RNA–Protein interactions for RNA: ENST00000420881.6

PCDH19-203, Transcript of protocadherin 19, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH19, Length 7,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-203ENST00000420881 INPP5BP32019 993 aa10.62□□□□□ -0.71
PCDH19-203ENST00000420881 IRX4P78413 519 aa10.62□□□□□ -0.71
PCDH19-203ENST00000420881 MTMR7Q9Y216 660 aa10.62□□□□□ -0.71
PCDH19-203ENST00000420881 SATB1Q01826 763 aa10.62□□□□□ -0.71
PCDH19-203ENST00000420881 KANK3Q6NY19 840 aa10.62□□□□□ -0.71
PCDH19-203ENST00000420881 RPAINQ86UA6 219 aa10.62□□□□□ -0.71
PCDH19-203ENST00000420881 GNL3LQ9NVN8 582 aaKnown RBP10.62□□□□□ -0.71
PCDH19-203ENST00000420881 ATP6V1AP38606 617 aa10.62□□□□□ -0.71
PCDH19-203ENST00000420881 GBP5Q96PP8 586 aa10.62□□□□□ -0.71
PCDH19-203ENST00000420881 ZEB2O60315 1214 aa10.62□□□□□ -0.71
PCDH19-203ENST00000420881 DNAJC8O75937 253 aaPredicted RBP10.62□□□□□ -0.71
PCDH19-203ENST00000420881 TRHP20396 242 aaPredicted RBP10.62□□□□□ -0.71
PCDH19-203ENST00000420881 SEPT8Q92599 483 aa10.62□□□□□ -0.71
PCDH19-203ENST00000420881 FERMT2Q96AC1 680 aa10.62□□□□□ -0.71
PCDH19-203ENST00000420881 SURF6O75683 361 aaKnown RBP10.61□□□□□ -0.71
PCDH19-203ENST00000420881 USP25Q9UHP3 1055 aa10.61□□□□□ -0.71
PCDH19-203ENST00000420881 CCDC144AA2RUR9 1427 aa10.61□□□□□ -0.71
PCDH19-203ENST00000420881 LUC7L3O95232 432 aaKnown RBP10.61□□□□□ -0.71
PCDH19-203ENST00000420881 TRPC3Q13507 836 aa10.61□□□□□ -0.71
PCDH19-203ENST00000420881 CCDC170Q8IYT3 715 aa10.61□□□□□ -0.71
PCDH19-203ENST00000420881 GABPB1Q06547 395 aaPredicted RBP10.61□□□□□ -0.71
PCDH19-203ENST00000420881 CTAGE1Q96RT6 745 aa10.61□□□□□ -0.71
PCDH19-203ENST00000420881 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.61□□□□□ -0.71
PCDH19-203ENST00000420881 NOLC1Q14978 699 aaKnown RBP eCLIP10.61□□□□□ -0.71
PCDH19-203ENST00000420881 CCDC30Q5VVM6 783 aa10.61□□□□□ -0.71
PCDH19-203ENST00000420881 RNF10Q8N5U6 811 aaKnown RBP10.61□□□□□ -0.71
PCDH19-203ENST00000420881 SEC62Q99442 399 aaKnown RBP10.61□□□□□ -0.71
PCDH19-203ENST00000420881 SH2B1Q9NRF2 756 aaPredicted RBP10.61□□□□□ -0.71
PCDH19-203ENST00000420881 SPATS2LQ9NUQ6 558 aaKnown RBP10.61□□□□□ -0.71
PCDH19-203ENST00000420881 DNA2P51530 1060 aa10.61□□□□□ -0.71
PCDH19-203ENST00000420881 BRD2P25440 801 aaKnown RBP10.6□□□□□ -0.71
PCDH19-203ENST00000420881 CCDC96Q2M329 555 aa10.6□□□□□ -0.71
PCDH19-203ENST00000420881 ERCC3P19447 782 aa10.6□□□□□ -0.71
PCDH19-203ENST00000420881 TTC39AQ5SRH9 613 aa10.6□□□□□ -0.71
PCDH19-203ENST00000420881 KIAA1524Q8TCG1 905 aa10.6□□□□□ -0.71
PCDH19-203ENST00000420881 VCX3AQ9NNX9 186 aa10.6□□□□□ -0.71
PCDH19-203ENST00000420881 TNIP1Q15025 636 aa10.6□□□□□ -0.71
PCDH19-203ENST00000420881 ZNF622Q969S3 477 aaKnown RBP eCLIP10.6□□□□□ -0.71
PCDH19-203ENST00000420881 CCDC40Q4G0X9 1142 aa10.6□□□□□ -0.71
PCDH19-203ENST00000420881 RLBP1P12271 317 aa10.6□□□□□ -0.71
PCDH19-203ENST00000420881 CYLC1P35663 651 aaPredicted RBP10.6□□□□□ -0.71
PCDH19-203ENST00000420881 NECTIN2Q92692 538 aa10.6□□□□□ -0.71
PCDH19-203ENST00000420881 CNGA1P29973 690 aa10.6□□□□□ -0.71
PCDH19-203ENST00000420881 PSMD1Q99460 953 aa10.59□□□□□ -0.71
PCDH19-203ENST00000420881 ST20-MTHFSA0A0A6YYL1 179 aa10.59□□□□□ -0.71
PCDH19-203ENST00000420881 RUFY3Q7L099 469 aa10.59□□□□□ -0.71
PCDH19-203ENST00000420881 SELENOSQ9BQE4 189 aa10.59□□□□□ -0.71
PCDH19-203ENST00000420881 PFDN1O60925 122 aa10.59□□□□□ -0.71
PCDH19-203ENST00000420881 CFAP157Q5JU67 520 aa10.59□□□□□ -0.71
PCDH19-203ENST00000420881 ATP2A2P16615 1042 aaKnown RBP10.59□□□□□ -0.71
PCDH19-203ENST00000420881 AFAP1L1Q8TED9 768 aa10.59□□□□□ -0.71
PCDH19-203ENST00000420881 RAB3IPQ96QF0 476 aaPredicted RBP10.59□□□□□ -0.71
PCDH19-203ENST00000420881 THEGQ9P2T0 379 aa10.59□□□□□ -0.71
PCDH19-203ENST00000420881 EID1Q9Y6B2 187 aa10.59□□□□□ -0.71
PCDH19-203ENST00000420881 CNTLNQ9NXG0 1405 aa10.59□□□□□ -0.71
PCDH19-203ENST00000420881 VAV2P52735 878 aa10.59□□□□□ -0.71
PCDH19-203ENST00000420881 CNNM3Q8NE01 707 aa10.59□□□□□ -0.71
PCDH19-203ENST00000420881 HVCN1Q96D96 273 aa10.59□□□□□ -0.71
PCDH19-203ENST00000420881 RASSF2P50749 326 aa10.59□□□□□ -0.71
PCDH19-203ENST00000420881 PPP4R3AQ6IN85 833 aa10.59□□□□□ -0.71
PCDH19-203ENST00000420881 UBE2HP62256 183 aa10.58□□□□□ -0.72
PCDH19-203ENST00000420881 AMPD3Q01432 767 aa10.58□□□□□ -0.72
PCDH19-203ENST00000420881 CCDC144CPQ8IYA2 1237 aa10.58□□□□□ -0.72
PCDH19-203ENST00000420881 CCDC7Q96M83 1385 aa10.58□□□□□ -0.72
PCDH19-203ENST00000420881 ZNF76P36508 570 aa10.58□□□□□ -0.72
PCDH19-203ENST00000420881 CCDC14Q49A88 953 aa10.58□□□□□ -0.72
PCDH19-203ENST00000420881 CCDC63Q8NA47 563 aa10.58□□□□□ -0.72
PCDH19-203ENST00000420881 CCDC196A0A1B0GTZ2 297 aa10.58□□□□□ -0.72
PCDH19-203ENST00000420881 GIGYF1O75420 1035 aaPredicted RBP10.58□□□□□ -0.72
PCDH19-203ENST00000420881 CHD1LQ86WJ1 897 aa10.58□□□□□ -0.72
PCDH19-203ENST00000420881 UBAC1Q9BSL1 405 aa10.58□□□□□ -0.72
PCDH19-203ENST00000420881 EIF2AQ9BY44 585 aaKnown RBP10.58□□□□□ -0.72
PCDH19-203ENST00000420881 TMX1Q9H3N1 280 aa10.58□□□□□ -0.72
PCDH19-203ENST00000420881 CHMP2AO43633 222 aa10.58□□□□□ -0.72
PCDH19-203ENST00000420881 CASTP20810 708 aaKnown RBP10.58□□□□□ -0.72
PCDH19-203ENST00000420881 EVA1CP58658 441 aa10.58□□□□□ -0.72
PCDH19-203ENST00000420881 FYB2Q5VWT5 728 aa10.58□□□□□ -0.72
PCDH19-203ENST00000420881 JAKMIP1Q96N16 626 aaKnown RBP10.58□□□□□ -0.72
PCDH19-203ENST00000420881 TRIM4Q9C037 500 aa10.58□□□□□ -0.72
PCDH19-203ENST00000420881 BICDL2A1A5D9 508 aa10.58□□□□□ -0.72
PCDH19-203ENST00000420881 RNF8O76064 485 aa10.58□□□□□ -0.72
PCDH19-203ENST00000420881 CCT4P50991 539 aaKnown RBP10.58□□□□□ -0.72
PCDH19-203ENST00000420881 TBC1D5Q92609 795 aa10.58□□□□□ -0.72
PCDH19-203ENST00000420881 AKAP2Q9Y2D5 859 aa10.58□□□□□ -0.72
PCDH19-203ENST00000420881 NDC80O14777 642 aa10.58□□□□□ -0.72
PCDH19-203ENST00000420881 MTIF2P46199 727 aaKnown RBP10.58□□□□□ -0.72
PCDH19-203ENST00000420881 PDCD7Q8N8D1 485 aaKnown RBP10.58□□□□□ -0.72
PCDH19-203ENST00000420881 BCAP29Q9UHQ4 241 aa10.58□□□□□ -0.72
PCDH19-203ENST00000420881 CETN3O15182 167 aa10.57□□□□□ -0.72
PCDH19-203ENST00000420881 VPS52Q8N1B4 723 aa10.57□□□□□ -0.72
PCDH19-203ENST00000420881 SPAG5Q96R06 1193 aa10.57□□□□□ -0.72
PCDH19-203ENST00000420881 MIA2Q96PC5 1412 aa10.57□□□□□ -0.72
PCDH19-203ENST00000420881 SPTY2D1Q68D10 685 aaPredicted RBP10.57□□□□□ -0.72
PCDH19-203ENST00000420881 FLIIQ13045 1269 aa10.57□□□□□ -0.72
PCDH19-203ENST00000420881 LMBR1Q8WVP7 490 aa10.57□□□□□ -0.72
PCDH19-203ENST00000420881 CCDC62Q6P9F0 684 aa10.57□□□□□ -0.72
PCDH19-203ENST00000420881 TSGA10Q9BZW7 698 aa10.57□□□□□ -0.72
PCDH19-203ENST00000420881 ZSWIM4Q9H7M6 989 aa10.57□□□□□ -0.72
PCDH19-203ENST00000420881 LARSQ9P2J5 1176 aaKnown RBP10.57□□□□□ -0.72
PCDH19-203ENST00000420881 SLC8A1P32418 973 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms