RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 ZNF772Q68DY9 489 aaPredicted RBP7.15□□□□□ -1.26
CDC42EP3-202ENST00000422687 PDXDC2PQ6P474 469 aa7.15□□□□□ -1.26
CDC42EP3-202ENST00000422687 RGS22Q8NE09 1264 aa7.15□□□□□ -1.26
CDC42EP3-202ENST00000422687 TMEM131LA2VDJ0 1609 aa7.14□□□□□ -1.27
CDC42EP3-202ENST00000422687 USP17L3A6NCW0 530 aa7.14□□□□□ -1.27
CDC42EP3-202ENST00000422687 USP17L4A6NCW7 530 aa7.14□□□□□ -1.27
CDC42EP3-202ENST00000422687 SETD1AO15047 1707 aaKnown RBP7.14□□□□□ -1.27
CDC42EP3-202ENST00000422687 SH3BP2P78314 561 aa7.14□□□□□ -1.27
CDC42EP3-202ENST00000422687 CDCA8Q53HL2 280 aa7.14□□□□□ -1.27
CDC42EP3-202ENST00000422687 USP17L2Q6R6M4 530 aa7.14□□□□□ -1.27
CDC42EP3-202ENST00000422687 USP17L1Q7RTZ2 530 aa7.14□□□□□ -1.27
CDC42EP3-202ENST00000422687 FAM174AQ8TBP5 190 aa7.14□□□□□ -1.27
CDC42EP3-202ENST00000422687 C19orf44Q9H6X5 657 aa7.14□□□□□ -1.27
CDC42EP3-202ENST00000422687 VRTNQ9H8Y1 702 aa7.14□□□□□ -1.27
CDC42EP3-202ENST00000422687 ZMIZ1Q9ULJ6 1067 aa7.14□□□□□ -1.27
CDC42EP3-202ENST00000422687 SHPRHQ149N8 1683 aa7.13□□□□□ -1.27
CDC42EP3-202ENST00000422687 DIP2AQ14689 1571 aa7.13□□□□□ -1.27
CDC42EP3-202ENST00000422687 DCCP43146 1447 aa7.13□□□□□ -1.27
CDC42EP3-202ENST00000422687 ANKRD50Q9ULJ7 1429 aa7.13□□□□□ -1.27
CDC42EP3-202ENST00000422687 LOC105371045A0A1W2PR82 267 aa7.13□□□□□ -1.27
CDC42EP3-202ENST00000422687 USP17L5A8MUK1 530 aa7.13□□□□□ -1.27
CDC42EP3-202ENST00000422687 SIAH2O43255 324 aa7.13□□□□□ -1.27
CDC42EP3-202ENST00000422687 SMPD1P17405 629 aa7.13□□□□□ -1.27
CDC42EP3-202ENST00000422687 SMCPP49901 116 aaPredicted RBP7.13□□□□□ -1.27
CDC42EP3-202ENST00000422687 MFAP1P55081 439 aaKnown RBP7.13□□□□□ -1.27
CDC42EP3-202ENST00000422687 CTC1Q2NKJ3 1217 aa7.13□□□□□ -1.27
CDC42EP3-202ENST00000422687 ZNF511Q8NB15 262 aa7.13□□□□□ -1.27
CDC42EP3-202ENST00000422687 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.13□□□□□ -1.27
CDC42EP3-202ENST00000422687 ARMC2Q8NEN0 867 aa7.13□□□□□ -1.27
CDC42EP3-202ENST00000422687 ZNF592Q92610 1267 aa7.13□□□□□ -1.27
CDC42EP3-202ENST00000422687 CHIC2Q9UKJ5 165 aa7.13□□□□□ -1.27
CDC42EP3-202ENST00000422687 SETD5Q9C0A6 1442 aa7.12□□□□□ -1.27
CDC42EP3-202ENST00000422687 TTC24A2A3L6 582 aaPredicted RBP7.12□□□□□ -1.27
CDC42EP3-202ENST00000422687 CTHP32929 405 aa7.12□□□□□ -1.27
CDC42EP3-202ENST00000422687 MCCD1P59942 119 aaPredicted RBP7.12□□□□□ -1.27
CDC42EP3-202ENST00000422687 BRINP3Q76B58 766 aa7.12□□□□□ -1.27
CDC42EP3-202ENST00000422687 PHTF2Q8N3S3 785 aa7.12□□□□□ -1.27
CDC42EP3-202ENST00000422687 AAASQ9NRG9 546 aa7.12□□□□□ -1.27
CDC42EP3-202ENST00000422687 CEP126Q9P2H0 1117 aa7.12□□□□□ -1.27
CDC42EP3-202ENST00000422687 PTPRUQ92729 1446 aa7.11□□□□□ -1.27
CDC42EP3-202ENST00000422687 EP400Q96L91 3159 aa7.11□□□□□ -1.27
CDC42EP3-202ENST00000422687 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.11□□□□□ -1.27
CDC42EP3-202ENST00000422687 SKIP12755 728 aa7.11□□□□□ -1.27
CDC42EP3-202ENST00000422687 ATF3P18847 181 aa7.11□□□□□ -1.27
CDC42EP3-202ENST00000422687 RXRBP28702 533 aa7.11□□□□□ -1.27
CDC42EP3-202ENST00000422687 PTK2Q05397 1052 aa7.11□□□□□ -1.27
CDC42EP3-202ENST00000422687 NBPF14Q5TI25 921 aa7.11□□□□□ -1.27
CDC42EP3-202ENST00000422687 EHBP1Q8NDI1 1231 aa7.11□□□□□ -1.27
CDC42EP3-202ENST00000422687 BAP1Q92560 729 aa7.11□□□□□ -1.27
CDC42EP3-202ENST00000422687 GNEQ9Y223 722 aaKnown RBP7.11□□□□□ -1.27
CDC42EP3-202ENST00000422687 FAM196BA6NMK8 535 aa7.1□□□□□ -1.27
CDC42EP3-202ENST00000422687 J3QL48 77 aa7.1□□□□□ -1.27
CDC42EP3-202ENST00000422687 LINC01559Q495D7 138 aa7.1□□□□□ -1.27
CDC42EP3-202ENST00000422687 TMEM164Q5U3C3 297 aa7.1□□□□□ -1.27
CDC42EP3-202ENST00000422687 MPNDQ8N594 471 aa7.1□□□□□ -1.27
CDC42EP3-202ENST00000422687 TRIM52Q96A61 297 aa7.1□□□□□ -1.27
CDC42EP3-202ENST00000422687 AMOTL2Q9Y2J4 779 aa7.1□□□□□ -1.27
CDC42EP3-202ENST00000422687 MST1RQ04912 1400 aa7.1□□□□□ -1.27
CDC42EP3-202ENST00000422687 GCC2Q8IWJ2 1684 aa7.09□□□□□ -1.27
CDC42EP3-202ENST00000422687 AFF2P51816 1311 aa7.09□□□□□ -1.27
CDC42EP3-202ENST00000422687 UNC13BO14795 1591 aa7.09□□□□□ -1.27
CDC42EP3-202ENST00000422687 LZTS3O60299 673 aaPredicted RBP7.09□□□□□ -1.27
CDC42EP3-202ENST00000422687 VARSP26640 1264 aaKnown RBP7.09□□□□□ -1.27
CDC42EP3-202ENST00000422687 MEX3CQ5U5Q3 659 aaKnown RBP7.09□□□□□ -1.27
CDC42EP3-202ENST00000422687 SH3BP5LQ7L8J4 393 aa7.09□□□□□ -1.27
CDC42EP3-202ENST00000422687 STK32AQ8WU08 396 aa7.09□□□□□ -1.27
CDC42EP3-202ENST00000422687 NOVA2Q9UNW9 492 aaKnown RBP7.09□□□□□ -1.27
CDC42EP3-202ENST00000422687 TRPM2O94759 1503 aa7.09□□□□□ -1.27
CDC42EP3-202ENST00000422687 ASXL1Q8IXJ9 1541 aa7.09□□□□□ -1.27
CDC42EP3-202ENST00000422687 MYO5BQ9ULV0 1848 aa7.08□□□□□ -1.28
CDC42EP3-202ENST00000422687 XRN1Q8IZH2 1706 aaKnown RBP7.08□□□□□ -1.28
CDC42EP3-202ENST00000422687 USP17L15C9J2P7 530 aa7.08□□□□□ -1.28
CDC42EP3-202ENST00000422687 USP17L10C9JJH3 530 aa7.08□□□□□ -1.28
CDC42EP3-202ENST00000422687 USP17L13C9JLJ4 530 aa7.08□□□□□ -1.28
CDC42EP3-202ENST00000422687 USP17L12C9JPN9 530 aa7.08□□□□□ -1.28
CDC42EP3-202ENST00000422687 USP17L11C9JVI0 530 aa7.08□□□□□ -1.28
CDC42EP3-202ENST00000422687 USP17L21D6R901 530 aa7.08□□□□□ -1.28
CDC42EP3-202ENST00000422687 USP17L18D6R9N7 530 aa7.08□□□□□ -1.28
CDC42EP3-202ENST00000422687 USP17L22D6RA61 530 aa7.08□□□□□ -1.28
CDC42EP3-202ENST00000422687 USP17L17D6RBQ6 530 aa7.08□□□□□ -1.28
CDC42EP3-202ENST00000422687 USP17L19D6RCP7 530 aa7.08□□□□□ -1.28
CDC42EP3-202ENST00000422687 USP17L20D6RJB6 530 aa7.08□□□□□ -1.28
CDC42EP3-202ENST00000422687 ST8SIA5O15466 376 aa7.08□□□□□ -1.28
CDC42EP3-202ENST00000422687 USP17L24Q0WX57 530 aa7.08□□□□□ -1.28
CDC42EP3-202ENST00000422687 B4GALNT3Q6L9W6 998 aa7.08□□□□□ -1.28
CDC42EP3-202ENST00000422687 ADAM32Q8TC27 787 aa7.08□□□□□ -1.28
CDC42EP3-202ENST00000422687 MTMR7Q9Y216 660 aa7.08□□□□□ -1.28
CDC42EP3-202ENST00000422687 IVNS1ABPQ9Y6Y0 642 aa7.08□□□□□ -1.28
CDC42EP3-202ENST00000422687 RGS12O14924 1447 aa7.08□□□□□ -1.28
CDC42EP3-202ENST00000422687 SETBP1Q9Y6X0 1596 aa7.08□□□□□ -1.28
CDC42EP3-202ENST00000422687 ROCK1Q13464 1354 aa7.08□□□□□ -1.28
CDC42EP3-202ENST00000422687 PNPLA6Q8IY17 1366 aa7.08□□□□□ -1.28
CDC42EP3-202ENST00000422687 AXIN1O15169 862 aa7.07□□□□□ -1.28
CDC42EP3-202ENST00000422687 RBM6P78332 1123 aaKnown RBP7.07□□□□□ -1.28
CDC42EP3-202ENST00000422687 PTK7Q13308 1070 aa7.07□□□□□ -1.28
CDC42EP3-202ENST00000422687 SLFNL1Q499Z3 407 aa7.07□□□□□ -1.28
CDC42EP3-202ENST00000422687 CRTC2Q53ET0 693 aaPredicted RBP7.07□□□□□ -1.28
CDC42EP3-202ENST00000422687 SND1Q7KZF4 910 aaKnown RBP eCLIP7.07□□□□□ -1.28
CDC42EP3-202ENST00000422687 PLPP7Q8NBV4 271 aa7.07□□□□□ -1.28
CDC42EP3-202ENST00000422687 LRRC59Q96AG4 307 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms