ7Z2T5 733 aaKnown RBP12.46□□□□□ -0.42
SEMA4D-208ENST00000422704 NACAP1Q9BZK3 213 aa12.46□□□□□ -0.42
SEMA4D-208ENST00000422704 TANGO6Q9C0B7 1094 aa12.46□□□□□ -0.42
SEMA4D-208ENST00000422704 TMEM131LA2VDJ0 1609 aa12.46□□□□□ -0.42
SEMA4D-208ENST00000422704 IFIT1P09914 478 aaKnown RBP12.46□□□□□ -0.42
SEMA4D-208ENST00000422704 BMP2KLQ5H9B9 411 aa12.46□□□□□ -0.42
SEMA4D-208ENST00000422704 PPFIBP1Q86W92 1011 aa12.46□□□□□ -0.42
SEMA4D-208ENST00000422704 CENPHQ9H3R5 247 aa12.46□□□□□ -0.42
SEMA4D-208ENST00000422704 ANKLE2Q86XL3 938 aa12.45□□□□□ -0.42
SEMA4D-208ENST00000422704 AIDAQ96BJ3 306 aa12.45□□□□□ -0.42
SEMA4D-208ENST00000422704 DMRT2Q9Y5R5 561 aa12.45□□□□□ -0.42
SEMA4D-208ENST00000422704 NPC1L1Q9UHC9 1359 aa12.45□□□□□ -0.42
SEMA4D-208ENST00000422704 GOLIM4O00461 696 aa12.45□□□□□ -0.42
SEMA4D-208ENST00000422704 DNA2P51530 1060 aa12.45□□□□□ -0.42
SEMA4D-208ENST00000422704 SLC39A6Q13433 755 aa12.45□□□□□ -0.42
SEMA4D-208ENST00000422704 PHACTR3Q96KR7 559 aa12.45□□□□□ -0.42
SEMA4D-208ENST00000422704 MYOM1P52179 1685 aa12.45□□□□□ -0.42
SEMA4D-208ENST00000422704 DDX46Q7L014 1031 aaKnown RBP12.45□□□□□ -0.42
SEMA4D-208ENST00000422704 SPATA31D1Q6ZQQ2 1576 aa12.44□□□□□ -0.42
SEMA4D-208ENST00000422704 TXLNAP40222 546 aa12.44□□□□□ -0.42
SEMA4D-208ENST00000422704 USP5P45974 858 aa12.44□□□□□ -0.42
SEMA4D-208ENST00000422704 ENOX2Q16206 610 aaKnown RBP12.44□□□□□ -0.42
SEMA4D-208ENST00000422704 MAP7D2Q96T17 732 aa12.44□□□□□ -0.42
SEMA4D-208ENST00000422704 LIMCH1Q9UPQ0 1083 aa12.44□□□□□ -0.42
SEMA4D-208ENST00000422704 ZSCAN31Q96LW9 406 aaPredicted RBP12.44□□□□□ -0.42
SEMA4D-208ENST00000422704 CLTCQ00610 1675 aaKnown RBP12.44□□□□□ -0.42
SEMA4D-208ENST00000422704 H0YHG0 523 aa12.44□□□□□ -0.42
SEMA4D-208ENST00000422704 PIP4K2BP78356 416 aa12.44□□□□□ -0.42
SEMA4D-208ENST00000422704 CARD14Q9BXL6 1004 aa12.44□□□□□ -0.42
SEMA4D-208ENST00000422704 MAP3K2Q9Y2U5 619 aa12.44□□□□□ -0.42
SEMA4D-208ENST00000422704 NOM1Q5C9Z4 860 aaKnown RBP12.44□□□□□ -0.42
SEMA4D-208ENST00000422704 TMX3Q96JJ7 454 aa12.44□□□□□ -0.42
SEMA4D-208ENST00000422704 PLEKHH1Q9ULM0 1364 aa12.43□□□□□ -0.42
SEMA4D-208ENST00000422704 GJB2P29033 226 aa12.43□□□□□ -0.42
SEMA4D-208ENST00000422704 ZGPATQ8N5A5 531 aaKnown RBP12.43□□□□□ -0.42
SEMA4D-208ENST00000422704 MAGEC2Q9UBF1 373 aaPredicted RBP12.43□□□□□ -0.42
SEMA4D-208ENST00000422704 ASXL1Q8IXJ9 1541 aa12.43□□□□□ -0.42
SEMA4D-208ENST00000422704 CCAR1Q8IX12 1150 aaKnown RBP12.43□□□□□ -0.42
SEMA4D-208ENST00000422704 DEF6Q9H4E7 631 aa12.43□□□□□ -0.42
SEMA4D-208ENST00000422704 PA2G4Q9UQ80 394 aaKnown RBP12.43□□□□□ -0.42
SEMA4D-208ENST00000422704 QRICH2Q9H0J4 1663 aa12.43□□□□□ -0.42
SEMA4D-208ENST00000422704 IQSEC3Q9UPP2 1182 aaPredicted RBP12.43□□□□□ -0.42
SEMA4D-208ENST00000422704 IMMTQ16891 758 aaKnown RBP12.42□□□□□ -0.42
SEMA4D-208ENST00000422704 ODF2Q5BJF6 829 aa12.42□□□□□ -0.42
SEMA4D-208ENST00000422704 LARP1Q6PKG0 1096 aaKnown RBP12.42□□□□□ -0.42
SEMA4D-208ENST00000422704 ZSCAN29Q8IWY8 852 aaPredicted RBP12.42□□□□□ -0.42
SEMA4D-208ENST00000422704 PDCL2Q8N4E4 241 aa12.42□□□□□ -0.42
SEMA4D-208ENST00000422704 PUS7Q96PZ0 661 aaKnown RBP12.42□□□□□ -0.42
SEMA4D-208ENST00000422704 RBM5P52756 815 aaKnown RBP eCLIP12.42□□□□□ -0.42
SEMA4D-208ENST00000422704 PKNOX2Q96KN3 472 aa12.42□□□□□ -0.42
SEMA4D-208ENST00000422704 ZSWIM4Q9H7M6 989 aa12.42□□□□□ -0.42
SEMA4D-208ENST00000422704 ECHDC1Q9NTX5 307 aa12.42□□□□□ -0.42
SEMA4D-208ENST00000422704 CFAP65Q6ZU64 1925 aaKnown RBP12.42□□□□□ -0.42
SEMA4D-208ENST00000422704 STX6O43752 255 aa12.42□□□□□ -0.42
SEMA4D-208ENST00000422704 URI1O94763 535 aaPredicted RBP12.42□□□□□ -0.42
SEMA4D-208ENST00000422704 ADAMTS2O95450 1211 aa12.42□□□□□ -0.42
SEMA4D-208ENST00000422704 SETQ01105 290 aaPredicted RBP12.42□□□□□ -0.42
SEMA4D-208ENST00000422704 C8orf76Q96K31 380 aa12.42□□□□□ -0.42
SEMA4D-208ENST00000422704 SPDYE4A6NLX3 237 aa12.41□□□□□ -0.42
SEMA4D-208ENST00000422704 ADCY5O95622 1261 aa12.41□□□□□ -0.42
SEMA4D-208ENST00000422704 CPA1P15085 419 aa12.41□□□□□ -0.42
SEMA4D-208ENST00000422704 KRT32Q14532 448 aa12.41□□□□□ -0.42
SEMA4D-208ENST00000422704 PHF8Q9UPP1 1060 aa12.41□□□□□ -0.42
SEMA4D-208ENST00000422704 U3KPZ7 1027 aaPredicted RBP12.41□□□□□ -0.42
SEMA4D-208ENST00000422704 MICU3Q86XE3 530 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms