RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 MICALL1Q8N3F8 863 aa14.24□□□□□ -0.13
CLCN4-203ENST00000421085 EHBP1L1Q8N3D4 1523 aa14.24□□□□□ -0.13
CLCN4-203ENST00000421085 IFIT1P09914 478 aaKnown RBP14.24□□□□□ -0.13
CLCN4-203ENST00000421085 FAM200AQ8TCP9 573 aa14.24□□□□□ -0.13
CLCN4-203ENST00000421085 RTEL1-TNFRSF6BF6WH68 1400 aa14.24□□□□□ -0.13
CLCN4-203ENST00000421085 CAPN2P17655 700 aa14.24□□□□□ -0.13
CLCN4-203ENST00000421085 C8orf34Q49A92 452 aa14.24□□□□□ -0.13
CLCN4-203ENST00000421085 TSHZ3Q63HK5 1081 aa14.24□□□□□ -0.13
CLCN4-203ENST00000421085 CEP63Q96MT8 703 aa14.24□□□□□ -0.13
CLCN4-203ENST00000421085 MINDY4BA8MYZ0 360 aa14.24□□□□□ -0.13
CLCN4-203ENST00000421085 CTAGE15A4D2H0 777 aa14.23□□□□□ -0.13
CLCN4-203ENST00000421085 ZNF213O14771 459 aa14.23□□□□□ -0.13
CLCN4-203ENST00000421085 CTAGE8P0CG41 777 aa14.23□□□□□ -0.13
CLCN4-203ENST00000421085 CTAGE6Q86UF2 777 aa14.23□□□□□ -0.13
CLCN4-203ENST00000421085 CTAGE4Q8IX94 777 aa14.23□□□□□ -0.13
CLCN4-203ENST00000421085 TAOK3Q9H2K8 898 aa14.23□□□□□ -0.13
CLCN4-203ENST00000421085 PPFIA3O75145 1194 aa14.23□□□□□ -0.13
CLCN4-203ENST00000421085 IRX3P78415 501 aaPredicted RBP14.23□□□□□ -0.13
CLCN4-203ENST00000421085 UBA5Q9GZZ9 404 aa14.23□□□□□ -0.13
CLCN4-203ENST00000421085 DESP17661 470 aa14.23□□□□□ -0.13
CLCN4-203ENST00000421085 LARP1Q6PKG0 1096 aaKnown RBP14.23□□□□□ -0.13
CLCN4-203ENST00000421085 KRI1Q8N9T8 703 aaKnown RBP14.23□□□□□ -0.13
CLCN4-203ENST00000421085 EVI5LQ96CN4 794 aa14.23□□□□□ -0.13
CLCN4-203ENST00000421085 ATAD2Q6PL18 1390 aa14.22□□□□□ -0.13
CLCN4-203ENST00000421085 GOLGA8AA7E2F4 631 aa14.22□□□□□ -0.13
CLCN4-203ENST00000421085 NUCB1Q02818 461 aa14.22□□□□□ -0.13
CLCN4-203ENST00000421085 PRPF4BQ13523 1007 aaKnown RBP14.22□□□□□ -0.13
CLCN4-203ENST00000421085 HS1BP3Q53T59 392 aa14.22□□□□□ -0.13
CLCN4-203ENST00000421085 NAPBQ9H115 298 aa14.22□□□□□ -0.13
CLCN4-203ENST00000421085 METTL24Q5JXM2 366 aa14.22□□□□□ -0.13
CLCN4-203ENST00000421085 ABCF2Q9UG63 623 aa14.22□□□□□ -0.13
CLCN4-203ENST00000421085 CCDC102BQ68D86 513 aa14.22□□□□□ -0.13
CLCN4-203ENST00000421085 MACROD2A1Z1Q3 448 aa14.22□□□□□ -0.13
CLCN4-203ENST00000421085 TAF7Q15545 349 aaPredicted RBP14.22□□□□□ -0.13
CLCN4-203ENST00000421085 SEC63Q9UGP8 760 aaKnown RBP14.22□□□□□ -0.13
CLCN4-203ENST00000421085 AKAP2Q9Y2D5 859 aa14.22□□□□□ -0.13
CLCN4-203ENST00000421085 NOP2P46087 812 aaKnown RBP14.21□□□□□ -0.13
CLCN4-203ENST00000421085 CKAP4Q07065 602 aaKnown RBP14.21□□□□□ -0.13
CLCN4-203ENST00000421085 TTC31Q49AM3 519 aaPredicted RBP14.21□□□□□ -0.13
CLCN4-203ENST00000421085 NECAB1Q8N987 351 aa14.21□□□□□ -0.13
CLCN4-203ENST00000421085 EHBP1Q8NDI1 1231 aa14.21□□□□□ -0.13
CLCN4-203ENST00000421085 DNAJC25Q9H1X3 360 aa14.21□□□□□ -0.13
CLCN4-203ENST00000421085 TIAM1Q13009 1591 aa14.21□□□□□ -0.13
CLCN4-203ENST00000421085 DAPK1P53355 1430 aa14.21□□□□□ -0.13
CLCN4-203ENST00000421085 ZSCAN16Q9H4T2 348 aaPredicted RBP14.21□□□□□ -0.14
CLCN4-203ENST00000421085 OGFRQ9NZT2 677 aa14.21□□□□□ -0.14
CLCN4-203ENST00000421085 USP16Q9Y5T5 823 aa14.21□□□□□ -0.14
CLCN4-203ENST00000421085 STAMBPO95630 424 aa14.21□□□□□ -0.14
CLCN4-203ENST00000421085 SMAP1Q8IYB5 467 aaPredicted RBP14.21□□□□□ -0.14
CLCN4-203ENST00000421085 SNX21Q969T3 373 aa14.2□□□□□ -0.14
CLCN4-203ENST00000421085 ZBTB9Q96C00 473 aa14.2□□□□□ -0.14
CLCN4-203ENST00000421085 STRN4Q9NRL3 753 aa14.2□□□□□ -0.14
CLCN4-203ENST00000421085 N4BP3O15049 544 aa14.2□□□□□ -0.14
CLCN4-203ENST00000421085 ANAPC15P60006 121 aa14.2□□□□□ -0.14
CLCN4-203ENST00000421085 HSP90AA4PQ58FG1 418 aa14.2□□□□□ -0.14
CLCN4-203ENST00000421085 VPS18Q9P253 973 aa14.2□□□□□ -0.14
CLCN4-203ENST00000421085 HOOK3Q86VS8 718 aa14.2□□□□□ -0.14
CLCN4-203ENST00000421085 NEBLO76041 1014 aa14.2□□□□□ -0.14
CLCN4-203ENST00000421085 AOPEPQ8N6M6 819 aa14.2□□□□□ -0.14
CLCN4-203ENST00000421085 CTCFLQ8NI51 663 aaPredicted RBP14.2□□□□□ -0.14
CLCN4-203ENST00000421085 NEK1Q96PY6 1258 aa14.2□□□□□ -0.14
CLCN4-203ENST00000421085 IFIT3O14879 490 aaKnown RBP14.2□□□□□ -0.14
CLCN4-203ENST00000421085 NLRP5P59047 1200 aa14.2□□□□□ -0.14
CLCN4-203ENST00000421085 CCDC144CPQ8IYA2 1237 aa14.2□□□□□ -0.14
CLCN4-203ENST00000421085 C10orf67Q8IYJ2 551 aa14.2□□□□□ -0.14
CLCN4-203ENST00000421085 ATRIPQ8WXE1 791 aa14.2□□□□□ -0.14
CLCN4-203ENST00000421085 DACT1Q9NYF0 836 aa14.2□□□□□ -0.14
CLCN4-203ENST00000421085 GOLGA1Q92805 767 aa14.19□□□□□ -0.14
CLCN4-203ENST00000421085 ORC3Q9UBD5 711 aaPredicted RBP14.19□□□□□ -0.14
CLCN4-203ENST00000421085 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.19□□□□□ -0.14
CLCN4-203ENST00000421085 MYO1BO43795 1136 aa14.19□□□□□ -0.14
CLCN4-203ENST00000421085 SDSP20132 328 aa14.19□□□□□ -0.14
CLCN4-203ENST00000421085 SYT1P21579 422 aa14.19□□□□□ -0.14
CLCN4-203ENST00000421085 KANK3Q6NY19 840 aa14.19□□□□□ -0.14
CLCN4-203ENST00000421085 MYD88Q99836 296 aa14.19□□□□□ -0.14
CLCN4-203ENST00000421085 NCOA1Q15788 1441 aa14.19□□□□□ -0.14
CLCN4-203ENST00000421085 PTGS1P23219 599 aa14.19□□□□□ -0.14
CLCN4-203ENST00000421085 SYKP43405 635 aa14.19□□□□□ -0.14
CLCN4-203ENST00000421085 RAB3GAP1Q15042 981 aa14.19□□□□□ -0.14
CLCN4-203ENST00000421085 RRAGDQ9NQL2 400 aaPredicted RBP14.19□□□□□ -0.14
CLCN4-203ENST00000421085 HDAC1Q13547 482 aaPredicted RBP14.19□□□□□ -0.14
CLCN4-203ENST00000421085 ECHDC1Q9NTX5 307 aa14.19□□□□□ -0.14
CLCN4-203ENST00000421085 NAIPQ13075 1403 aa14.19□□□□□ -0.14
CLCN4-203ENST00000421085 PTPRCP08575 1304 aa14.18□□□□□ -0.14
CLCN4-203ENST00000421085 PCDHB15Q9Y5E8 787 aa14.18□□□□□ -0.14
CLCN4-203ENST00000421085 RANBP6O60518 1105 aaKnown RBP14.18□□□□□ -0.14
CLCN4-203ENST00000421085 MSL1Q68DK7 614 aa14.18□□□□□ -0.14
CLCN4-203ENST00000421085 CEP57Q86XR8 500 aa14.18□□□□□ -0.14
CLCN4-203ENST00000421085 RAB11FIP4Q86YS3 637 aa14.18□□□□□ -0.14
CLCN4-203ENST00000421085 CCDC194A0A1B0GVG4 234 aa14.18□□□□□ -0.14
CLCN4-203ENST00000421085 CCDC40Q4G0X9 1142 aa14.18□□□□□ -0.14
CLCN4-203ENST00000421085 FAM114A1Q8IWE2 563 aa14.18□□□□□ -0.14
CLCN4-203ENST00000421085 IARSP41252 1262 aaKnown RBP14.18□□□□□ -0.14
CLCN4-203ENST00000421085 RBM5P52756 815 aaKnown RBP eCLIP14.18□□□□□ -0.14
CLCN4-203ENST00000421085 DNM1Q05193 864 aaKnown RBP14.18□□□□□ -0.14
CLCN4-203ENST00000421085 FBF1Q8TES7 1133 aa14.18□□□□□ -0.14
CLCN4-203ENST00000421085 FEZ1Q99689 392 aa14.18□□□□□ -0.14
CLCN4-203ENST00000421085 RAB34Q9BZG1 259 aa14.18□□□□□ -0.14
CLCN4-203ENST00000421085 OPA1O60313 960 aa14.17□□□□□ -0.14
CLCN4-203ENST00000421085 TMEM266Q2M3C6 531 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms