RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 SYCE3A1L190 88 aa15.6■□□□□ 0.09
COL20A1-203ENST00000422202 ISM2Q6H9L7 571 aa15.6■□□□□ 0.09
COL20A1-203ENST00000422202 CCT2P78371 535 aaKnown RBP15.6■□□□□ 0.09
COL20A1-203ENST00000422202 CDCA7LQ96GN5 454 aa15.6■□□□□ 0.09
COL20A1-203ENST00000422202 YEATS4O95619 227 aa15.6■□□□□ 0.09
COL20A1-203ENST00000422202 ST5P78524 1137 aa15.6■□□□□ 0.09
COL20A1-203ENST00000422202 NCBP1Q09161 790 aaKnown RBP15.6■□□□□ 0.09
COL20A1-203ENST00000422202 ATP2B3Q16720 1220 aa15.6■□□□□ 0.09
COL20A1-203ENST00000422202 RFC4P35249 363 aa15.59■□□□□ 0.09
COL20A1-203ENST00000422202 MAP7D1Q3KQU3 841 aa15.59■□□□□ 0.09
COL20A1-203ENST00000422202 DAAM2Q86T65 1068 aa15.59■□□□□ 0.09
COL20A1-203ENST00000422202 KAT14Q9H8E8 782 aa15.59■□□□□ 0.09
COL20A1-203ENST00000422202 JADE2Q9NQC1 790 aa15.59■□□□□ 0.09
COL20A1-203ENST00000422202 ANO10Q9NW15 660 aa15.59■□□□□ 0.09
COL20A1-203ENST00000422202 GPTP24298 496 aa15.58■□□□□ 0.09
COL20A1-203ENST00000422202 IQCGQ9H095 443 aaKnown RBP15.58■□□□□ 0.09
COL20A1-203ENST00000422202 SNX16P57768 344 aa15.58■□□□□ 0.08
COL20A1-203ENST00000422202 ZNF710Q8N1W2 664 aa15.58■□□□□ 0.08
COL20A1-203ENST00000422202 FERMT3Q86UX7 667 aa15.58■□□□□ 0.08
COL20A1-203ENST00000422202 SIRT1Q96EB6 747 aa15.58■□□□□ 0.08
COL20A1-203ENST00000422202 TSPY2A6NKD2 308 aa15.58■□□□□ 0.08
COL20A1-203ENST00000422202 GOLGA8BA8MQT2 603 aa15.58■□□□□ 0.08
COL20A1-203ENST00000422202 TMEM110-MUSTN1A8MSY1 372 aa15.58■□□□□ 0.08
COL20A1-203ENST00000422202 IDEP14735 1019 aa15.58■□□□□ 0.08
COL20A1-203ENST00000422202 TRMT1Q9NXH9 659 aaKnown RBP15.58■□□□□ 0.08
COL20A1-203ENST00000422202 CFAP70Q5T0N1 1121 aa15.57■□□□□ 0.08
COL20A1-203ENST00000422202 KIF18AQ8NI77 898 aa15.57■□□□□ 0.08
COL20A1-203ENST00000422202 CCDC12Q8WUD4 166 aaPredicted RBP15.57■□□□□ 0.08
COL20A1-203ENST00000422202 BBXQ8WY36 941 aaPredicted RBP15.57■□□□□ 0.08
COL20A1-203ENST00000422202 GSTA5Q7RTV2 222 aa15.57■□□□□ 0.08
COL20A1-203ENST00000422202 PROCA1Q8NCQ7 364 aaPredicted RBP15.57■□□□□ 0.08
COL20A1-203ENST00000422202 SPECC1LQ69YQ0 1117 aa15.57■□□□□ 0.08
COL20A1-203ENST00000422202 EXOC6BQ9Y2D4 811 aa15.57■□□□□ 0.08
COL20A1-203ENST00000422202 MYOM3Q5VTT5 1437 aa15.57■□□□□ 0.08
COL20A1-203ENST00000422202 BAG3O95817 575 aa15.57■□□□□ 0.08
COL20A1-203ENST00000422202 TPD52P55327 224 aaPredicted RBP15.57■□□□□ 0.08
COL20A1-203ENST00000422202 DDX46Q7L014 1031 aaKnown RBP15.57■□□□□ 0.08
COL20A1-203ENST00000422202 PDCL2Q8N4E4 241 aa15.57■□□□□ 0.08
COL20A1-203ENST00000422202 SMC1BQ8NDV3 1235 aa15.57■□□□□ 0.08
COL20A1-203ENST00000422202 SETD1BQ9UPS6 1966 aaKnown RBP15.57■□□□□ 0.08
COL20A1-203ENST00000422202 KIF5BP33176 963 aa15.56■□□□□ 0.08
COL20A1-203ENST00000422202 TTC12Q9H892 705 aaPredicted RBP15.56■□□□□ 0.08
COL20A1-203ENST00000422202 GOLGA8AA7E2F4 631 aa15.56■□□□□ 0.08
COL20A1-203ENST00000422202 GPATCH11Q8N954 259 aa15.56■□□□□ 0.08
COL20A1-203ENST00000422202 RNF41Q9H4P4 317 aaPredicted RBP15.56■□□□□ 0.08
COL20A1-203ENST00000422202 SRRTQ9BXP5 876 aaKnown RBP15.56■□□□□ 0.08
COL20A1-203ENST00000422202 PPP2R1AP30153 589 aa15.56■□□□□ 0.08
COL20A1-203ENST00000422202 PDE4BQ07343 736 aa15.56■□□□□ 0.08
COL20A1-203ENST00000422202 KIAA0753Q2KHM9 967 aa15.56■□□□□ 0.08
COL20A1-203ENST00000422202 PRPF40BQ6NWY9 871 aaKnown RBP15.56■□□□□ 0.08
COL20A1-203ENST00000422202 GJC1P36383 396 aa15.56■□□□□ 0.08
COL20A1-203ENST00000422202 KIF1BPQ96EK5 621 aa15.56■□□□□ 0.08
COL20A1-203ENST00000422202 FAM107BQ9H098 131 aa15.56■□□□□ 0.08
COL20A1-203ENST00000422202 BRPF3Q9ULD4 1205 aa15.55■□□□□ 0.08
COL20A1-203ENST00000422202 FAM114A1Q8IWE2 563 aa15.55■□□□□ 0.08
COL20A1-203ENST00000422202 EXOC1Q9NV70 894 aa15.55■□□□□ 0.08
COL20A1-203ENST00000422202 UBAP1LF5GYI3 381 aa15.55■□□□□ 0.08
COL20A1-203ENST00000422202 TBCAO75347 108 aaKnown RBP15.55■□□□□ 0.08
COL20A1-203ENST00000422202 CEP135Q66GS9 1140 aa15.55■□□□□ 0.08
COL20A1-203ENST00000422202 FBF1Q8TES7 1133 aa15.55■□□□□ 0.08
COL20A1-203ENST00000422202 CLIP2Q9UDT6 1046 aa15.55■□□□□ 0.08
COL20A1-203ENST00000422202 F8W031 263 aaPredicted RBP15.55■□□□□ 0.08
COL20A1-203ENST00000422202 SMARCA5O60264 1052 aaPredicted RBP15.55■□□□□ 0.08
COL20A1-203ENST00000422202 TMEM67Q5HYA8 995 aa15.54■□□□□ 0.08
COL20A1-203ENST00000422202 CCDC155Q8N6L0 562 aa15.54■□□□□ 0.08
COL20A1-203ENST00000422202 SLC12A5Q9H2X9 1139 aa15.54■□□□□ 0.08
COL20A1-203ENST00000422202 ZFP91Q96JP5 570 aaPredicted RBP15.54■□□□□ 0.08
COL20A1-203ENST00000422202 MRVI1Q9Y6F6 885 aa15.54■□□□□ 0.08
COL20A1-203ENST00000422202 NAP1L3Q99457 506 aaPredicted RBP15.54■□□□□ 0.08
COL20A1-203ENST00000422202 CCDC117Q8IWD4 279 aaPredicted RBP15.54■□□□□ 0.08
COL20A1-203ENST00000422202 USHBP1Q8N6Y0 703 aa15.54■□□□□ 0.08
COL20A1-203ENST00000422202 HAUS7Q99871 368 aa15.54■□□□□ 0.08
COL20A1-203ENST00000422202 SCAPERQ9BY12 1400 aa15.54■□□□□ 0.08
COL20A1-203ENST00000422202 RAB11FIP3O75154 756 aa15.54■□□□□ 0.08
COL20A1-203ENST00000422202 BIRC2Q13490 618 aa15.54■□□□□ 0.08
COL20A1-203ENST00000422202 CCDC7Q96M83 1385 aa15.54■□□□□ 0.08
COL20A1-203ENST00000422202 IFI16Q16666 785 aaKnown RBP15.54■□□□□ 0.08
COL20A1-203ENST00000422202 STAC3Q96MF2 364 aa15.54■□□□□ 0.08
COL20A1-203ENST00000422202 IPO4Q8TEX9 1081 aaKnown RBP15.53■□□□□ 0.08
COL20A1-203ENST00000422202 BIN1O00499 593 aa15.53■□□□□ 0.08
COL20A1-203ENST00000422202 ATP2C2O75185 946 aa15.53■□□□□ 0.08
COL20A1-203ENST00000422202 CCDC6Q16204 474 aa15.53■□□□□ 0.08
COL20A1-203ENST00000422202 POGZQ7Z3K3 1410 aa15.53■□□□□ 0.08
COL20A1-203ENST00000422202 BRD4O60885 1362 aaPredicted RBP15.53■□□□□ 0.08
COL20A1-203ENST00000422202 CCDC8Q9H0W5 538 aaPredicted RBP15.53■□□□□ 0.08
COL20A1-203ENST00000422202 HSF2BPO75031 334 aa15.53■□□□□ 0.08
COL20A1-203ENST00000422202 SATB1Q01826 763 aa15.53■□□□□ 0.08
COL20A1-203ENST00000422202 AKNAD1Q5T1N1 836 aa15.53■□□□□ 0.08
COL20A1-203ENST00000422202 LARP6Q9BRS8 491 aaKnown RBP15.53■□□□□ 0.08
COL20A1-203ENST00000422202 CEP112Q8N8E3 955 aa15.53■□□□□ 0.08
COL20A1-203ENST00000422202 ZNF644Q9H582 1327 aaPredicted RBP15.52■□□□□ 0.08
COL20A1-203ENST00000422202 MVPQ14764 893 aaKnown RBP15.52■□□□□ 0.08
COL20A1-203ENST00000422202 PANK2Q9BZ23 570 aa15.52■□□□□ 0.08
COL20A1-203ENST00000422202 CCDC172P0C7W6 258 aa15.52■□□□□ 0.08
COL20A1-203ENST00000422202 EEF2P13639 858 aaKnown RBP15.52■□□□□ 0.08
COL20A1-203ENST00000422202 HMGB1P09429 215 aaKnown RBP15.52■□□□□ 0.08
COL20A1-203ENST00000422202 TSPY3P0CV98 308 aa15.52■□□□□ 0.08
COL20A1-203ENST00000422202 TSPY8P0CW00 308 aa15.52■□□□□ 0.08
COL20A1-203ENST00000422202 ANAPC4Q9UJX5 808 aa15.52■□□□□ 0.07
COL20A1-203ENST00000422202 TTC36A6NLP5 189 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms